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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:549005..550908+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4615-T1 ID=CAN33_4615-T1|Name=CAN33_4615-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1904bp|location=Sequence derived from alignment at NKJJ01000019.1:549005..550908+ (Aspergillus niger FDAARGOS_311)
ATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAGG
CTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAGG
ACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCAA
CTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATCA
GGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCGAATCGTC
CGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACGTC
AGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCAAT
CGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTGTC
GAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGGCA
GAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACCAT
GTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGCTA
TGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCCGT
ACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACGCA
TTCGACCTGGCAGGAAACCGTTATAGGCCTGGTAAGACACTCAGACTGTT
TATATTGCTAAAGACAATGTGCTAATCATTTGCAGGTTTTGTTGGCATGA
ATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCT
CACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACC
AGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTAT
GGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAG
GAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGA
TCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTCG
GAGGCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAGCCGCA
TTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGA
TACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCC
AAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTC
TTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTAC
CCTCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCACA
GAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCAC
ATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAAT
CGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGC
CAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTGTC
GCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGA
AGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAG
GAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGAT
AAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGA
GCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAG
CAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAA
CGTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTAA
GTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:549005..550908+ >CAN33_4615-T1 ID=CAN33_4615-T1|Name=CAN33_4615-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5409bp|location=Sequence derived from alignment at NKJJ01000019.1:549005..550908+ (Aspergillus niger FDAARGOS_311)
ATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAGG
CTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAGG
ACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCAA
CTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATCA
GGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCGAATCGTC
CGATATTGATGCTGATGACGACAAACCGCGACCTGTACCTCGATACGATC
AATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTT
GTCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGG
GCAGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACAC
CATGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGG
CTATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACC
CGTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGAC
GCATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCATGAA
TAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCTC
ACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACCA
GGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTATG
GAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAGG
AGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGAT
CCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTCGG
AGGCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAGCCGCAT
TCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGAT
ACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCCA
AACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTCT
TCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTACC
CTCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCACAG
AGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCACA
TCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAATC
GTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGCC
AAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTGTCG
CAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGAA
GCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAGG
AGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGATA
AAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGAG
CAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAGC
AGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAAC
GTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTAAG
TGAATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGC
AGGCTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGG
AGGACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAG
CAACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGA
TCAGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCGAATC
GTCCGATATTGATGCTGATGACGACAAACCGCGACCTGTACCTCGATACG
ATCAATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAG
CTTGTCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCC
AGGGCAGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGA
CACCATGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGA
AGGCTATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGG
ACCCGTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACAC
GACGCATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCAT
GAATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAG
CTCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAA
CCAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACT
ATGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGC
AGGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCC
GATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCT
CGGAGGCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAGCCG
CATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCA
GATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAG
CCAAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCC
TCTTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACT
ACCCTCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCA
CAGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCC
ACATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACA
ATCGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGA
GCCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTG
TCGCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAG
GAAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTC
AGGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATG
ATAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGC
GAGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCG
AGCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGG
AACGTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCT
AAGTGAATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGC
AGCAGGCTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGC
CGGAGGACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGA
CAGCAACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGC
TGATCAGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCGA
ATCGTCCGATATTGATGCTGATGACGACAAACCGCGACCTGTACCTCGAT
ACGATCAATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGT
CAGCTTGTCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACT
TCCAGGGCAGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTC
GGACACCATGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCC
GGAAGGCTATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGG
TGGACCCGTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTA
CACGACGCATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGG
CATGAATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCT
TAGCTCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCT
CAACCAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAA
ACTATGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGT
TGCAGGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAG
TCCGATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTC
TCTCGGAGGCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAG
CCGCATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCAT
TCAGATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAA
CAGCCAAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGC
CCCTCTTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTG
ACTACCCTCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGC
CCACAGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCT
TCCACATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCC
ACAATCGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGT
TGAGCCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATC
TTGTCGCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCAC
GAGGAAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTC
GTCAGGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGC
ATGATAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCT
GGCGAGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAA
GCGAGCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTAT
GGGAACGTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCG
GCTAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000245 | spliceosomal complex assembly |
| GO:0006397 | mRNA processing |
| GO:0016579 | protein deubiquitination |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262QL6 |
| Note | MEROPS:MER0064621 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR033809 |
| DBxref | InterPro:IPR028889 |
| DBxref | InterPro:IPR001394 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001607 |
| DBxref | PFAM:PF02148 |
| DBxref | PFAM:PF00443 |
| Product | Ubiquitin carboxyl-terminal hydrolase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:549005..550908 + |
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