You are here

Home

CAN33_46125-T1, CAN33_46125-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46125-T1
Unique NameCAN33_46125-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2484240..2485628-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46125-T1 ID=CAN33_46125-T1|Name=CAN33_46125-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1389bp|location=Sequence derived from alignment at NKJJ01000022.1:2484240..2485628- (Aspergillus niger FDAARGOS_311)
ATGTCTATAGCTCCGATTATTACCTTCAAAGCGGGTATCTGTGACCTCGA
GGTTAGTTGGATATGAAGCTTTCCCCCACCCGCCACTATCAACACGTTAC
TCACCACATTTGTTTGTTTTTTGATAGACGTCCGGTGAAACCTCCGTCGT
CAAGCCCAAGCCCACCCCCGGTTACATCTACCTCTACTCCGAAGATGAGC
TGGTACACTTTTGCTGGCGCCCCAGATCTGCTCCCCACACGGAACCCGAG
CTCGACCTGGTAATGGTTCCCTCCGATGGATGCTTTGTGCCTTACAAGCC
TGTCGACTCTACAGCACCTACCAATGGCCGTATCTACGTCTTAAAGTTCT
CCTCCAGCTCCCAACGGTACCTCTTCTGGCTGCAGTCCAAGACTCAGCAC
GAGGACGGAAACCCGAGCTGGTTCAGCCAAAGAGATCTTAAGCTAGGAGA
GATTGTCAACGGACTACTTCAGGGTGAAGATGTTGATGTAGAACATGAGA
TCGCCAACCTTCCTCGAGGTGGTCCTTCGGGCGGCGATGACGACGAGACT
ATGGAAGATGTTGAAGGCGTGGACCATGACCCGAACCACAACCACGGAGG
AAACAGCGGAGGAGCAGGCCCGGATGCGACTGGCGGTGATGTTCGGGCGG
AAGGCCAAGGATCGAGGGAGGGTGGTGCCGATGGTGGAAGAGCGTAGGTA
CATATCTCGACAGTTTTATTTGTCTCTAGTCTTGAACTTTACTAGCCGGG
ATATTCAATATGCTCGGATATTTTGGTCACGATTATAGGCGTTCCTTTCC
ATGAATTCAAGCTAACCAGCATCATTTGGCTCACAGGGCCGCCGCTGACT
CGGATCCTTCATCTGTCGTGCAGAGCTTCCTGCAGTCGTTGCATGGGGGC
TCACGGCAATCCCAAGACCCCGAGAAACCTTTCACTACTCTGCAAGATCT
ACTTACAACCTCGACTACATTGCCTTTCCTGGAATCTGCGGACGAAAAAG
CGGTTGACAATCTCCTGAGCTTCCTGCCACCATCGCTGCTTCTCCTGGCA
CAGGACAATGATCTCGACGAAGCCGCGGCAGCTGATCAGGACCCGGACAT
TGCTCAAGCCGCCCTGGGATCCCTCGAACTGACGCAAAAGAAAGAGATTC
TGCGCAAAGTTCTACACTCACCTCAATTTGCGCAGAGTCTAGCAAGCTTG
ACGATGGCCATTAGGGATGGTGGATTACCGAGCATCAGCGAGGCCCTAAA
AATTCCGGTTGCAAATGGAGGATTCATGCGTAGAGGGGGAGTTCCATTGG
GTGGTGGTGATGCTGTTGAAGCATTCCTTCAAGGCGTTCGGGATCATGTT
AAGGATTCGGCTCAAGGAAACCGTATGGACACCGATTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2484240..2485628-

>CAN33_46125-T1 ID=CAN33_46125-T1|Name=CAN33_46125-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3510bp|location=Sequence derived from alignment at NKJJ01000022.1:2484240..2485628- (Aspergillus niger FDAARGOS_311)
GGCCGCCGCTGACTCGGATCCTTCATCTGTCGTGCAGAGCTTCCTGCAGT
CGTTGCATGGGGGCTCACGGCAATCCCAAGACCCCGAGAAACCTTTCACT
ACTCTGCAAGATCTACTTACAACCTCGACTACATTGCCTTTCCTGGAATC
TGCGGACGAAAAAGCGGTTGACAATCTCCTGAGCTTCCTGCCACCATCGC
TGCTTCTCCTGGCACAGGACAATGATCTCGACGAAGCCGCGGCAGCTGAT
CAGGACCCGGACATTGCTCAAGCCGCCCTGGGATCCCTCGAACTGACGCA
AAAGAAAGAGATTCTGCGCAAAGTTCTACACTCACCTCAATTTGCGCAGA
GTCTAGCAAGCTTGACGATGGCCATTAGGGATGGTGGATTACCGAGCATC
AGCGAGGCCCTAAAAATTCCGGTTGCAAATGGAGGATTCATGCGTAGAGG
GGGAGTTCCATTGGGTGGTGGTGATGCTGTTGAAGCATTCCTTCAAGGCG
TTCGGGATCATGTTAAGGATTCGGCTCAAGGAAACCGTATGGACACCGAT
TGAACGTCCGGTGAAACCTCCGTCGTCAAGCCCAAGCCCACCCCCGGTTA
CATCTACCTCTACTCCGAAGATGAGCTGGTACACTTTTGCTGGCGCCCCA
GATCTGCTCCCCACACGGAACCCGAGCTCGACCTGGTAATGGTTCCCTCC
GATGGATGCTTTGTGCCTTACAAGCCTGTCGACTCTACAGCACCTACCAA
TGGCCGTATCTACGTCTTAAAGTTCTCCTCCAGCTCCCAACGGTACCTCT
TCTGGCTGCAGTCCAAGACTCAGCACGAGGACGGAAACCCGAGCTGGTTC
AGCCAAAGAGATCTTAAGCTAGGAGAGATTGTCAACGGACTACTTCAGGG
TGAAGATGTTGATGTAGAACATGAGATCGCCAACCTTCCTCGAGGTGGTC
CTTCGGGCGGCGATGACGACGAGACTATGGAAGATGTTGAAGGCGTGGAC
CATGACCCGAACCACAACCACGGAGGAAACAGCGGAGGAGCAGGCCCGGA
TGCGACTGGCGGTGATGTTCGGGCGGAAGGCCAAGGATCGAGGGAGGGTG
GTGCCGATGGTGGAAGAGCATGTCTATAGCTCCGATTATTACCTTCAAAG
CGGGTATCTGTGACCTCGAGGGCCGCCGCTGACTCGGATCCTTCATCTGT
CGTGCAGAGCTTCCTGCAGTCGTTGCATGGGGGCTCACGGCAATCCCAAG
ACCCCGAGAAACCTTTCACTACTCTGCAAGATCTACTTACAACCTCGACT
ACATTGCCTTTCCTGGAATCTGCGGACGAAAAAGCGGTTGACAATCTCCT
GAGCTTCCTGCCACCATCGCTGCTTCTCCTGGCACAGGACAATGATCTCG
ACGAAGCCGCGGCAGCTGATCAGGACCCGGACATTGCTCAAGCCGCCCTG
GGATCCCTCGAACTGACGCAAAAGAAAGAGATTCTGCGCAAAGTTCTACA
CTCACCTCAATTTGCGCAGAGTCTAGCAAGCTTGACGATGGCCATTAGGG
ATGGTGGATTACCGAGCATCAGCGAGGCCCTAAAAATTCCGGTTGCAAAT
GGAGGATTCATGCGTAGAGGGGGAGTTCCATTGGGTGGTGGTGATGCTGT
TGAAGCATTCCTTCAAGGCGTTCGGGATCATGTTAAGGATTCGGCTCAAG
GAAACCGTATGGACACCGATTGAACGTCCGGTGAAACCTCCGTCGTCAAG
CCCAAGCCCACCCCCGGTTACATCTACCTCTACTCCGAAGATGAGCTGGT
ACACTTTTGCTGGCGCCCCAGATCTGCTCCCCACACGGAACCCGAGCTCG
ACCTGGTAATGGTTCCCTCCGATGGATGCTTTGTGCCTTACAAGCCTGTC
GACTCTACAGCACCTACCAATGGCCGTATCTACGTCTTAAAGTTCTCCTC
CAGCTCCCAACGGTACCTCTTCTGGCTGCAGTCCAAGACTCAGCACGAGG
ACGGAAACCCGAGCTGGTTCAGCCAAAGAGATCTTAAGCTAGGAGAGATT
GTCAACGGACTACTTCAGGGTGAAGATGTTGATGTAGAACATGAGATCGC
CAACCTTCCTCGAGGTGGTCCTTCGGGCGGCGATGACGACGAGACTATGG
AAGATGTTGAAGGCGTGGACCATGACCCGAACCACAACCACGGAGGAAAC
AGCGGAGGAGCAGGCCCGGATGCGACTGGCGGTGATGTTCGGGCGGAAGG
CCAAGGATCGAGGGAGGGTGGTGCCGATGGTGGAAGAGCATGTCTATAGC
TCCGATTATTACCTTCAAAGCGGGTATCTGTGACCTCGAGGGCCGCCGCT
GACTCGGATCCTTCATCTGTCGTGCAGAGCTTCCTGCAGTCGTTGCATGG
GGGCTCACGGCAATCCCAAGACCCCGAGAAACCTTTCACTACTCTGCAAG
ATCTACTTACAACCTCGACTACATTGCCTTTCCTGGAATCTGCGGACGAA
AAAGCGGTTGACAATCTCCTGAGCTTCCTGCCACCATCGCTGCTTCTCCT
GGCACAGGACAATGATCTCGACGAAGCCGCGGCAGCTGATCAGGACCCGG
ACATTGCTCAAGCCGCCCTGGGATCCCTCGAACTGACGCAAAAGAAAGAG
ATTCTGCGCAAAGTTCTACACTCACCTCAATTTGCGCAGAGTCTAGCAAG
CTTGACGATGGCCATTAGGGATGGTGGATTACCGAGCATCAGCGAGGCCC
TAAAAATTCCGGTTGCAAATGGAGGATTCATGCGTAGAGGGGGAGTTCCA
TTGGGTGGTGGTGATGCTGTTGAAGCATTCCTTCAAGGCGTTCGGGATCA
TGTTAAGGATTCGGCTCAAGGAAACCGTATGGACACCGATTGAACGTCCG
GTGAAACCTCCGTCGTCAAGCCCAAGCCCACCCCCGGTTACATCTACCTC
TACTCCGAAGATGAGCTGGTACACTTTTGCTGGCGCCCCAGATCTGCTCC
CCACACGGAACCCGAGCTCGACCTGGTAATGGTTCCCTCCGATGGATGCT
TTGTGCCTTACAAGCCTGTCGACTCTACAGCACCTACCAATGGCCGTATC
TACGTCTTAAAGTTCTCCTCCAGCTCCCAACGGTACCTCTTCTGGCTGCA
GTCCAAGACTCAGCACGAGGACGGAAACCCGAGCTGGTTCAGCCAAAGAG
ATCTTAAGCTAGGAGAGATTGTCAACGGACTACTTCAGGGTGAAGATGTT
GATGTAGAACATGAGATCGCCAACCTTCCTCGAGGTGGTCCTTCGGGCGG
CGATGACGACGAGACTATGGAAGATGTTGAAGGCGTGGACCATGACCCGA
ACCACAACCACGGAGGAAACAGCGGAGGAGCAGGCCCGGATGCGACTGGC
GGTGATGTTCGGGCGGAAGGCCAAGGATCGAGGGAGGGTGGTGCCGATGG
TGGAAGAGCATGTCTATAGCTCCGATTATTACCTTCAAAGCGGGTATCTG
TGACCTCGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46125CAN33_46125Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46125-T1CAN33_46125-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46125-T1.cdsCAN33_46125-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46125-T1.exon3CAN33_46125-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46125-T1.exon2CAN33_46125-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46125-T1.exon1CAN33_46125-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR032368
DBxrefInterPro:IPR006773
DBxrefInterPro:IPR038108
DBxrefInterPro:IPR038633
DBxrefPFAM:PF16550
DBxrefPFAM:PF04683
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2484240..2485628 -
Powered by Drupal