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CAN33_46090-T1, CAN33_46090-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46090-T1
Unique NameCAN33_46090-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2449969..2451123-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46090-T1 ID=CAN33_46090-T1|Name=CAN33_46090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1155bp|location=Sequence derived from alignment at NKJJ01000022.1:2449969..2451123- (Aspergillus niger FDAARGOS_311)
ATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCGAGCGG
TACATACCTCACCCATCCGTCCAATTCGTACGTCCAGAAAACCAAATCTA
ACGAAGTAAAACTACAGAGAAGAAAATCCGCGACAAAGCCACCGACTCTC
TCTCACTCTTCCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTC
AAACTATGGAAGGGTCTATTCTTCTGTACGCTACATCTCTTCCCCAAATA
TCACACCGCCACAAACACCAACTAATCATGTATTTAACCAGGCTTCTACC
ACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCGCACTCTCAGCTAC
AGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATCGCTTCCTCCGCGC
CTTCTGGATAACCATTGGACGGGACTTCCACTCACTCGACCGTCTCCGTC
TAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGGCGTTGCATTTGAG
GTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCACCACATCCACAAA
CGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCATCAAAGCGGAATA
AGAAGAACAACAAGAACAAGAAACAAACCCAACAAGAAGAATCCACATCA
TCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGAATCCTACAT
CACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTGACCCGGATC
AACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCGCATGGACCG
GACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGAGTTGGAGAA
AGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGAAGAAGAAGG
TCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATTGAGAAGTTG
AAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGCGGAGACGCT
GGATGATGAGCGGTTGGTTGAGTGGGGGTTAAGGAGAGGAAGGTGGTGGA
GGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTGAGCTGTTGATATTT
GTCTGTATAAATTCTAATGGCTCTTGCATTTTTCTGTTTGATCAAAAGTG
TATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2449969..2451123-

>CAN33_46090-T1 ID=CAN33_46090-T1|Name=CAN33_46090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3525bp|location=Sequence derived from alignment at NKJJ01000022.1:2449969..2451123- (Aspergillus niger FDAARGOS_311)
TGTATAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGAATCCTA
CATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTGACCCGG
ATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCGCATGGA
CCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGAGTTGGA
GAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGAAGAAGA
AGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATTGAGAAG
TTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGCGGAGAC
GCTGGATGATGAGCGGCTTCTACCACTCCGACCGTCCCCTAACGCAACAA
GCACTCGCCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAG
CACGCTGCATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACT
TCCACTCACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCAG
AAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCGCTC
CAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTCTAT
TCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTC
GAGCGTGTATAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGAA
TCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTGA
CCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCGC
ATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGAG
TTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGAA
GAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATTG
AGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGCG
GAGACGCTGGATGATGAGCGGCTTCTACCACTCCGACCGTCCCCTAACGC
AACAAGCACTCGCCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCC
CGAAGCACGCTGCATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACG
GGACTTCCACTCACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGA
TCCAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTC
CGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGG
TCTATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTC
GCCTCGAGCGTGTATAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCC
TCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAAC
TTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCAT
GCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTG
ATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAA
CCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCC
GATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGG
CTGCGGAGACGCTGGATGATGAGCGGCTTCTACCACTCCGACCGTCCCCT
AACGCAACAAGCACTCGCCCGCACTCTCAGCTACAGCCTGGTCCCGACGC
TCCCCCGAAGCACGCTGCATCGCTTCCTCCGCGCCTTCTGGATAACCATT
GGACGGGACTTCCACTCACTCGACCGTCTCCGTCTAGACAAGTACCTATT
CCTGATCCAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCT
TCCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGG
AAGGGTCTATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGG
ATCTCGCCTCGAGCGTGTATAGCAACCACCGCAGAAGAAAAAGACTGGTC
CGCCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTC
TGAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTG
CCCATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTG
GATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGG
GGCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTG
AGGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGAC
TCGGGCTGCGGAGACGCTGGATGATGAGCGGCTTCTACCACTCCGACCGT
CCCCTAACGCAACAAGCACTCGCCCGCACTCTCAGCTACAGCCTGGTCCC
GACGCTCCCCCGAAGCACGCTGCATCGCTTCCTCCGCGCCTTCTGGATAA
CCATTGGACGGGACTTCCACTCACTCGACCGTCTCCGTCTAGACAAGTAC
CTATTCCTGATCCAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTC
ACTCTTCCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAAC
TATGGAAGGGTCTATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGT
ACGGGATCTCGCCTCGAGCGTGTATAGCAACCACCGCAGAAGAAAAAGAC
TGGTCCGCCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTG
CCCTCTGAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATT
ACGTGCCCATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGAT
ATCTGGATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGA
AGAGGGGCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTT
TGTTGAGGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTG
CGGACTCGGGCTGCGGAGACGCTGGATGATGAGCGGCTTCTACCACTCCG
ACCGTCCCCTAACGCAACAAGCACTCGCCCGCACTCTCAGCTACAGCCTG
GTCCCGACGCTCCCCCGAAGCACGCTGCATCGCTTCCTCCGCGCCTTCTG
GATAACCATTGGACGGGACTTCCACTCACTCGACCGTCTCCGTCTAGACA
AGTACCTATTCCTGATCCAGAAGAAAATCCGCGACAAAGCCACCGACTCT
CTCTCACTCTTCCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCT
CAAACTATGGAAGGGTCTATTCTTCTATGTCCGACGTGACCAAGACTCCC
TTCGTACGGGATCTCGCCTCGAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030688preribosome, small subunit precursor
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46090CAN33_46090Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46090-T1CAN33_46090-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46090-T1.cdsCAN33_46090-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46090-T1.exon5CAN33_46090-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_46090-T1.exon4CAN33_46090-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_46090-T1.exon3CAN33_46090-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46090-T1.exon2CAN33_46090-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46090-T1.exon1CAN33_46090-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092646C6
DBxrefInterPro:IPR010301
DBxrefPFAM:PF05997
ProductNucleolar proteinNop52 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2449969..2451123 -
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