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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2489840..2490965- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46140-T1 ID=CAN33_46140-T1|Name=CAN33_46140-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1126bp|location=Sequence derived from alignment at NKJJ01000022.1:2489840..2490965- (Aspergillus niger FDAARGOS_311)
ATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGGTATGTTT
CCATCGTCGCCTCCCATGTGTTGCCCTTAGCATGGTTGGCTAACCTCTTC
TTTAGACCGTCGTTATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTG
GCTTGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCAC
GGAGTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGTAAGTAGAGCCT
CGGTTTTTTTGGAAGAATCTCAGCTAACTCTCAATTCTCTTGAAGGGTAC
GGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGATCTGA
CCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGAAC
CACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCC
CGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGATA
CGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGTGG
CTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCT
TATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGCTC
CTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCAGC
CAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGA
GGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGGCATTC
TCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTAAG
AAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACAT
TGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGATGTTCG
TTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATTCA
TTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCA
TGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACG
GCGTCCCATCTCGCCCGAGAGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2489840..2490965- >CAN33_46140-T1 ID=CAN33_46140-T1|Name=CAN33_46140-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3015bp|location=Sequence derived from alignment at NKJJ01000022.1:2489840..2490965- (Aspergillus niger FDAARGOS_311)
GGTACGGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGA
TCTGACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAAT
GGAACCACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGC
AGCCCCGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAAT
GGATACGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGAC
GGTGGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGA
CACCTTATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTA
TGCTCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTC
TCAGCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGC
TCGGAGGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGG
CATTCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTA
CTAAGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCA
AACATTGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGAT
GTTCGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGA
ATTCATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTC
CTGCATGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAA
GCACGGCGTCCCATCTCGCCCGAGAGAGTAAACCGTCGTTATCACGGGCG
GTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGT
GCAAATGTTGTGCTTGTCGCACGCACGGAGTCGAAGCTCCAGGATGCCCT
CGAGGCTGTCAAGATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGG
GCAGGGGTACGGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGT
GCGGATCTGACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCAC
CGAATGGAACCACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGAT
ACTGCAGCCCCGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGAC
CAAATGGATACGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCT
GAGACGGTGGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTC
CCAGACACCTTATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCT
GGTTATGCTCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGA
TACTCTCAGCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGT
GCCGCTCGGAGGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCC
ATGGGCATTCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGA
GCTTACTAAGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGG
TTGCAAACATTGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACC
ACGATGTTCGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCA
ACGGAATTCATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGT
TGTTCCTGCATGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGT
GAGAAGCACGGCGTCCCATCTCGCCCGAGAGAGTAAACCGTCGTTATCAC
GGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGA
AGGGTGCAAATGTTGTGCTTGTCGCACGCACGGAGTCGAAGCTCCAGGAT
GCCCTCGAGGCTGTCAAGATGTTCGGCTTTGGTCGTAATCAGTTCGTCGT
TCAGGGCAGGGGTACGGCGGCTGAAGCCGACCGGCAGAGATTCCACTACA
TCTGTGCGGATCTGACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAA
GTCACCGAATGGAACCACGGACAATCTCCCGATATCGTATGGTGCTGCGC
AGGATACTGCAGCCCCGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGA
GGGACCAAATGGATACGGTGTACTGGACAGCTGCCAACACTGCTCATGCC
ATCCTGAGACGGTGGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACT
ACCTCCCAGACACCTTATCTTCACATGCTCTACCCTCGCATTTGTGCCCA
TTGCTGGTTATGCTCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTG
TCTGATACTCTCAGCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGA
CAAGTGCCGCTCGGAGGCTCCAGCCACGGACGTGAAGATCCATACAGTCT
TCCCCATGGGCATTCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAG
CCGGAGCTTACTAAGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAG
GGAGGTTGCAAACATTGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGA
TCACCACGATGTTCGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGC
AGCCAACGGAATTCATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAA
CTTGTTGTTCCTGCATGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCT
GGGGTGAGAAGCACGGCGTCCCATCTCGCCCGAGAGAGTAAACCGTCGTT
ATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGC
AGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCACGGAGTCGAAGCTCC
AGGATGCCCTCGAGGCTGTCAAGATGTTCGGCTTTGGTCGTAATCAGTTC
GTCGTTCAGGGCAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | 3-dehydrosphinganine reductase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2489840..2490965 - |
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