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CAN33_46160-T1, CAN33_46160-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46160-T1
Unique NameCAN33_46160-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2497800..2500196-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46160-T1 ID=CAN33_46160-T1|Name=CAN33_46160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2397bp|location=Sequence derived from alignment at NKJJ01000022.1:2497800..2500196- (Aspergillus niger FDAARGOS_311)
ATGTCGTCAAGGTTACAACTCGCTCGGGGTCGGCTTCTCCGGCCATCCTC
CCTACCGTCATCGAACCGCGTTCTTCAACCTTCTCAAGCATTGCGTCTAC
TTGCGCGCACCCGGATCGCGAATCTCGCCCGGCACCCGTCCGTCTTGCCT
ATACGCACTTATGCCAATGGCCGCCCTCATCCTCCCGGAGGCACACATCG
CATGAACCTTGGTGGTGAACCAGAAAAGTCAGCCTTGGAACAGTTCGGTG
TCGACCTTACAGCCAGGGCTAAGGCAGGCAAGCTGGACCCGGTCATTGGA
CGTGATGCCGAAATCCATCGCACCATTCAGGTTCTCTCCAGACGAACGAA
AAACAACCCCGTTCTGATTGGAGCTGCGGGTACCGGAAAAACTGCGGTCT
TGGAGGGTTTGGCACAGAGGATTGTTCAGGGAGACGTTCCAGAGAGCATC
AAGGACAAACGTGTTATTGCGCTGGATCTGGGTTCTCTCATTGCTGGTGC
TAAGTTCAGAGGTGATTTTGAAGAGCGGTTGAAATCTGTTCTTAAGGAGG
TCGAGGATGCGCAAGGGGGTGTAATCCTCTTCATTGATGAGCTTCATACC
TTACTTGGCTTGGGAAAGGCGGAAGGCAGTATCGACGCCAGCAACCTTCT
GAAACCGGCTTTGTCTCGCGGTGAGCTGCAATGTTGCGGTGCCACGACTT
TGAACGAGTACAGGTTGATTGAGAAGGACGTGGCTTTGGCTAGACGCTTC
CAGCCTATCCAAGTCGGGGAGCCCTCGGTTGCTGCTACTATATCCATCTT
GCGTGGTATCAAGAACAAGTATGAAGTGCACCATGGTGTCCGAATCACGG
ATGGTGCTTTGGTGGCGGCGGCAACTTACAGCAACCGGTACATCACGGAT
CGGTTCCTTCCCGATAAGGCGATTGATCTGGTAGACGAGGCGGCGTCCGC
CTTGCGACTACAGCAAGAATCGAAGCCCGATGTGATCAGAGAGCTCGACC
GCGATATTACCACCATCCAAATTGAGCTCGAGTCGCTTCGCAAGGAGACT
GACGTCAGTAGCCGCGAAAGAAGAGATAAACTTCAGGAAGACCTGAAAGT
CAAACAAGAAGAAGCGAGGAAATTGACTGAGGTATGGGAGAAGGAGAAAG
CAGAAATCGAAGAACTCAAGCGTGCCAAAGAGGAGCTGGAGCGTGCTCGT
TTCGAATTGGAGAAAGCTCAAAGAGAAGGAAATTTTGCAAAGGCTGGTGA
ACTGAGATATGCCACCATTCCGAGTCTCGAAGCCAAGCTGCCTAAAGAGG
GCGAAGAGCAAGCCACAAAGGCCCAGACTAGTCTCATTCACGACTCCGTC
ACCGCTGATGACATTGGAAACGTGGTCTCTCGGACTACTGGCATCCCTGT
CAACAAGCTAATGGCCGGTGAGGTGGAGAAACTCATCAAAATGGAAGACA
CCCTACGCAAATCCGTTCGTGGACAGGACGAGGCTCTCTCCGCAGTTGCA
AATGCAGTCCGCATGCAAAGAGCAGGCCTTAGCGGAGAGAATCGACCCCT
CGCCTCGTTCATGTTCCTTGGTCCTACGGGTGTTGGCAAGACAGAGCTCT
GCAAGAAGATGGCTGAGTTCCTGTTCTCCACGGAGACAGCTGTTGTTCGG
TTCGACATGAGCGAATTCCAAGAAAAGCACACTATCAGTCGTTTGATCGG
CTCTCCAGCCGGCTATGTTGGATACGATGACGCCGGTCAACTTACAGAGG
CCGTGAGGAGGAAGCCCTACGCAGTTCTGCTATTCGATGAATTTGAGAAG
GCGCATCGCGACATCTCTGCTTTACTGTTGCAAGTCCTTGATGAGGGGTT
CCTCACAGATTCTCAGGGCCATAAGGTTGACTTTAGGAATACTCTGATTG
TTCTAACATCGAATCTTGGCGCCGACATTCTTGTAGGTGCCGATCCTTTG
CACCCCTACAAGGAAGGTGGCGATAACGAGCTTTCGCCTGAAACCAAAAA
GTCGGTTATGGATGTTGTACAGTCGGCCTATCCGCCAGAGTTCCTCAACC
GTATCGACGAGTTTATTATTTTCAAGAGGCTGTCCCGCGACGCTCTGAGG
GATATTGTTGATATCAGAGTGAAGGAGCTGCAATCACGTCTCGACGACCG
CCGAATGACTCTTCAAGTTGACGACGAGATCAAAGACTGGCTTTGCGACA
AGGGCTATGATCCTAAATACGGAGCTCGGCCCCTCAACCGCTTGATCGCC
AAAGAAATCGGCAACAAGCTGGCTGATAAGATCATCCGCGGCGAAGTCAC
GTCTGGGCAAACCGCTCGTGTCACGTTCAATGCAGACAAGAGTGGACTTG
CAGTAGCAGCAGAAGCCCCGGTGGCGACAGAAACTGAAAGCTCATAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2497800..2500196-

>CAN33_46160-T1 ID=CAN33_46160-T1|Name=CAN33_46160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2397bp|location=Sequence derived from alignment at NKJJ01000022.1:2497800..2500196- (Aspergillus niger FDAARGOS_311)
ATGTCGTCAAGGTTACAACTCGCTCGGGGTCGGCTTCTCCGGCCATCCTC
CCTACCGTCATCGAACCGCGTTCTTCAACCTTCTCAAGCATTGCGTCTAC
TTGCGCGCACCCGGATCGCGAATCTCGCCCGGCACCCGTCCGTCTTGCCT
ATACGCACTTATGCCAATGGCCGCCCTCATCCTCCCGGAGGCACACATCG
CATGAACCTTGGTGGTGAACCAGAAAAGTCAGCCTTGGAACAGTTCGGTG
TCGACCTTACAGCCAGGGCTAAGGCAGGCAAGCTGGACCCGGTCATTGGA
CGTGATGCCGAAATCCATCGCACCATTCAGGTTCTCTCCAGACGAACGAA
AAACAACCCCGTTCTGATTGGAGCTGCGGGTACCGGAAAAACTGCGGTCT
TGGAGGGTTTGGCACAGAGGATTGTTCAGGGAGACGTTCCAGAGAGCATC
AAGGACAAACGTGTTATTGCGCTGGATCTGGGTTCTCTCATTGCTGGTGC
TAAGTTCAGAGGTGATTTTGAAGAGCGGTTGAAATCTGTTCTTAAGGAGG
TCGAGGATGCGCAAGGGGGTGTAATCCTCTTCATTGATGAGCTTCATACC
TTACTTGGCTTGGGAAAGGCGGAAGGCAGTATCGACGCCAGCAACCTTCT
GAAACCGGCTTTGTCTCGCGGTGAGCTGCAATGTTGCGGTGCCACGACTT
TGAACGAGTACAGGTTGATTGAGAAGGACGTGGCTTTGGCTAGACGCTTC
CAGCCTATCCAAGTCGGGGAGCCCTCGGTTGCTGCTACTATATCCATCTT
GCGTGGTATCAAGAACAAGTATGAAGTGCACCATGGTGTCCGAATCACGG
ATGGTGCTTTGGTGGCGGCGGCAACTTACAGCAACCGGTACATCACGGAT
CGGTTCCTTCCCGATAAGGCGATTGATCTGGTAGACGAGGCGGCGTCCGC
CTTGCGACTACAGCAAGAATCGAAGCCCGATGTGATCAGAGAGCTCGACC
GCGATATTACCACCATCCAAATTGAGCTCGAGTCGCTTCGCAAGGAGACT
GACGTCAGTAGCCGCGAAAGAAGAGATAAACTTCAGGAAGACCTGAAAGT
CAAACAAGAAGAAGCGAGGAAATTGACTGAGGTATGGGAGAAGGAGAAAG
CAGAAATCGAAGAACTCAAGCGTGCCAAAGAGGAGCTGGAGCGTGCTCGT
TTCGAATTGGAGAAAGCTCAAAGAGAAGGAAATTTTGCAAAGGCTGGTGA
ACTGAGATATGCCACCATTCCGAGTCTCGAAGCCAAGCTGCCTAAAGAGG
GCGAAGAGCAAGCCACAAAGGCCCAGACTAGTCTCATTCACGACTCCGTC
ACCGCTGATGACATTGGAAACGTGGTCTCTCGGACTACTGGCATCCCTGT
CAACAAGCTAATGGCCGGTGAGGTGGAGAAACTCATCAAAATGGAAGACA
CCCTACGCAAATCCGTTCGTGGACAGGACGAGGCTCTCTCCGCAGTTGCA
AATGCAGTCCGCATGCAAAGAGCAGGCCTTAGCGGAGAGAATCGACCCCT
CGCCTCGTTCATGTTCCTTGGTCCTACGGGTGTTGGCAAGACAGAGCTCT
GCAAGAAGATGGCTGAGTTCCTGTTCTCCACGGAGACAGCTGTTGTTCGG
TTCGACATGAGCGAATTCCAAGAAAAGCACACTATCAGTCGTTTGATCGG
CTCTCCAGCCGGCTATGTTGGATACGATGACGCCGGTCAACTTACAGAGG
CCGTGAGGAGGAAGCCCTACGCAGTTCTGCTATTCGATGAATTTGAGAAG
GCGCATCGCGACATCTCTGCTTTACTGTTGCAAGTCCTTGATGAGGGGTT
CCTCACAGATTCTCAGGGCCATAAGGTTGACTTTAGGAATACTCTGATTG
TTCTAACATCGAATCTTGGCGCCGACATTCTTGTAGGTGCCGATCCTTTG
CACCCCTACAAGGAAGGTGGCGATAACGAGCTTTCGCCTGAAACCAAAAA
GTCGGTTATGGATGTTGTACAGTCGGCCTATCCGCCAGAGTTCCTCAACC
GTATCGACGAGTTTATTATTTTCAAGAGGCTGTCCCGCGACGCTCTGAGG
GATATTGTTGATATCAGAGTGAAGGAGCTGCAATCACGTCTCGACGACCG
CCGAATGACTCTTCAAGTTGACGACGAGATCAAAGACTGGCTTTGCGACA
AGGGCTATGATCCTAAATACGGAGCTCGGCCCCTCAACCGCTTGATCGCC
AAAGAAATCGGCAACAAGCTGGCTGATAAGATCATCCGCGGCGAAGTCAC
GTCTGGGCAAACCGCTCGTGTCACGTTCAATGCAGACAAGAGTGGACTTG
CAGTAGCAGCAGAAGCCCCGGTGGCGACAGAAACTGAAAGCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HSP78CAN33_46160Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46160-T1.cdsCAN33_46160-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46160-T1.exon1CAN33_46160-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46160-T1CAN33_46160-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR018368
DBxrefInterPro:IPR028299
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR041546
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR019489
DBxrefInterPro:IPR001270
DBxrefPFAM:PF00158
DBxrefPFAM:PF10431
DBxrefPFAM:PF17871
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Productchaperone ATPase hsp78
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2497800..2500196 -
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