You are here

Home

CAN33_45650-T1, CAN33_45650-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45650-T1
Unique NameCAN33_45650-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2134376..2136464+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45650-T1 ID=CAN33_45650-T1|Name=CAN33_45650-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2089bp|location=Sequence derived from alignment at NKJJ01000022.1:2134376..2136464+ (Aspergillus niger FDAARGOS_311)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
AGTCCAGATCTCGGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAACTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAGCTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCACGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTCGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATCTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACACTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGTCCCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCC
GATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTC
ACAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGGTAAGCTGTACTCGA
CATTCCTTTTCTAACATATCCCTGACTAACCATGACACAGCGCGTGGAAT
TGCTCAATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGAC
ATCGACAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAA
GTTGGACGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAG
ACGACCAGTCGGCGGCGAATCTGTCGAAGCTGCTGCAAAGAGCTCACCAA
TGGAAGCAGCAACAGCAACAACAGGGGGATGGAGCATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2134376..2136464+

>CAN33_45650-T1 ID=CAN33_45650-T1|Name=CAN33_45650-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5931bp|location=Sequence derived from alignment at NKJJ01000022.1:2134376..2136464+ (Aspergillus niger FDAARGOS_311)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
AGTCCAGATCTCGGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAACTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAGCTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCACGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTCGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATCTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACACTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCACAAGGT
GTTCAAGGAGAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTCAATGCTT
GGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGACATCGACAAGATC
GAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGGACGACGA
TCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAGACGACCAGTCGG
CGGCGAATCTGTCGAAGCTGCTGCAAAGAGCTCACCAATGGAAGCAGCAA
CAGCAACAACAGGGGGATGGAGCATAGATGGAGTCGTCACGCGGCCCTCC
CAGGGTCAAGAACAAGGCTGCGGCGCCAGTCCAGATCTCGGCGGAGCAGC
TGCTTCGCGAGGCCGTGGACCGGCAGGAGCCCGCATTGCAGGCGCCGACG
CAGCGCTTTGCCGACCTGGAAGAACTGCACGAATACCAGGGCCGCAAGCG
AAAAGAGTTCGAAGACTATGTGCGTCGGAACCGAATTAACATGAACAACT
GGATGCGCTATGCGGCATGGGAGCTGGAGCAAAAGGAGTTCCGCCGGGCG
CGTTCAATCTTTGAACGGGCGCTGGACGTCAGCCCGACCTCGGTGGTTCT
GTGGATTCGGTACATCGAGTCGGAGATGCGGAATCGCAACATCAATCATG
CCAGGAACTTGCTCGACCGTGCGGTGACGATCTTGCCTCGGGTGGATAAG
CTGTGGTACAAGTATGTCTACATGGAGGAGACACTGGGCAACATTGCGGG
TACACGACAGGTCTTTGAGCGGTGGATGTCTTGGGAGCCGGAAGAGGGAG
CTTGGAGCGCCTATATCAAGCTGGAAAAGCGGTACAATGAGTTCGAGAGG
GCGCGCGCGATCTTCCAGCGGTTCACCATTGTTCACCCTGAACCACGCAA
TTGGATCAAGTGGGCTCGGTTTGAAGAGGAGTATGGAACGAGCGATCTCG
TGCGGGAGGTGTATGGAATGGCGATTGAGACTCTGGGAGAGGATTTCATG
GACGAGAAGCTCTTCATCGGCTATGCCAAGTTCGAGGCGAAGTTGAAGGA
GTACGAACGTGCCCGGGCGATTTACAAGTATGCCTTAGACCGACTTCCTC
GCTCAAAGTCCACGGCCCTTCACAAGTCCTATACAACATTCGAGAAACAA
TATGGTGACCGGGAAGGCGTTGAGGATGTTATTCTCTCAAAACGCAGAGT
CCAGTACGAGGAGCAACTGAAAGAGAACTCGCGGAACTACGACATATGGT
TCGACTTTGCCCGGCTCGAGGAAACCTCGGGTGACCCCGACCGAGTACGC
GACATCTACGAACGCGCAATCGCTCAGATACCACCATCGCAGGAGAAGCG
GCACTGGAGACGGTATATCTACCTGTGGGTATTCTACGCCATTTGGGAGG
AAATGGAAGCCAAGGACGCCGAGCGTGCGCGCCAAATCTACAACGAGTGT
CTCAAGTTGATTCCCCACAAAAAGTTCACCTTTGCCAAGATCTGGCTCCT
GAAGGCGCAGTTTGAGATCCGTCAGATGAATCTCCAAGCCGCTCGTAAGA
CGCTTGGCCAGGCCATCGGCATGTGCCCGAAGGATAAACTCTTCCGGGGA
TACATTGATCTAGAGCGCCAGCTGTTCGAGTTCGTGCGGTGCCGGACACT
GTTCGAAAAGCAGATCGAGTGGAATCCTTCCAACAGCCAGTCATGGATCA
AGTATGCCGAATTGGAGCGCGGGCTGGACGACACCGACCGTGCACGAGCC
ATCTACGAGCTTGGAATTGACCAGCCGACACTCGATATGCCCGAGTTGGT
GTGGAAGTCGTACATTGACTTTGAGGAGTACGAAGGCGAATACGACCGGG
TCCGCCAGCTCTACGAGCGTCTGCTGGAGAAGACAGATCACGTCAAGGTG
TGGATTAACTACGCCCGCTTCGAGATCAACGATGCCAAGCGTCGTGCTCG
GGCCGTTTTCGAACGAGCTCACAAGGTGTTCAAGGAGAAGGAGCTCAAGG
AAGAGCGCGTGGAATTGCTCAATGCTTGGCGGTCATTCGAGCACACGCAC
GGTTCACCAGAAGACATCGACAAGATCGAGAAACAGATGCCCCGGCGAGT
CAAGAAGCGGCGCAAGTTGGACGACGATCGGTACGAGGAGTACATGGATT
ACGTATTCCCAGCAGACGACCAGTCGGCGGCGAATCTGTCGAAGCTGCTG
CAAAGAGCTCACCAATGGAAGCAGCAACAGCAACAACAGGGGGATGGAGC
ATAGATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGG
CGCCAGTCCAGATCTCGGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGG
CAGGAGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGA
ACTGCACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGC
GTCGGAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAG
CTGGAGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCT
GGACGTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGG
AGATGCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCG
GTGACGATCTTGCCTCGGGTGGATAAGCTGTGGTACAAGTATGTCTACAT
GGAGGAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGT
GGATGTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTG
GAAAAGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTT
CACCATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTG
AAGAGGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCG
ATTGAGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTA
TGCCAAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTT
ACAAGTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCACGGCCCTTCAC
AAGTCCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGA
GGATGTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAG
AGAACTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTCGAGGAA
ACCTCGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGC
TCAGATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACC
TGTGGGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAG
CGTGCGCGCCAAATCTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAA
GTTCACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTC
AGATGAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATG
TGCCCGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCT
GTTCGAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGA
ATCCTTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGG
CTGGACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCA
GCCGACACTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTG
AGGAGTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTG
CTGGAGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGA
GATCAACGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCACA
AGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTCAAT
GCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGACATCGACAA
GATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGGACG
ACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAGACGACCAG
TCGGCGGCGAATCTGTCGAAGCTGCTGCAAAGAGCTCACCAATGGAAGCA
GCAACAGCAACAACAGGGGGATGGAGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CLF1CAN33_45650Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45650-T1.exon1CAN33_45650-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_45650-T1.exon2CAN33_45650-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45650-T1.exon3CAN33_45650-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45650-T1.cdsCAN33_45650-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45650-T1CAN33_45650-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR003107
DBxrefPFAM:PF02184
ProductNineTeen Complex (NTC) component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2134376..2136464 +
Powered by Drupal