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CAN33_4610-T1, CAN33_4610-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4610-T1
Unique NameCAN33_4610-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:547879..548627+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4610-T1 ID=CAN33_4610-T1|Name=CAN33_4610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=749bp|location=Sequence derived from alignment at NKJJ01000019.1:547879..548627+ (Aspergillus niger FDAARGOS_311)
ATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCT
GAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGGTT
CGTTGCAGCTTCCCCAGTGATCGGAGACGCGGAACCGCCATAAACTAGAT
AGCTAACCCGGAGCTCAATTAGTACAATTCGCGGAGTACATCCAAGCCAA
CATCCAACTATACACGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGG
TTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAAT
CCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAA
GCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTCCCGTACCAT
ATGCTGCTCACGGCTATGCGCAGTAAGTGTGGGCGCTGAGTAACAGCGGT
CTCAAGCTGTTGGGATTCATGCTAAGGTGCTCTAGATACTACTGCCTGTC
CACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGA
AGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGAT
TACAAGGGGGTATGTTACCAGAGTCATAGGCCCCGCAGTGCGAGCGAGTA
TGGGTAGCTGACAGCTTCTAGGTTCTGGTGAAGATCGTGACAAAGGACGG
CGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:547879..548627+

>CAN33_4610-T1 ID=CAN33_4610-T1|Name=CAN33_4610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2196bp|location=Sequence derived from alignment at NKJJ01000019.1:547879..548627+ (Aspergillus niger FDAARGOS_311)
ATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCT
GAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTAC
AATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAAC
GATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAAT
GGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGG
GAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTAT
CTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATA
CTACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCG
AAGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGA
CTACCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGG
CGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAA
TGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTG
AATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACA
ATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACG
ATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATG
GCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGG
AGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATC
TGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATAC
TACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGA
AGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGAC
TACCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGGC
GTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAAT
GAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTGA
ATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACAA
TTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACGA
TACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGG
CGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGA
GGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATCT
GGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATACT
ACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAA
GAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACT
ACCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGGCG
TGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAATG
AGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTGAA
TGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACAAT
TCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACGAT
ACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGGC
GCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGAG
GTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATCTG
GCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATACTA
CTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAG
AAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTA
CCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGGCGT
GCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCB4CAN33_4610Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4610-T1.exon1CAN33_4610-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4610-T1.exon2CAN33_4610-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4610-T1.exon3CAN33_4610-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4610-T1.exon4CAN33_4610-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4610-T1.cdsCAN33_4610-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4610-T1CAN33_4610-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteMEROPS:MER0002676
DBxrefInterPro:IPR035206
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefPFAM:PF00227
ProductProbable proteasome subunit beta type-4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:547879..548627 +
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