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CAN33_46130-T1, CAN33_46130-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46130-T1
Unique NameCAN33_46130-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2486144..2487141+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46130-T1 ID=CAN33_46130-T1|Name=CAN33_46130-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=998bp|location=Sequence derived from alignment at NKJJ01000022.1:2486144..2487141+ (Aspergillus niger FDAARGOS_311)
ATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAAGGGCCAGAG
GACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACCCCGTTGATG
ACGAGTCGCAGCCCAAGAAAGTCAGTACCACACCCCGTGCAAGAGCCAGA
AAATGAGGTGGAAACGGATGCGGTTTCGTTATGAACAAATGCGACGGGTT
TGCGCTGGTCATTGGGAAAGATTGAACCTCCTGTATAAAAAAGCTGGAGG
TTTGGGGGAAATTCAAAGATTCAGGGCCAGTGCTCTATACCGCATGAGTT
GATAAGGAAATCGCATCTTGGAGAAATTGGGGCCCCGGAATTCGAAATGG
ACAAGAAGGAATTGGAACAGGCATTCTGACATGGTTATTTTATATACATA
TAGGTCCGCAAGGCTATCCGTCCCGCTAAGGTCCGCGAGAGCCTCCAGCC
CGGTACCGTTCTGATCCTCCTCGCCGGCCGCTTCCGTGGAAAGCGTGTCG
TTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCCTCGTCACCGGTCCCTTC
AAGATCAACGGTGTTCCCCTCCGCCGTGTCAACGCTCGTTACGTGATCGC
CACCAGCACCCGTATCGACATCAGCGGTGTTGACGCCCAGACCATCGAGA
AGGTCTCCGCTGCCGACTACTTCACCAAGGAGAAGAAGGCTGAGAAGAAG
ACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAGCCCCAGGTATGTGCACA
TACACACCCGTGGTTGGGCTCTTCCTTCGAGAAGAGTCCGACTTTTGCGG
AAGTGGCCGGATGATACTGATGTAGCGTTTTTTCTCCATCAACAGAAGAA
GGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGCCGTTGACCAGTCCA
TCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAAGCTACCTGGCCAGC
ACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAGATGAAGTGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2486144..2487141+

>CAN33_46130-T1 ID=CAN33_46130-T1|Name=CAN33_46130-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1827bp|location=Sequence derived from alignment at NKJJ01000022.1:2486144..2487141+ (Aspergillus niger FDAARGOS_311)
ATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAAGGGCCAGAG
GACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACCCCGTTGATG
ACGAGTCGCAGCCCAAGAAAGTCCGCAAGGCTATCCGTCCCGCTAAGGTC
CGCGAGAGCCTCCAGCCCGGTACCGTTCTGATCCTCCTCGCCGGCCGCTT
CCGTGGAAAGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCC
TCGTCACCGGTCCCTTCAAGATCAACGGTGTTCCCCTCCGCCGTGTCAAC
GCTCGTTACGTGATCGCCACCAGCACCCGTATCGACATCAGCGGTGTTGA
CGCCCAGACCATCGAGAAGGTCTCCGCTGCCGACTACTTCACCAAGGAGA
AGAAGGCTGAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAG
CCCCAGAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGCCGT
TGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAAGCT
ACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAGATG
AAGTGGTAGATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAA
GGGCCAGAGGACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACC
CCGTTGATGACGAGTCGCAGCCCAAGAAAGTCCGCAAGGCTATCCGTCCC
GCTAAGGTCCGCGAGAGCCTCCAGCCCGGTACCGTTCTGATCCTCCTCGC
CGGCCGCTTCCGTGGAAAGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGG
GTGTTCTCCTCGTCACCGGTCCCTTCAAGATCAACGGTGTTCCCCTCCGC
CGTGTCAACGCTCGTTACGTGATCGCCACCAGCACCCGTATCGACATCAG
CGGTGTTGACGCCCAGACCATCGAGAAGGTCTCCGCTGCCGACTACTTCA
CCAAGGAGAAGAAGGCTGAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAG
GGAGAGAAGCCCCAGAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCA
GAAGGCCGTTGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCC
TCGGAAGCTACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCC
CACGAGATGAAGTGGTAGATGTCGGACTCTACTGTTGGCCAGACGAAGCA
GTTTGGAAAGGGCCAGAGGACCGTCCCTCACCCGGCCCAGAAGGCCCAGA
AATGGTACCCCGTTGATGACGAGTCGCAGCCCAAGAAAGTCCGCAAGGCT
ATCCGTCCCGCTAAGGTCCGCGAGAGCCTCCAGCCCGGTACCGTTCTGAT
CCTCCTCGCCGGCCGCTTCCGTGGAAAGCGTGTCGTTCTCCTCAAGCACC
TCGAGCAGGGTGTTCTCCTCGTCACCGGTCCCTTCAAGATCAACGGTGTT
CCCCTCCGCCGTGTCAACGCTCGTTACGTGATCGCCACCAGCACCCGTAT
CGACATCAGCGGTGTTGACGCCCAGACCATCGAGAAGGTCTCCGCTGCCG
ACTACTTCACCAAGGAGAAGAAGGCTGAGAAGAAGACCGAGGAGGCTTTC
TTCAAGCAGGGAGAGAAGCCCCAGAAGAAGGTTGTTGCCAGCGCCCGCGC
TAGCGACCAGAAGGCCGTTGACCAGTCCATCCTCGCCTCCGTCAAGAAGG
AGGCTTTCCTCGGAAGCTACCTGGCCAGCACCTTCAGCCTCCGCAACGGC
GACAAGCCCCACGAGATGAAGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46130CAN33_46130Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46130-T1.exon1CAN33_46130-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46130-T1.exon2CAN33_46130-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46130-T1.exon3CAN33_46130-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46130-T1.cdsCAN33_46130-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46130-T1CAN33_46130-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041997
DBxrefInterPro:IPR000915
DBxrefInterPro:IPR014722
DBxrefPFAM:PF01159
ProductRibosomal protein L6e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2486144..2487141 +
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