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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2442641..2443457- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46075-T1 ID=CAN33_46075-T1|Name=CAN33_46075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=817bp|location=Sequence derived from alignment at NKJJ01000022.1:2442641..2443457- (Aspergillus niger FDAARGOS_311)
ATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAGTAAGGATGATT
TGTGTGTGGCCCAGATTTCCTCAGCTGCTGACAGTTCCGCAGCTCAGGTC
ACTCTGGGCGGTTCGGACATGAGTTTCTAGGTAGGTTCCCCGCGATGGTC
TACAGCTCGAGCTTCCCTATTAACAGAGCTTAAGAGTTCGACTTCCGTAC
CCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACT
ACCGCAATGATTCCCTGATCCGGAAAGAAAGTGAGTGCTAGGAAAGGGCC
GTCCGGTTCTACATCGATTCGCTAATGGGCGATCACTACAGTGTGCGTGA
GCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATC
ATGAAGTGAGTCAATCAGTGGGGTTCAATGGCGGTTGGTGGGGGTAAAAA
GATGCTGATGCGACGCAGGGAGGATGATTCCAAATGGCCTCAGAAGAACA
AGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCC
TTTGAGGTATGTCCATCGCCTCATTGACATAGATACTAACAGACGGGAAC
CTGACATCTGTTGTAGACTGCGAAAATCGGCTCATTGGTGGATGTGACTG
AATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGAC
CTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGTAAACAC
AGCTCCTTTGTCTCTTGCTACTCTATGAGTATCGAGTCTAATTCGGTAAT
AGATTAAACCCATCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2442641..2443457- >CAN33_46075-T1 ID=CAN33_46075-T1|Name=CAN33_46075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3255bp|location=Sequence derived from alignment at NKJJ01000022.1:2442641..2443457- (Aspergillus niger FDAARGOS_311)
ATTAAACCCATCTAAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGA
ATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACC
TGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGGAGGATGA
TTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTC
GGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGA
TTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGA
CTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACA
ACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACT
CTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATT
CTACCTCCGCTACTAATTAAACCCATCTAAACTGCGAAAATCGGCTCATT
GGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACT
ATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCAT
TTCAAGGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTC
AGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCG
TGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAG
ATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCG
TGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAA
GAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGAC
CCAAGGCGAACCATTCTACCTCCGCTACTAATTAAACCCATCTAAACTGC
GAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCC
TACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCG
CTTATTTCGCTCCATTTCAAGGGAGGATGATTCCAAATGGCCTCAGAAGA
ACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATC
TCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATC
ATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATG
GCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGAT
TCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAG
TTTCTAGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAATTAA
ACCCATCTAAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTG
CGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAG
GCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGGAGGATGATTCCA
AATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTC
GGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAG
GAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCC
GTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCC
AACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGG
CGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATTCTACC
TCCGCTACTAATTAAACCCATCTAAACTGCGAAAATCGGCTCATTGGTGG
ATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTC
GTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAA
GGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAA
CTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGC
GCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCAT
GAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGA
TATGCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAAC
TCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAG
GCGAACCATTCTACCTCCGCTACTAATTAAACCCATCTAAACTGCGAAAA
TCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGA
GTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTAT
TTCGCTCCATTTCAAGGGAGGATGATTCCAAATGGCCTCAGAAGAACAAG
GATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTT
TGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAA
GGAAAGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGT
AGCGCTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCT
GATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCT
AGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAATTAAACCCA
TCTAAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGAC
CCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCT
CATCTTCTCGCTTATTTCGCTCCATTTCAAGGGAGGATGATTCCAAATGG
CCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAA
CGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGT
GAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGTACC
CTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACTA
CCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTT
CGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATTCTACCTCCGC
TACTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0035145 | exon-exon junction complex |
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008380 | RNA splicing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017441 |
| DBxref | InterPro:IPR004023 |
| DBxref | InterPro:IPR036605 |
| DBxref | PFAM:PF02792 |
| Product | Mago nashi protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2442641..2443457 - |
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