You are here

Home

CAN33_4595-T1, CAN33_4595-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4595-T1
Unique NameCAN33_4595-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:539429..540695+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4595-T1 ID=CAN33_4595-T1|Name=CAN33_4595-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1267bp|location=Sequence derived from alignment at NKJJ01000019.1:539429..540695+ (Aspergillus niger FDAARGOS_311)
ATGGCCTTTGTGGGAACTAGCATGGCCAGCCCGGTCACAGCCATAAATGA
GGTAGTCGACATCACCGGAGAGGCATTCCAGGAAAATGAGGCTTGCCAGG
TCGAAAAGGCCGCTCCAGAGCCAGAGCATGTGGTATTCGATCCGTCCAAG
CATCTCGCTTTTGTGCCTCCTTCGCAGGTCCACACGATGAACGAGCTCGG
CTACCCTAACAATCGTGGAGTTTCCCCTGTTGGCGTCTCCGAGCCATTCT
CACTATTTTCGGTCGAAGCTGTGGAGCACATGCGTAAGGAAGTTCTCACC
AGTGAGGTTTATGCCAAGCATAAGTACTCGAGTGAGATTGCCGAATGTCA
GCTAAGGGGCTATGCAGCTGAGTAAATATCGAAGCTTTCATCCCATCTGA
AGCCATGACTGACACATAGGAACAGGTGCGCTCCATTTGTTTATGACGCT
TGGAAAAATCCTGAAACACTTGCGATAATCTCCAAAGTCGCCGGTGTCGA
TCTCGTCCCGGTTATGGACTTCGAACTGGGCCATGTAAACATTTCTGGTC
ACAATGAAGAGGAGAAGCATGAAGCCGTGAAGGAAGCCGGGGTATTGGGT
AAGGGTATTGCCGTGAAGCCCAGCAACGATGATGCCATAGTCGACTGGCA
CACTGACAGCTACCCCTTCGTTTGTGTGACAATGCTATCCGACTGTACCA
ATATGATCGGTGGAGAAACGGCCCTTAGAACGGGCAACGGCGATATTGTC
AAAGTCAGGGGACCGCAGAAGGTAAGTACATGACAATTAGATCTTAATAG
CTCAAGCTTATGAGTTGTCCTAGGGTTCGGCAGTCATCCTACAAGGCCGG
TATATCGAGCACAAAGCTCTCCGTGCTTTGGGGGCGACCGAGCGAATTAC
CATGGTGACTTCCTTCCGGCCTCGGGCTTCGTCCATCAAGGACGACACCG
TGCTTACCACCGTCCGCCCAATATCGGACCTCAATGAATTGTATCATCAG
TTCACTGAATATCGATTCGAAATCCTTGGCGATCGTCTCCGTGACGTCAA
TAAACTTATGCGAGACCAGAAGCGAGCCCGGCGCACTTTTGATACGCGTG
CTGCGAAACTCTTCATTCGTGAGCAGATCGATTTTTTGGAACATATGAAT
AAAGAGATCGTGGACGACGAAAAAGTGATCAAGGGAGTGATTGATGATAG
TCACCTTGTGTCAGAGGATCTGAAGCTAGAGCGTTCCCGGAAGCGGGCGC
TCGCAGATGTCGAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:539429..540695+

>CAN33_4595-T1 ID=CAN33_4595-T1|Name=CAN33_4595-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3483bp|location=Sequence derived from alignment at NKJJ01000019.1:539429..540695+ (Aspergillus niger FDAARGOS_311)
ATGGCCTTTGTGGGAACTAGCATGGCCAGCCCGGTCACAGCCATAAATGA
GGTAGTCGACATCACCGGAGAGGCATTCCAGGAAAATGAGGCTTGCCAGG
TCGAAAAGGCCGCTCCAGAGCCAGAGCATGTGGTATTCGATCCGTCCAAG
CATCTCGCTTTTGTGCCTCCTTCGCAGGTCCACACGATGAACGAGCTCGG
CTACCCTAACAATCGTGGAGTTTCCCCTGTTGGCGTCTCCGAGCCATTCT
CACTATTTTCGGTCGAAGCTGTGGAGCACATGCGTAAGGAAGTTCTCACC
AGTGAGGTTTATGCCAAGCATAAGTACTCGAGTGAGATTGCCGAATGTCA
GCTAAGGGGCTATGCAGCTGAGTGCGCTCCATTTGTTTATGACGCTTGGA
AAAATCCTGAAACACTTGCGATAATCTCCAAAGTCGCCGGTGTCGATCTC
GTCCCGGTTATGGACTTCGAACTGGGCCATGTAAACATTTCTGGTCACAA
TGAAGAGGAGAAGCATGAAGCCGTGAAGGAAGCCGGGGTATTGGGTAAGG
GTATTGCCGTGAAGCCCAGCAACGATGATGCCATAGTCGACTGGCACACT
GACAGCTACCCCTTCGTTTGTGTGACAATGCTATCCGACTGTACCAATAT
GATCGGTGGAGAAACGGCCCTTAGAACGGGCAACGGCGATATTGTCAAAG
TCAGGGGACCGCAGAAGGGTTCGGCAGTCATCCTACAAGGCCGGTATATC
GAGCACAAAGCTCTCCGTGCTTTGGGGGCGACCGAGCGAATTACCATGGT
GACTTCCTTCCGGCCTCGGGCTTCGTCCATCAAGGACGACACCGTGCTTA
CCACCGTCCGCCCAATATCGGACCTCAATGAATTGTATCATCAGTTCACT
GAATATCGATTCGAAATCCTTGGCGATCGTCTCCGTGACGTCAATAAACT
TATGCGAGACCAGAAGCGAGCCCGGCGCACTTTTGATACGCGTGCTGCGA
AACTCTTCATTCGTGAGCAGATCGATTTTTTGGAACATATGAATAAAGAG
ATCGTGGACGACGAAAAAGTGATCAAGGGAGTGATTGATGATAGTCACCT
TGTGTCAGAGGATCTGAAGCTAGAGCGTTCCCGGAAGCGGGCGCTCGCAG
ATGTCGAGTAGATGGCCTTTGTGGGAACTAGCATGGCCAGCCCGGTCACA
GCCATAAATGAGGTAGTCGACATCACCGGAGAGGCATTCCAGGAAAATGA
GGCTTGCCAGGTCGAAAAGGCCGCTCCAGAGCCAGAGCATGTGGTATTCG
ATCCGTCCAAGCATCTCGCTTTTGTGCCTCCTTCGCAGGTCCACACGATG
AACGAGCTCGGCTACCCTAACAATCGTGGAGTTTCCCCTGTTGGCGTCTC
CGAGCCATTCTCACTATTTTCGGTCGAAGCTGTGGAGCACATGCGTAAGG
AAGTTCTCACCAGTGAGGTTTATGCCAAGCATAAGTACTCGAGTGAGATT
GCCGAATGTCAGCTAAGGGGCTATGCAGCTGAGTGCGCTCCATTTGTTTA
TGACGCTTGGAAAAATCCTGAAACACTTGCGATAATCTCCAAAGTCGCCG
GTGTCGATCTCGTCCCGGTTATGGACTTCGAACTGGGCCATGTAAACATT
TCTGGTCACAATGAAGAGGAGAAGCATGAAGCCGTGAAGGAAGCCGGGGT
ATTGGGTAAGGGTATTGCCGTGAAGCCCAGCAACGATGATGCCATAGTCG
ACTGGCACACTGACAGCTACCCCTTCGTTTGTGTGACAATGCTATCCGAC
TGTACCAATATGATCGGTGGAGAAACGGCCCTTAGAACGGGCAACGGCGA
TATTGTCAAAGTCAGGGGACCGCAGAAGGGTTCGGCAGTCATCCTACAAG
GCCGGTATATCGAGCACAAAGCTCTCCGTGCTTTGGGGGCGACCGAGCGA
ATTACCATGGTGACTTCCTTCCGGCCTCGGGCTTCGTCCATCAAGGACGA
CACCGTGCTTACCACCGTCCGCCCAATATCGGACCTCAATGAATTGTATC
ATCAGTTCACTGAATATCGATTCGAAATCCTTGGCGATCGTCTCCGTGAC
GTCAATAAACTTATGCGAGACCAGAAGCGAGCCCGGCGCACTTTTGATAC
GCGTGCTGCGAAACTCTTCATTCGTGAGCAGATCGATTTTTTGGAACATA
TGAATAAAGAGATCGTGGACGACGAAAAAGTGATCAAGGGAGTGATTGAT
GATAGTCACCTTGTGTCAGAGGATCTGAAGCTAGAGCGTTCCCGGAAGCG
GGCGCTCGCAGATGTCGAGTAGATGGCCTTTGTGGGAACTAGCATGGCCA
GCCCGGTCACAGCCATAAATGAGGTAGTCGACATCACCGGAGAGGCATTC
CAGGAAAATGAGGCTTGCCAGGTCGAAAAGGCCGCTCCAGAGCCAGAGCA
TGTGGTATTCGATCCGTCCAAGCATCTCGCTTTTGTGCCTCCTTCGCAGG
TCCACACGATGAACGAGCTCGGCTACCCTAACAATCGTGGAGTTTCCCCT
GTTGGCGTCTCCGAGCCATTCTCACTATTTTCGGTCGAAGCTGTGGAGCA
CATGCGTAAGGAAGTTCTCACCAGTGAGGTTTATGCCAAGCATAAGTACT
CGAGTGAGATTGCCGAATGTCAGCTAAGGGGCTATGCAGCTGAGTGCGCT
CCATTTGTTTATGACGCTTGGAAAAATCCTGAAACACTTGCGATAATCTC
CAAAGTCGCCGGTGTCGATCTCGTCCCGGTTATGGACTTCGAACTGGGCC
ATGTAAACATTTCTGGTCACAATGAAGAGGAGAAGCATGAAGCCGTGAAG
GAAGCCGGGGTATTGGGTAAGGGTATTGCCGTGAAGCCCAGCAACGATGA
TGCCATAGTCGACTGGCACACTGACAGCTACCCCTTCGTTTGTGTGACAA
TGCTATCCGACTGTACCAATATGATCGGTGGAGAAACGGCCCTTAGAACG
GGCAACGGCGATATTGTCAAAGTCAGGGGACCGCAGAAGGGTTCGGCAGT
CATCCTACAAGGCCGGTATATCGAGCACAAAGCTCTCCGTGCTTTGGGGG
CGACCGAGCGAATTACCATGGTGACTTCCTTCCGGCCTCGGGCTTCGTCC
ATCAAGGACGACACCGTGCTTACCACCGTCCGCCCAATATCGGACCTCAA
TGAATTGTATCATCAGTTCACTGAATATCGATTCGAAATCCTTGGCGATC
GTCTCCGTGACGTCAATAAACTTATGCGAGACCAGAAGCGAGCCCGGCGC
ACTTTTGATACGCGTGCTGCGAAACTCTTCATTCGTGAGCAGATCGATTT
TTTGGAACATATGAATAAAGAGATCGTGGACGACGAAAAAGTGATCAAGG
GAGTGATTGATGATAGTCACCTTGTGTCAGAGGATCTGAAGCTAGAGCGT
TCCCGGAAGCGGGCGCTCGCAGATGTCGAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4595CAN33_4595Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4595-T1.exon1CAN33_4595-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4595-T1.exon2CAN33_4595-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4595-T1.exon3CAN33_4595-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4595-T1.cdsCAN33_4595-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4595-T1CAN33_4595-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:539429..540695 +
Powered by Drupal