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CAN33_46050-T1, CAN33_46050-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46050-T1
Unique NameCAN33_46050-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2423807..2425557+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46050-T1 ID=CAN33_46050-T1|Name=CAN33_46050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1751bp|location=Sequence derived from alignment at NKJJ01000022.1:2423807..2425557+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCC
GCTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCA
TCTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGA
CAGGAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTGTG
TGCGCGCTCTTTCTCCAGCTGGGTGGTGTGATGTCTTGTAGTAGCTGTTG
AACTACTGCTACCTTTGTTTTTCTCTACTTTGCTGTTCCTCCCCGCCCCT
TTTGTTTCCTTTCTGTGTCGACTCAACTGGTTATGGAACCTTCCTCTCTT
GTTGCAAATAGACCAAGACACACGTCTATCATTGCAGGGATTGTTTGATT
GGTTCGTGAAACTGATTGCTTGGTTGGCGCCGCTTGCGCCCGCCCGGGGT
GCCTCCAGGTCGATGAAGACTTGCTACAACAACAGCAAGAAGCATATAGA
GTCCAGGGCGTCAATGAGGAGGAACAGATTACTGCGGCGCAGTTGAGGAA
GAAGCGCAAGCAACAGGCTACTACGGAAGAGGTTAGTCCAGCAGTTTACG
ATGATGCTTCCTTGACTTGGCCCCAATGGCACTGAGATGGGCCTAAAACT
AAGAAGATATGAAATCGCGTAGGGCAATGGGCAACAGAAGCCTAAGAAAC
AGCGCGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAA
TTCGACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGA
GATCGATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAA
ACTTCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAAT
CTCGCGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGG
ACCGCAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCC
AGCAAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATG
CGACGGACACAGAAGTTGAACAGGTATGGGGGAACTACATTTGACCTGGG
ATGATTGGGCTGGGCTTTGCTGATATACGCGTTTAGCAAACTTGCTGACT
GGGACGATGACGACCCGTCTGCCTTGCCGGATACGACTTCCCGTTTTGAT
AAGATCGTGATCTTGAAACATATGTTCACGTTGAAGGAATTAGATGTACG
GGAGTATCCATCCCGCGCTAGGAGTGATTGGTAAAAGGAACTAACGTTTG
GTGTAGGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTCGGGA
TGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGATAAGG
AACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGCCAGG
AGCTGTGTCAAGGTAAGCTTGATCATGGGATGACGATGGCCCAAACCCTC
CGGAAAGGAACATATGCTGATGATACTGTTACATTTAGATGATGGATGGG
CGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGA
GAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGG
AGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAG
TTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTG
A
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2423807..2425557+

>CAN33_46050-T1 ID=CAN33_46050-T1|Name=CAN33_46050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7182bp|location=Sequence derived from alignment at NKJJ01000022.1:2423807..2425557+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCC
GCTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCA
TCTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGA
CAGGAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGA
TGAAGACTTGCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCA
ATGAGGAGGAACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAA
CAGGCTACTACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCG
CGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCG
ACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATC
GATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTT
CAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCG
CGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCG
CAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCA
AGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGAC
GGACACAGAAGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCG
TCTGCCTTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAA
ACATATGTTCACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTG
ATATCAAGGAAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACC
AACGTTGTTCTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTT
TTCCGATCCCGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGT
TTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGA
TTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAA
AGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTG
GCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATG
GCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCT
AAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCT
CGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAG
GAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGA
AGACTTGCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATG
AGGAGGAACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAG
GCTACTACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGT
CAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACG
AAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGAT
AGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAA
AGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGA
TACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAG
GGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGA
GGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGA
CACAGAAGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCT
GCCTTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACA
TATGTTCACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATA
TCAAGGAAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAAC
GTTGTTCTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTC
CGATCCCGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTT
TCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTT
AAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGG
ATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCA
CGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCG
TCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAG
CAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGT
TCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAA
TACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGA
CTTGCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGG
AGGAACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCT
ACTACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAA
TACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAA
TCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGC
GGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGG
TGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATAC
AGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGA
CCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGC
GCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACAC
AGAAGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCC
TTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATAT
GTTCACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCA
AGGAAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTT
GTTCTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGA
TCCCGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCG
CTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAG
AAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATT
GGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGT
GGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCGTCG
CATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAA
CTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCT
CGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATAC
GAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGACTT
GCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGG
AACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACT
ACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAATAC
CGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAATCC
GCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGCGGC
CGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGGTGA
AGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATACAGA
TGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGACCC
ATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGCGCC
TACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACACAGA
AGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTG
CCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTT
CACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCAAGG
AAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTT
CTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCC
CGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCGCTG
GCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAGAAG
ACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATTGGA
TGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGTGGT
TGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCGTCGCAT
GCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAACTT
CCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCTCGA
AGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATACGAA
TATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGACTTGCT
ACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAAC
AGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACG
GAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAATACCGC
GGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAATCCGCG
ACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGCGGCCGA
CCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGGTGAAGC
TCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATACAGATGC
TGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGACCCATG
CGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGCGCCTAC
GAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACACAGAAGT
TGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCG
GATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCAC
GTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCAAGGAAG
ATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTC
TACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGA
GGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCGCTGGCA
CCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAGAAGACC
AATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATTGGATGC
GTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGTGGTTGG
AAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCGTCGCATGCT
CCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAACTTCCC
CCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCTCGAAGC
TAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATACGAATAT
GATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGACTTGCTACA
ACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGA
TTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAA
GAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAATACCGCGGT
CTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAATCCGCGACG
TCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGCGGCCGACCG
CGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGGTGAAGCTCT
CGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATACAGATGCTGG
ATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGACCCATGCGA
GTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGCGCCTACGAA
GACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACACAGAAGTTGA
ACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCGGAT
ACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCACGTT
GAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATA
TTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTAC
GATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGC
AGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCGCTGGCACCC
GAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAGAAGACCAAT
GAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATTGGATGCGTC
CGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGTGGTTGGAAA
GCTCACATACGGTCGAGAACACGGCCAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46050CAN33_46050Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46050-T1CAN33_46050-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46050-T1.exon1CAN33_46050-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46050-T1.exon2CAN33_46050-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46050-T1.exon3CAN33_46050-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46050-T1.exon4CAN33_46050-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_46050-T1.exon5CAN33_46050-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_46050-T1.exon6CAN33_46050-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46050-T1.cdsCAN33_46050-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034392
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2423807..2425557 +
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