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CAN33_45735-T1, CAN33_45735-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45735-T1
Unique NameCAN33_45735-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2198287..2198814-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45735-T1 ID=CAN33_45735-T1|Name=CAN33_45735-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=528bp|location=Sequence derived from alignment at NKJJ01000022.1:2198287..2198814- (Aspergillus niger FDAARGOS_311)
ATGTCGAATCCCACCGCGACCCAGGACACCAAGGCCGAGCCTACCCAACA
GCCACAGCAACAGAAGCCCCCCGTGCTGGAAGAAGATGACGAGTTTGAGG
ACTTCCCCGTTGAAGGTTAGCCACAAACCACACAGACCGCTGGTCTTTCC
TGTCATGCAGAAGAGGGAGCTTCGCTCCGCCCAGACAGCCGGCAAAAATG
ATCTTACGGAGGACGGGTTGCGCTGACCTCGGAGCTTTAATTGCAGACTG
GCCTCAGGAGGAAACCGAACAAGGATCTGCTGCCAACGGCGCAAGCGCTC
ATTTGTGGGAGGAGAGCTGGGATGATGACGATGCGGCCGAGGACTTCTCG
AAGCAACTGAAGTACGTTTTCCCAAGCCAAGCCAAACCGAATCAAAACTC
ATCAGTCAATGCGATGAGCGCAATATGTTGCCATTGATCTACACCTCATC
TAAAGCTCAAATTGGACTAACATGTTTGCTTCGAACTACAGAGAGGAGCT
GAAGAAGGTCGGGGCGTCTAATCAATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2198287..2198814-

>CAN33_45735-T1 ID=CAN33_45735-T1|Name=CAN33_45735-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=801bp|location=Sequence derived from alignment at NKJJ01000022.1:2198287..2198814- (Aspergillus niger FDAARGOS_311)
AGAGGAGCTGAAGAAGGTCGGGGCGTCTAATCAATAGACTGGCCTCAGGA
GGAAACCGAACAAGGATCTGCTGCCAACGGCGCAAGCGCTCATTTGTGGG
AGGAGAGCTGGGATGATGACGATGCGGCCGAGGACTTCTCGAAGCAACTG
AAATGTCGAATCCCACCGCGACCCAGGACACCAAGGCCGAGCCTACCCAA
CAGCCACAGCAACAGAAGCCCCCCGTGCTGGAAGAAGATGACGAGTTTGA
GGACTTCCCCGTTGAAGAGAGGAGCTGAAGAAGGTCGGGGCGTCTAATCA
ATAGACTGGCCTCAGGAGGAAACCGAACAAGGATCTGCTGCCAACGGCGC
AAGCGCTCATTTGTGGGAGGAGAGCTGGGATGATGACGATGCGGCCGAGG
ACTTCTCGAAGCAACTGAAATGTCGAATCCCACCGCGACCCAGGACACCA
AGGCCGAGCCTACCCAACAGCCACAGCAACAGAAGCCCCCCGTGCTGGAA
GAAGATGACGAGTTTGAGGACTTCCCCGTTGAAGAGAGGAGCTGAAGAAG
GTCGGGGCGTCTAATCAATAGACTGGCCTCAGGAGGAAACCGAACAAGGA
TCTGCTGCCAACGGCGCAAGCGCTCATTTGTGGGAGGAGAGCTGGGATGA
TGACGATGCGGCCGAGGACTTCTCGAAGCAACTGAAATGTCGAATCCCAC
CGCGACCCAGGACACCAAGGCCGAGCCTACCCAACAGCCACAGCAACAGA
AGCCCCCCGTGCTGGAAGAAGATGACGAGTTTGAGGACTTCCCCGTTGAA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008541proteasome regulatory particle, lid subcomplex
Vocabulary: Biological Process
TermDefinition
GO:0043248proteasome assembly
GO:0006406mRNA export from nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45735CAN33_45735Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45735-T1CAN33_45735-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45735-T1.cdsCAN33_45735-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45735-T1.exon3CAN33_45735-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45735-T1.exon2CAN33_45735-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45735-T1.exon1CAN33_45735-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.4
DBxrefInterPro:IPR007834
DBxrefPFAM:PF05160
ProductDSS1/SEM1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2198287..2198814 -
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