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CAN33_45765-T1, CAN33_45765-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45765-T1
Unique NameCAN33_45765-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2242241..2243513-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45765-T1 ID=CAN33_45765-T1|Name=CAN33_45765-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1273bp|location=Sequence derived from alignment at NKJJ01000022.1:2242241..2243513- (Aspergillus niger FDAARGOS_311)
ATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTCCGGG
CCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGTGAGCAATTCAAACG
GCAAAATAATATATGTGATGACGGGTAGGTGAAGTGCATGTACTGATGCT
CTTCGTAACAGGGTGTCTCGGGCCTGACAAGTAGGGATATTAAGCTGTTT
GTTGATGCTGGATACAACACTGTTGAGTCGGTTGCATATACGTACGTCTA
TCCTTTGCCAGTCTGCTTCCGTGCCATCGCCCCTTTTTCAGTTCTGCTCA
CAAGCATGTTCTTGATTATGGTACAGGCCAAAACGTTTGTTGGAACAAAT
CAAGGGTATTTCGGAACAGAAAGCCACGAAAGTCCTGGTTGAGGGTGAGT
ATTGCTCTTGTGGCATTGGAACTCGTTCGCGAGGATCTTGTCTGACTCAA
TGAATTTGTAGCTATGAAGCTTGTACCGATGGGCTTTACCACCGCGACCG
AAATGCATGCGCGACGAAACGAACTTATCTCAATTACGACAGGCTCGAAA
CAGTTAGACACCCTTCTTGGAGGTGGCATTGAGACAGGCTCTATCACAGA
GATCTTTGGAGAATTCAGGACAGGAAAAAGTCAGATATGTCATACACTCG
CTGTGACTTGCCAATTGCCTTTTGATATGGGCGGAGGAGAAGGAAAATGC
CTATACATTGACACAGAAGGTACCTTCCGACCAGTGCGTCTGTTGGCGGT
TGCACAGCGATACGGGCTGGTGGGAGAGGAGGTGCTGGATAATGTGGCAT
ACGCTCGTGCGTACAACTCAGACCATCAACTTCAGCTACTCAACCAAGCT
TCTCAGATGATGTGTGAGACTCGGTTCTCGCTCCTTGTCGTTGATTCTGC
CACTTCTCTGTACCGGACGGACTTCAACGGCCGTGGTGAATTGTCGTCGA
GACAAACACATCTCGCGAAGTTCATGCGTACTCTGCAGCGCCTCGCTGAT
GAGTTTGGTATTGCGGTCGTCATTACGAACCAGGTCGTTGCCCAGGTGGA
TGGTGGCCCGAGTGCAATGTTCAATCCCGATCCAAAGAAGCCAATCGGTG
GTAACATTATTGCGCATGCAAGTACGACGCGGCTAAGTTTGAAGAAAGGA
CGGGGCGAGACTCGGGTCTGTAAGATCTACGATAGCCCATGTCTCCCTGA
GAGCGATTGTTTGTTCGCTATTAATGAGGATGGTATCGGGGACCCGAACC
CCAAGGACTTGGAGAATGACTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2242241..2243513-

>CAN33_45765-T1 ID=CAN33_45765-T1|Name=CAN33_45765-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4176bp|location=Sequence derived from alignment at NKJJ01000022.1:2242241..2243513- (Aspergillus niger FDAARGOS_311)
CTATGAAGCTTGTACCGATGGGCTTTACCACCGCGACCGAAATGCATGCG
CGACGAAACGAACTTATCTCAATTACGACAGGCTCGAAACAGTTAGACAC
CCTTCTTGGAGGTGGCATTGAGACAGGCTCTATCACAGAGATCTTTGGAG
AATTCAGGACAGGAAAAAGTCAGATATGTCATACACTCGCTGTGACTTGC
CAATTGCCTTTTGATATGGGCGGAGGAGAAGGAAAATGCCTATACATTGA
CACAGAAGGTACCTTCCGACCAGTGCGTCTGTTGGCGGTTGCACAGCGAT
ACGGGCTGGTGGGAGAGGAGGTGCTGGATAATGTGGCATACGCTCGTGCG
TACAACTCAGACCATCAACTTCAGCTACTCAACCAAGCTTCTCAGATGAT
GTGTGAGACTCGGTTCTCGCTCCTTGTCGTTGATTCTGCCACTTCTCTGT
ACCGGACGGACTTCAACGGCCGTGGTGAATTGTCGTCGAGACAAACACAT
CTCGCGAAGTTCATGCGTACTCTGCAGCGCCTCGCTGATGAGTTTGGTAT
TGCGGTCGTCATTACGAACCAGGTCGTTGCCCAGGTGGATGGTGGCCCGA
GTGCAATGTTCAATCCCGATCCAAAGAAGCCAATCGGTGGTAACATTATT
GCGCATGCAAGTACGACGCGGCTAAGTTTGAAGAAAGGACGGGGCGAGAC
TCGGGTCTGTAAGATCTACGATAGCCCATGTCTCCCTGAGAGCGATTGTT
TGTTCGCTATTAATGAGGATGGTATCGGGGACCCGAACCCCAAGGACTTG
GAGAATGACTGAGCCAAAACGTTTGTTGGAACAAATCAAGGGTATTTCGG
AACAGAAAGCCACGAAAGTCCTGGTTGAGGGGTGTCTCGGGCCTGACAAG
TAGGGATATTAAGCTGTTTGTTGATGCTGGATACAACACTGTTGAGTCGG
TTGCATATACATGACTGCCGACACCGATACTCAGAATGAGTACGACGATG
GGCTTCCGGGCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGCTATGA
AGCTTGTACCGATGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGA
AACGAACTTATCTCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCT
TGGAGGTGGCATTGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCA
GGACAGGAAAAAGTCAGATATGTCATACACTCGCTGTGACTTGCCAATTG
CCTTTTGATATGGGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGA
AGGTACCTTCCGACCAGTGCGTCTGTTGGCGGTTGCACAGCGATACGGGC
TGGTGGGAGAGGAGGTGCTGGATAATGTGGCATACGCTCGTGCGTACAAC
TCAGACCATCAACTTCAGCTACTCAACCAAGCTTCTCAGATGATGTGTGA
GACTCGGTTCTCGCTCCTTGTCGTTGATTCTGCCACTTCTCTGTACCGGA
CGGACTTCAACGGCCGTGGTGAATTGTCGTCGAGACAAACACATCTCGCG
AAGTTCATGCGTACTCTGCAGCGCCTCGCTGATGAGTTTGGTATTGCGGT
CGTCATTACGAACCAGGTCGTTGCCCAGGTGGATGGTGGCCCGAGTGCAA
TGTTCAATCCCGATCCAAAGAAGCCAATCGGTGGTAACATTATTGCGCAT
GCAAGTACGACGCGGCTAAGTTTGAAGAAAGGACGGGGCGAGACTCGGGT
CTGTAAGATCTACGATAGCCCATGTCTCCCTGAGAGCGATTGTTTGTTCG
CTATTAATGAGGATGGTATCGGGGACCCGAACCCCAAGGACTTGGAGAAT
GACTGAGCCAAAACGTTTGTTGGAACAAATCAAGGGTATTTCGGAACAGA
AAGCCACGAAAGTCCTGGTTGAGGGGTGTCTCGGGCCTGACAAGTAGGGA
TATTAAGCTGTTTGTTGATGCTGGATACAACACTGTTGAGTCGGTTGCAT
ATACATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTC
CGGGCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGCTATGAAGCTTG
TACCGATGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAA
CTTATCTCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGG
TGGCATTGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAG
GAAAAAGTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTT
GATATGGGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGGTAC
CTTCCGACCAGTGCGTCTGTTGGCGGTTGCACAGCGATACGGGCTGGTGG
GAGAGGAGGTGCTGGATAATGTGGCATACGCTCGTGCGTACAACTCAGAC
CATCAACTTCAGCTACTCAACCAAGCTTCTCAGATGATGTGTGAGACTCG
GTTCTCGCTCCTTGTCGTTGATTCTGCCACTTCTCTGTACCGGACGGACT
TCAACGGCCGTGGTGAATTGTCGTCGAGACAAACACATCTCGCGAAGTTC
ATGCGTACTCTGCAGCGCCTCGCTGATGAGTTTGGTATTGCGGTCGTCAT
TACGAACCAGGTCGTTGCCCAGGTGGATGGTGGCCCGAGTGCAATGTTCA
ATCCCGATCCAAAGAAGCCAATCGGTGGTAACATTATTGCGCATGCAAGT
ACGACGCGGCTAAGTTTGAAGAAAGGACGGGGCGAGACTCGGGTCTGTAA
GATCTACGATAGCCCATGTCTCCCTGAGAGCGATTGTTTGTTCGCTATTA
ATGAGGATGGTATCGGGGACCCGAACCCCAAGGACTTGGAGAATGACTGA
GCCAAAACGTTTGTTGGAACAAATCAAGGGTATTTCGGAACAGAAAGCCA
CGAAAGTCCTGGTTGAGGGGTGTCTCGGGCCTGACAAGTAGGGATATTAA
GCTGTTTGTTGATGCTGGATACAACACTGTTGAGTCGGTTGCATATACAT
GACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTCCGGGCC
CCGGAGCGCCCACGCCACTCTCTTCCCTGGAGCTATGAAGCTTGTACCGA
TGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAACTTATC
TCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTGGCAT
TGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGAAAAA
GTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGATATG
GGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGGTACCTTCCG
ACCAGTGCGTCTGTTGGCGGTTGCACAGCGATACGGGCTGGTGGGAGAGG
AGGTGCTGGATAATGTGGCATACGCTCGTGCGTACAACTCAGACCATCAA
CTTCAGCTACTCAACCAAGCTTCTCAGATGATGTGTGAGACTCGGTTCTC
GCTCCTTGTCGTTGATTCTGCCACTTCTCTGTACCGGACGGACTTCAACG
GCCGTGGTGAATTGTCGTCGAGACAAACACATCTCGCGAAGTTCATGCGT
ACTCTGCAGCGCCTCGCTGATGAGTTTGGTATTGCGGTCGTCATTACGAA
CCAGGTCGTTGCCCAGGTGGATGGTGGCCCGAGTGCAATGTTCAATCCCG
ATCCAAAGAAGCCAATCGGTGGTAACATTATTGCGCATGCAAGTACGACG
CGGCTAAGTTTGAAGAAAGGACGGGGCGAGACTCGGGTCTGTAAGATCTA
CGATAGCCCATGTCTCCCTGAGAGCGATTGTTTGTTCGCTATTAATGAGG
ATGGTATCGGGGACCCGAACCCCAAGGACTTGGAGAATGACTGAGCCAAA
ACGTTTGTTGGAACAAATCAAGGGTATTTCGGAACAGAAAGCCACGAAAG
TCCTGGTTGAGGGGTGTCTCGGGCCTGACAAGTAGGGATATTAAGCTGTT
TGTTGATGCTGGATACAACACTGTTGAGTCGGTTGCATATACATGACTGC
CGACACCGATACTCAGAATGAGTACGACGATGGGCTTCCGGGCCCCGGAG
CGCCCACGCCACTCTCTTCCCTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003697single-stranded DNA binding
GO:0000150recombinase activity
GO:0003690double-stranded DNA binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006281DNA repair
GO:1990426mitotic recombination-dependent replication fork processing
GO:0000724double-strand break repair via homologous recombination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHP51CAN33_45765Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45765-T1CAN33_45765-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45765-T1.cdsCAN33_45765-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45765-T1.exon4CAN33_45765-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_45765-T1.exon3CAN33_45765-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45765-T1.exon2CAN33_45765-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45765-T1.exon1CAN33_45765-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.4
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR010995
DBxrefInterPro:IPR033925
DBxrefInterPro:IPR020587
DBxrefInterPro:IPR020588
DBxrefInterPro:IPR016467
DBxrefInterPro:IPR011941
DBxrefInterPro:IPR013632
DBxrefInterPro:IPR003593
DBxrefPFAM:PF00154
DBxrefPFAM:PF08423
DBxrefPFAM:PF14520
DBxrefPFAM:PF13481
ProductRecA recombinase Rhp51
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2242241..2243513 -
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