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CAN33_46165-T1, CAN33_46165-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46165-T1
Unique NameCAN33_46165-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2500597..2501719+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46165-T1 ID=CAN33_46165-T1|Name=CAN33_46165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1123bp|location=Sequence derived from alignment at NKJJ01000022.1:2500597..2501719+ (Aspergillus niger FDAARGOS_311)
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCGTATGTTCAC
ATTTTCCCTCTCTTTTTTATCATTTCCCTTTCCAATCTGCTCTCAGCAGT
AACTAATGGTACCCCTCAGTTGCCAACAACTACCTGGCTACCAGGAGCTA
CATTGTTGGGTAAGGCACACCTTTAGGGATCCTTCCCCCCTCCCCCCTTA
GCATTGGTGCCTTGTGAAAGATTCTTCCTTGTTTGCATGATGAAAAGAAA
TTGGTCCGTGTTTATGAGGCGGCTTAAGACCCCGCTGCAAGATTAAACAC
AATTGCGAGCAATCGCGTTTCTGATTACTTGGAAAAATTCTTCTTTGCTT
TTTGTTTTCCGTCGTTCATGGATATAATCACTAGCGATGATGGTGGCATG
AAGCTAACTGGAATATAGCGATGCTCCTTCCCAGGCCGATGTCGTGACCT
TCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCT
CGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCC
CGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCGAGTCCACTGAGCT
GCCCACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCG
GCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCT
CGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGC
CAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGGTATGTTCCATCTTC
CATTTTTGGATCTTGTGTATGATTCTAACTCGCTACAGATGATGAGACCG
ACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTT
GTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCT
CCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCC
AGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGTA
AGTAAAGATGAACACCTAGGGCGTCGTGATGATGCTAATGAAACCCCAAC
AGGCTGCCATGCAGAAGCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2500597..2501719+

>CAN33_46165-T1 ID=CAN33_46165-T1|Name=CAN33_46165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3456bp|location=Sequence derived from alignment at NKJJ01000022.1:2500597..2501719+ (Aspergillus niger FDAARGOS_311)
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGCCAACAA
CTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCCAGGCCG
ATGTCGTGACCTTCAAGGCCTTCTCCGCCCTACACTGCCTACGGCCCGAG
TCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGACAT
GGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGG
AGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCC
AAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGATGA
TGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGATCG
ACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATC
AAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGA
TGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCACCG
ATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATCTCGCTTCC
GAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGGAGCTACAT
TGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTTCT
CCGCCCTACACTGCCTACGGCCCGAGTCCACTGAGCTGCCCACCAACCCC
AAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCTCCGACGAGGA
GGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGT
ACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTG
ACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTGAGACTATGGA
GGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCCTCCA
AGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCTTGTC
GTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAGGA
GGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATGCAGAAGCTGT
AAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGCCAAC
AACTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCCAGGC
CGATGTCGTGACCTTCAAGGCCTTCTCCGCCCTACACTGCCTACGGCCCG
AGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGAC
ATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAA
GGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGC
CCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGAT
GATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGAT
CGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTA
TCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTT
GATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCAC
CGATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATCTCGCTT
CCGAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGGAGCTAC
ATTGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTT
CTCCGCCCTACACTGCCTACGGCCCGAGTCCACTGAGCTGCCCACCAACC
CCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCTCCGACGAG
GAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCTGA
GTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCTCG
TGACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTGAGACTATG
GAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCCTC
CAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCTTG
TCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAG
GAGGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATGCAGAAGCT
GTAAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGCCA
ACAACTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCCAG
GCCGATGTCGTGACCTTCAAGGCCTTCTCCGCCCTACACTGCCTACGGCC
CGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACG
ACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTC
AAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAA
GCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGG
ATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAG
ATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGG
TATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCC
TTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCC
ACCGATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATCTCGC
TTCCGAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGGAGCT
ACATTGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAAGGCC
TTCTCCGCCCTACACTGCCTACGGCCCGAGTCCACTGAGCTGCCCACCAA
CCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCTCCGACG
AGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCT
GAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCT
CGTGACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTGAGACTA
TGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCC
TCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCT
TGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCG
AGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATGCAGAAG
CTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46165CAN33_46165Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46165-T1CAN33_46165-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46165-T1.exon1CAN33_46165-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46165-T1.exon2CAN33_46165-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46165-T1.exon3CAN33_46165-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46165-T1.exon4CAN33_46165-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_46165-T1.exon5CAN33_46165-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_46165-T1.exon6CAN33_46165-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46165-T1.cdsCAN33_46165-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR036219
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR001326
DBxrefInterPro:IPR014717
DBxrefInterPro:IPR018940
DBxrefInterPro:IPR014038
DBxrefPFAM:PF00736
DBxrefPFAM:PF10587
ProductEF-1 guanine nucleotide exchange domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2500597..2501719 +
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