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CAN33_46255-T1, CAN33_46255-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46255-T1
Unique NameCAN33_46255-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2558109..2559259+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46255-T1 ID=CAN33_46255-T1|Name=CAN33_46255-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1151bp|location=Sequence derived from alignment at NKJJ01000022.1:2558109..2559259+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCCAAGTGTGTCCACAAGGGCTGCGGGAAGGAATTCACCGACGC
CGACGAGCCCTGCGTCTATCATCCTGGCCCGCCGGTGTTCCACGAAGGAC
AAAAAGGTACTTAAAACAGATAACTCCAAGGGGGACCTTGGGAGCAGTTG
ATCCACTGTCTATTTGATCTTCCTGACTGAGTTCCACACTCCACACAACC
GCATTTACATACTAACTGAATCACCCCGCAGGCTGGAAATGCTGCAAACC
CCGCGTCCTCACCTTCGACGAATTCCTCGCCATCCCTCCCTGCACCACAG
GCAAACACTCCACCGTCGACGACACCCCCGTCGAGGCCCCCAAACCCGCC
GCTGATGTACCCTCACCTGCTGCTACTCCCGCCCCAGCGCCGCCGCCGCC
ACTCCCCGCGCCCCGTCAACTCCCCCGCCATCCCTCCTCCCTCGAACGCA
CCCACCCCTGTGCCCGAAGAACCTGACTCCGATGACCCGGAGCTAGCGAT
CCCCGCGAACGCGACTTGTCGTCGCCGCGGCTGTAATGCAGGCTACGATG
CGAGCGTCTCGCGCGACGAGGAGAAGTGCGTGTATCATCCGGGTCAGCCG
ATCTTCCACGAGGGAAGCAAGGGCTGGTCCTGCTGCAAGAAGCGGGTGCT
GGAGTTTGATGAGTTCTTGAAGATTCAGGGCTGTTCGGAGAAGAAGAAGC
ATCTTTTTGTGGGGAAGGGGAAGCCCCCGGGTGAGGAGAAGGTGGAGTCT
GTGAGGTGAGTTCCTATCCTCTCTTTCTACAGCCGTGGGTGATTGCTACG
GGGTGACAGTATACTAATATGTGGCGATTGATGTACAGGAACGATTTCTA
CCAAACCGCCTCCTCCGTGAACGTGTCGCTCTACCTGAAGAAGATCAACA
AGGACACCGCCAAGGTCGAGTTCAAGGCTACGTCGATCGAGCTGGACCTC
CCTACGACGGATAACAAGCGCTACACGGATTCATATGAGTTGTTTGCACC
CATTGATCCCGAGCAGTCCAAGTTCCGCGTGCTGGGCACTAAGCTGGAGC
TGACGCTGGTCAAGGCGGACGGGACGAGCTGGCCGGTGCTGCGTCGTGAT
GACAAGTGGTCGGGAGAGAGAATCCAGATTGGAAATGCTGGTCGGGTGTA
A
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2558109..2559259+

>CAN33_46255-T1 ID=CAN33_46255-T1|Name=CAN33_46255-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3648bp|location=Sequence derived from alignment at NKJJ01000022.1:2558109..2559259+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCCAAGTGTGTCCACAAGGGCTGCGGGAAGGAATTCACCGACGC
CGACGAGCCCTGCGTCTATCATCCTGGCCCGCCGGTGTTCCACGAAGGAC
AAAAAGGCTGGAAATGCTGCAAACCCCGCGTCCTCACCTTCGACGAATTC
CTCGCCATCCCTCCCTGCACCACAGGCAAACACTCCACCGTCGACGACAC
CCCCGTCGAGGCCCCCAAACCCGCCGCTGATCGCCGCCGCCGCCACTCCC
CGCGCCCCGTCAACTCCCCCGCCATCCCTCCTCCCTCGAACGCACCCACC
CCTGTGCCCGAAGAACCTGACTCCGATGACCCGGAGCTAGCGATCCCCGC
GAACGCGACTTGTCGTCGCCGCGGCTGTAATGCAGGCTACGATGCGAGCG
TCTCGCGCGACGAGGAGAAGTGCGTGTATCATCCGGGTCAGCCGATCTTC
CACGAGGGAAGCAAGGGCTGGTCCTGCTGCAAGAAGCGGGTGCTGGAGTT
TGATGAGTTCTTGAAGATTCAGGGCTGTTCGGAGAAGAAGAAGCATCTTT
TTGTGGGGAAGGGGAAGCCCCCGGGTGAGGAGAAGGTGGAGTCTGTGAGG
AACGATTTCTACCAAACCGCCTCCTCCGTGAACGTGTCGCTCTACCTGAA
GAAGATCAACAAGGACACCGCCAAGGTCGAGTTCAAGGCTACGTCGATCG
AGCTGGACCTCCCTACGACGGATAACAAGCGCTACACGGATTCATATGAG
TTGTTTGCACCCATTGATCCCGAGCAGTCCAAGTTCCGCGTGCTGGGCAC
TAAGCTGGAGCTGACGCTGGTCAAGGCGGACGGGACGAGCTGGCCGGTGC
TGCGTCGTGATGACAAGTGGTCGGGAGAGAGAATCCAGATTGGAAATGCT
GGTCGGGTGTAAATGGCCTCCAAGTGTGTCCACAAGGGCTGCGGGAAGGA
ATTCACCGACGCCGACGAGCCCTGCGTCTATCATCCTGGCCCGCCGGTGT
TCCACGAAGGACAAAAAGGCTGGAAATGCTGCAAACCCCGCGTCCTCACC
TTCGACGAATTCCTCGCCATCCCTCCCTGCACCACAGGCAAACACTCCAC
CGTCGACGACACCCCCGTCGAGGCCCCCAAACCCGCCGCTGATCGCCGCC
GCCGCCACTCCCCGCGCCCCGTCAACTCCCCCGCCATCCCTCCTCCCTCG
AACGCACCCACCCCTGTGCCCGAAGAACCTGACTCCGATGACCCGGAGCT
AGCGATCCCCGCGAACGCGACTTGTCGTCGCCGCGGCTGTAATGCAGGCT
ACGATGCGAGCGTCTCGCGCGACGAGGAGAAGTGCGTGTATCATCCGGGT
CAGCCGATCTTCCACGAGGGAAGCAAGGGCTGGTCCTGCTGCAAGAAGCG
GGTGCTGGAGTTTGATGAGTTCTTGAAGATTCAGGGCTGTTCGGAGAAGA
AGAAGCATCTTTTTGTGGGGAAGGGGAAGCCCCCGGGTGAGGAGAAGGTG
GAGTCTGTGAGGAACGATTTCTACCAAACCGCCTCCTCCGTGAACGTGTC
GCTCTACCTGAAGAAGATCAACAAGGACACCGCCAAGGTCGAGTTCAAGG
CTACGTCGATCGAGCTGGACCTCCCTACGACGGATAACAAGCGCTACACG
GATTCATATGAGTTGTTTGCACCCATTGATCCCGAGCAGTCCAAGTTCCG
CGTGCTGGGCACTAAGCTGGAGCTGACGCTGGTCAAGGCGGACGGGACGA
GCTGGCCGGTGCTGCGTCGTGATGACAAGTGGTCGGGAGAGAGAATCCAG
ATTGGAAATGCTGGTCGGGTGTAAATGGCCTCCAAGTGTGTCCACAAGGG
CTGCGGGAAGGAATTCACCGACGCCGACGAGCCCTGCGTCTATCATCCTG
GCCCGCCGGTGTTCCACGAAGGACAAAAAGGCTGGAAATGCTGCAAACCC
CGCGTCCTCACCTTCGACGAATTCCTCGCCATCCCTCCCTGCACCACAGG
CAAACACTCCACCGTCGACGACACCCCCGTCGAGGCCCCCAAACCCGCCG
CTGATCGCCGCCGCCGCCACTCCCCGCGCCCCGTCAACTCCCCCGCCATC
CCTCCTCCCTCGAACGCACCCACCCCTGTGCCCGAAGAACCTGACTCCGA
TGACCCGGAGCTAGCGATCCCCGCGAACGCGACTTGTCGTCGCCGCGGCT
GTAATGCAGGCTACGATGCGAGCGTCTCGCGCGACGAGGAGAAGTGCGTG
TATCATCCGGGTCAGCCGATCTTCCACGAGGGAAGCAAGGGCTGGTCCTG
CTGCAAGAAGCGGGTGCTGGAGTTTGATGAGTTCTTGAAGATTCAGGGCT
GTTCGGAGAAGAAGAAGCATCTTTTTGTGGGGAAGGGGAAGCCCCCGGGT
GAGGAGAAGGTGGAGTCTGTGAGGAACGATTTCTACCAAACCGCCTCCTC
CGTGAACGTGTCGCTCTACCTGAAGAAGATCAACAAGGACACCGCCAAGG
TCGAGTTCAAGGCTACGTCGATCGAGCTGGACCTCCCTACGACGGATAAC
AAGCGCTACACGGATTCATATGAGTTGTTTGCACCCATTGATCCCGAGCA
GTCCAAGTTCCGCGTGCTGGGCACTAAGCTGGAGCTGACGCTGGTCAAGG
CGGACGGGACGAGCTGGCCGGTGCTGCGTCGTGATGACAAGTGGTCGGGA
GAGAGAATCCAGATTGGAAATGCTGGTCGGGTGTAAATGGCCTCCAAGTG
TGTCCACAAGGGCTGCGGGAAGGAATTCACCGACGCCGACGAGCCCTGCG
TCTATCATCCTGGCCCGCCGGTGTTCCACGAAGGACAAAAAGGCTGGAAA
TGCTGCAAACCCCGCGTCCTCACCTTCGACGAATTCCTCGCCATCCCTCC
CTGCACCACAGGCAAACACTCCACCGTCGACGACACCCCCGTCGAGGCCC
CCAAACCCGCCGCTGATCGCCGCCGCCGCCACTCCCCGCGCCCCGTCAAC
TCCCCCGCCATCCCTCCTCCCTCGAACGCACCCACCCCTGTGCCCGAAGA
ACCTGACTCCGATGACCCGGAGCTAGCGATCCCCGCGAACGCGACTTGTC
GTCGCCGCGGCTGTAATGCAGGCTACGATGCGAGCGTCTCGCGCGACGAG
GAGAAGTGCGTGTATCATCCGGGTCAGCCGATCTTCCACGAGGGAAGCAA
GGGCTGGTCCTGCTGCAAGAAGCGGGTGCTGGAGTTTGATGAGTTCTTGA
AGATTCAGGGCTGTTCGGAGAAGAAGAAGCATCTTTTTGTGGGGAAGGGG
AAGCCCCCGGGTGAGGAGAAGGTGGAGTCTGTGAGGAACGATTTCTACCA
AACCGCCTCCTCCGTGAACGTGTCGCTCTACCTGAAGAAGATCAACAAGG
ACACCGCCAAGGTCGAGTTCAAGGCTACGTCGATCGAGCTGGACCTCCCT
ACGACGGATAACAAGCGCTACACGGATTCATATGAGTTGTTTGCACCCAT
TGATCCCGAGCAGTCCAAGTTCCGCGTGCTGGGCACTAAGCTGGAGCTGA
CGCTGGTCAAGGCGGACGGGACGAGCTGGCCGGTGCTGCGTCGTGATGAC
AAGTGGTCGGGAGAGAGAATCCAGATTGGAAATGCTGGTCGGGTGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46255CAN33_46255Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46255-T1.exon1CAN33_46255-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46255-T1.exon2CAN33_46255-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46255-T1.exon3CAN33_46255-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46255-T1.exon4CAN33_46255-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46255-T1.cdsCAN33_46255-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46255-T1CAN33_46255-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007051
DBxrefInterPro:IPR007052
DBxrefInterPro:IPR008978
DBxrefPFAM:PF04969
DBxrefPFAM:PF04968
ProductCHORD family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2558109..2559259 +
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