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CAN33_45705-T1, CAN33_45705-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45705-T1
Unique NameCAN33_45705-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2176556..2177787+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45705-T1 ID=CAN33_45705-T1|Name=CAN33_45705-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1232bp|location=Sequence derived from alignment at NKJJ01000022.1:2176556..2177787+ (Aspergillus niger FDAARGOS_311)
ATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACAT
GTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACA
TGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAAT
ACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTC
CACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACA
CCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGC
AACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCT
AGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGA
GCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGC
CAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATAC
GCGAGAAAAGCCCTTCTATTGCGCTCTACCAGGTAAGTTTCCCCAGACCT
TCCCCGTTATAAGTTCCTTTCTTGTTATCCCTTGGCAGCGTCTAACATTG
TTCCTTGATATTTGCCTATAGAATGCGACCGCAGCTTCACTCGATCAGAT
GCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAGGCGCTTCGTCC
CTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTCGGCGGCAGGAA
CGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGAAGCTGAAGCTA
TCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAAAGTGCCAATGA
GGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCCTGGTGGGTTGG
AGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCCCGCAACTGTAT
CGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGATGGCGCGGAGCT
ACGCGACGCATGGGAAAAGATTCGCGTCAAGAGAAAGGAATCTTGGATGG
AGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGGTACGATTGTTC
AAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCGCCGGCAAATGG
GACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGTAGATGTTGCAC
AAGACCAGGGGTCTGGATCTGTTCCTCCATGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2176556..2177787+

>CAN33_45705-T1 ID=CAN33_45705-T1|Name=CAN33_45705-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2286bp|location=Sequence derived from alignment at NKJJ01000022.1:2176556..2177787+ (Aspergillus niger FDAARGOS_311)
ATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACAT
GTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACA
TGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAAT
ACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTC
CACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACA
CCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGC
AACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCT
AGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGA
GCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGC
CAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATAC
GCGAGAAAAGCCCTTCTATTGCGCTCTACCAGAATGCGACCGCAGCTTCA
CTCGATCAGATGCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAG
GCGCTTCGTCCCTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTC
GGCGGCAGGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGA
AGCTGAAGCTATCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAA
AGTGCCAATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCC
TGGTGGGTTGGAGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCC
CGCAACTGTATCGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGAT
GGCGCGGAGCTACGCGACGCATGGGAAAAGATTCGCGTCAAGAGAAAGGA
ATCTTGGATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGG
TACGATTGTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCG
CCGGCAAATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGT
AGATGTTGCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGAATGACGG
AATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACATGTCGGAT
CGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACATGCCTCC
CTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAATACTCCCG
TCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTCCACCTCC
ATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACACCCTCGC
TCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGCAACGATC
AAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCTAGGCAAC
ATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGAGCCGACA
GAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGCCAAACGC
ACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATACGCGAGAA
AAGCCCTTCTATTGCGCTCTACCAGAATGCGACCGCAGCTTCACTCGATC
AGATGCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAGGCGCTTC
GTCCCTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTCGGCGGCA
GGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGAAGCTGAA
GCTATCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAAAGTGCCA
ATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCCTGGTGGG
TTGGAGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCCCGCAACT
GTATCGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGATGGCGCGG
AGCTACGCGACGCATGGGAAAAGATTCGCGTCAAGAGAAAGGAATCTTGG
ATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGGTACGATT
GTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCGCCGGCAA
ATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGTAGATGTT
GCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45705CAN33_45705Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45705-T1.exon1CAN33_45705-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_45705-T1.exon2CAN33_45705-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45705-T1.cdsCAN33_45705-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45705-T1CAN33_45705-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF13912
DBxrefPFAM:PF00096
ProductZinc-finger double domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2176556..2177787 +
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