You are here

Home

CAN33_46290-T1, CAN33_46290-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46290-T1
Unique NameCAN33_46290-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2577189..2578396-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46290-T1 ID=CAN33_46290-T1|Name=CAN33_46290-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1208bp|location=Sequence derived from alignment at NKJJ01000022.1:2577189..2578396- (Aspergillus niger FDAARGOS_311)
ATGGTCCAAACTCAGGCTCCCGGAAAGTCGGTCCGCTTGGCTACCGCATG
CACCGAGTGTCAGCGTCGGAAGCAGAAGGCAAGCATCCGAACCTATCATG
AACCTCGAGCAGCTTGAGTACATGTACTAACACTACGGTATATAGTGCAG
CCGGGAATGGCCCTGCAATCACTGCCAAGCACGAAGGATTGCTCATCTCT
GTAAATTCACACCGAAAAAGGTGCTCAAGGCTAAGCCTGTCTGTAATGAT
CCAAGGTCCGCTCAAGTAGATGCCTCGATTGTCGTATTTCACTGTTGACA
CTCGCAGGGCCATAGATGTGTCACTGAGCGACAATGGACAAAGCCTTACA
GAAGCTCCGGGCTCAGTCGTGTCGGGCATCGCCACCGGGGATGATTTCCG
CATGCTGGGATACCTCCCCGATAGCGATGATCAACTTGCAAATGGCGCTG
AGCAATCTGTAAGACTGCAAGTTCGTCTAGCATTGGCCATATGCTAAAGT
ACTTTTGTATACAGCAATCAGCTGCATTATCACCCTCCCAAGGACTCGTA
TCGCCCGAATTGGAAAAAGCAATTCGCACTATTCCCCCAAAACCTTATAC
AGGTAAATGTGGCGACGGCTCTTCGTGATAGCCTGCTTACTTGTGCGACT
TGTGCCAGATACCCTGGTGCAGTACTTTCTGAGTGAGATGAATGACCAGT
ACTATTGCCTTTACCCACCGACTTTTTCGCACGACTATGCGACGTGGTGG
TCAGGGAAAGCCAATGGCCAGTCATTGACACCCGCCTTTACAGCCCTGCT
GCTGCATGTTTGCGCCTGCGCTGTTCTCTACCTGGATGTCGAGACGCGAC
AGCAACTGGAGAGTGATTTGGGCGAAAATTATGCCAGTCTTTCCGAGCAG
TACCATCGTACTGCCAAGCAGCTCAGCAACGCCATTGGACCAGGAAAAGG
CGGATTGACACAAGTACAGCAACTCTTCCTTGGTGCAATATGGTACAAGA
CCGAAGCATTATTTGTCGAGTCATGGCACGCCTTGGGGGCTGCAATTCAC
GAAGCCCAAGAACTAGGTCAGTGTCCTCGTACATCTAGCCAGTCGGATAC
TGATCCGGAATAGGAATGCATCGTAGCTCCTCCAAAGCAAAGGTGTCTGA
ATTCGAACGGGAGATGCGAAGACGGATATGGTGTCTTCTTTACACCTGGG
ACTGGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2577189..2578396-

>CAN33_46290-T1 ID=CAN33_46290-T1|Name=CAN33_46290-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5292bp|location=Sequence derived from alignment at NKJJ01000022.1:2577189..2578396- (Aspergillus niger FDAARGOS_311)
GAATGCATCGTAGCTCCTCCAAAGCAAAGGTGTCTGAATTCGAACGGGAG
ATGCGAAGACGGATATGGTGTCTTCTTTACACCTGGGACTGGTAAATACC
CTGGTGCAGTACTTTCTGAGTGAGATGAATGACCAGTACTATTGCCTTTA
CCCACCGACTTTTTCGCACGACTATGCGACGTGGTGGTCAGGGAAAGCCA
ATGGCCAGTCATTGACACCCGCCTTTACAGCCCTGCTGCTGCATGTTTGC
GCCTGCGCTGTTCTCTACCTGGATGTCGAGACGCGACAGCAACTGGAGAG
TGATTTGGGCGAAAATTATGCCAGTCTTTCCGAGCAGTACCATCGTACTG
CCAAGCAGCTCAGCAACGCCATTGGACCAGGAAAAGGCGGATTGACACAA
GTACAGCAACTCTTCCTTGGTGCAATATGGTACAAGACCGAAGCATTATT
TGTCGAGTCATGGCACGCCTTGGGGGCTGCAATTCACGAAGCCCAAGAAC
TAGCAATCAGCTGCATTATCACCCTCCCAAGGACTCGTATCGCCCGAATT
GGAAAAAGCAATTCGCACTATTCCCCCAAAACCTTATACAGGGCCATAGA
TGTGTCACTGAGCGACAATGGACAAAGCCTTACAGAAGCTCCGGGCTCAG
TCGTGTCGGGCATCGCCACCGGGGATGATTTCCGCATGCTGGGATACCTC
CCCGATAGCGATGATCAACTTGCAAATGGCGCTGAGCAATCTTGCAGCCG
GGAATGGCCCTGCAATCACTGCCAAGCACGAAGGATTGCTCATCTCTGTA
AATTCACACCGAAAAAGGTGCTCAAGGCTAAGCCTGTCTGTAATGATCCA
AGATGGTCCAAACTCAGGCTCCCGGAAAGTCGGAATGCATCGTAGCTCCT
CCAAAGCAAAGGTGTCTGAATTCGAACGGGAGATGCGAAGACGGATATGG
TGTCTTCTTTACACCTGGGACTGGTAAATACCCTGGTGCAGTACTTTCTG
AGTGAGATGAATGACCAGTACTATTGCCTTTACCCACCGACTTTTTCGCA
CGACTATGCGACGTGGTGGTCAGGGAAAGCCAATGGCCAGTCATTGACAC
CCGCCTTTACAGCCCTGCTGCTGCATGTTTGCGCCTGCGCTGTTCTCTAC
CTGGATGTCGAGACGCGACAGCAACTGGAGAGTGATTTGGGCGAAAATTA
TGCCAGTCTTTCCGAGCAGTACCATCGTACTGCCAAGCAGCTCAGCAACG
CCATTGGACCAGGAAAAGGCGGATTGACACAAGTACAGCAACTCTTCCTT
GGTGCAATATGGTACAAGACCGAAGCATTATTTGTCGAGTCATGGCACGC
CTTGGGGGCTGCAATTCACGAAGCCCAAGAACTAGCAATCAGCTGCATTA
TCACCCTCCCAAGGACTCGTATCGCCCGAATTGGAAAAAGCAATTCGCAC
TATTCCCCCAAAACCTTATACAGGGCCATAGATGTGTCACTGAGCGACAA
TGGACAAAGCCTTACAGAAGCTCCGGGCTCAGTCGTGTCGGGCATCGCCA
CCGGGGATGATTTCCGCATGCTGGGATACCTCCCCGATAGCGATGATCAA
CTTGCAAATGGCGCTGAGCAATCTTGCAGCCGGGAATGGCCCTGCAATCA
CTGCCAAGCACGAAGGATTGCTCATCTCTGTAAATTCACACCGAAAAAGG
TGCTCAAGGCTAAGCCTGTCTGTAATGATCCAAGATGGTCCAAACTCAGG
CTCCCGGAAAGTCGGAATGCATCGTAGCTCCTCCAAAGCAAAGGTGTCTG
AATTCGAACGGGAGATGCGAAGACGGATATGGTGTCTTCTTTACACCTGG
GACTGGTAAATACCCTGGTGCAGTACTTTCTGAGTGAGATGAATGACCAG
TACTATTGCCTTTACCCACCGACTTTTTCGCACGACTATGCGACGTGGTG
GTCAGGGAAAGCCAATGGCCAGTCATTGACACCCGCCTTTACAGCCCTGC
TGCTGCATGTTTGCGCCTGCGCTGTTCTCTACCTGGATGTCGAGACGCGA
CAGCAACTGGAGAGTGATTTGGGCGAAAATTATGCCAGTCTTTCCGAGCA
GTACCATCGTACTGCCAAGCAGCTCAGCAACGCCATTGGACCAGGAAAAG
GCGGATTGACACAAGTACAGCAACTCTTCCTTGGTGCAATATGGTACAAG
ACCGAAGCATTATTTGTCGAGTCATGGCACGCCTTGGGGGCTGCAATTCA
CGAAGCCCAAGAACTAGCAATCAGCTGCATTATCACCCTCCCAAGGACTC
GTATCGCCCGAATTGGAAAAAGCAATTCGCACTATTCCCCCAAAACCTTA
TACAGGGCCATAGATGTGTCACTGAGCGACAATGGACAAAGCCTTACAGA
AGCTCCGGGCTCAGTCGTGTCGGGCATCGCCACCGGGGATGATTTCCGCA
TGCTGGGATACCTCCCCGATAGCGATGATCAACTTGCAAATGGCGCTGAG
CAATCTTGCAGCCGGGAATGGCCCTGCAATCACTGCCAAGCACGAAGGAT
TGCTCATCTCTGTAAATTCACACCGAAAAAGGTGCTCAAGGCTAAGCCTG
TCTGTAATGATCCAAGATGGTCCAAACTCAGGCTCCCGGAAAGTCGGAAT
GCATCGTAGCTCCTCCAAAGCAAAGGTGTCTGAATTCGAACGGGAGATGC
GAAGACGGATATGGTGTCTTCTTTACACCTGGGACTGGTAAATACCCTGG
TGCAGTACTTTCTGAGTGAGATGAATGACCAGTACTATTGCCTTTACCCA
CCGACTTTTTCGCACGACTATGCGACGTGGTGGTCAGGGAAAGCCAATGG
CCAGTCATTGACACCCGCCTTTACAGCCCTGCTGCTGCATGTTTGCGCCT
GCGCTGTTCTCTACCTGGATGTCGAGACGCGACAGCAACTGGAGAGTGAT
TTGGGCGAAAATTATGCCAGTCTTTCCGAGCAGTACCATCGTACTGCCAA
GCAGCTCAGCAACGCCATTGGACCAGGAAAAGGCGGATTGACACAAGTAC
AGCAACTCTTCCTTGGTGCAATATGGTACAAGACCGAAGCATTATTTGTC
GAGTCATGGCACGCCTTGGGGGCTGCAATTCACGAAGCCCAAGAACTAGC
AATCAGCTGCATTATCACCCTCCCAAGGACTCGTATCGCCCGAATTGGAA
AAAGCAATTCGCACTATTCCCCCAAAACCTTATACAGGGCCATAGATGTG
TCACTGAGCGACAATGGACAAAGCCTTACAGAAGCTCCGGGCTCAGTCGT
GTCGGGCATCGCCACCGGGGATGATTTCCGCATGCTGGGATACCTCCCCG
ATAGCGATGATCAACTTGCAAATGGCGCTGAGCAATCTTGCAGCCGGGAA
TGGCCCTGCAATCACTGCCAAGCACGAAGGATTGCTCATCTCTGTAAATT
CACACCGAAAAAGGTGCTCAAGGCTAAGCCTGTCTGTAATGATCCAAGAT
GGTCCAAACTCAGGCTCCCGGAAAGTCGGAATGCATCGTAGCTCCTCCAA
AGCAAAGGTGTCTGAATTCGAACGGGAGATGCGAAGACGGATATGGTGTC
TTCTTTACACCTGGGACTGGTAAATACCCTGGTGCAGTACTTTCTGAGTG
AGATGAATGACCAGTACTATTGCCTTTACCCACCGACTTTTTCGCACGAC
TATGCGACGTGGTGGTCAGGGAAAGCCAATGGCCAGTCATTGACACCCGC
CTTTACAGCCCTGCTGCTGCATGTTTGCGCCTGCGCTGTTCTCTACCTGG
ATGTCGAGACGCGACAGCAACTGGAGAGTGATTTGGGCGAAAATTATGCC
AGTCTTTCCGAGCAGTACCATCGTACTGCCAAGCAGCTCAGCAACGCCAT
TGGACCAGGAAAAGGCGGATTGACACAAGTACAGCAACTCTTCCTTGGTG
CAATATGGTACAAGACCGAAGCATTATTTGTCGAGTCATGGCACGCCTTG
GGGGCTGCAATTCACGAAGCCCAAGAACTAGCAATCAGCTGCATTATCAC
CCTCCCAAGGACTCGTATCGCCCGAATTGGAAAAAGCAATTCGCACTATT
CCCCCAAAACCTTATACAGGGCCATAGATGTGTCACTGAGCGACAATGGA
CAAAGCCTTACAGAAGCTCCGGGCTCAGTCGTGTCGGGCATCGCCACCGG
GGATGATTTCCGCATGCTGGGATACCTCCCCGATAGCGATGATCAACTTG
CAAATGGCGCTGAGCAATCTTGCAGCCGGGAATGGCCCTGCAATCACTGC
CAAGCACGAAGGATTGCTCATCTCTGTAAATTCACACCGAAAAAGGTGCT
CAAGGCTAAGCCTGTCTGTAATGATCCAAGATGGTCCAAACTCAGGCTCC
CGGAAAGTCGGAATGCATCGTAGCTCCTCCAAAGCAAAGGTGTCTGAATT
CGAACGGGAGATGCGAAGACGGATATGGTGTCTTCTTTACACCTGGGACT
GGTAAATACCCTGGTGCAGTACTTTCTGAGTGAGATGAATGACCAGTACT
ATTGCCTTTACCCACCGACTTTTTCGCACGACTATGCGACGTGGTGGTCA
GGGAAAGCCAATGGCCAGTCATTGACACCCGCCTTTACAGCCCTGCTGCT
GCATGTTTGCGCCTGCGCTGTTCTCTACCTGGATGTCGAGACGCGACAGC
AACTGGAGAGTGATTTGGGCGAAAATTATGCCAGTCTTTCCGAGCAGTAC
CATCGTACTGCCAAGCAGCTCAGCAACGCCATTGGACCAGGAAAAGGCGG
ATTGACACAAGTACAGCAACTCTTCCTTGGTGCAATATGGTACAAGACCG
AAGCATTATTTGTCGAGTCATGGCACGCCTTGGGGGCTGCAATTCACGAA
GCCCAAGAACTAGCAATCAGCTGCATTATCACCCTCCCAAGGACTCGTAT
CGCCCGAATTGGAAAAAGCAATTCGCACTATTCCCCCAAAACCTTATACA
GGGCCATAGATGTGTCACTGAGCGACAATGGACAAAGCCTTACAGAAGCT
CCGGGCTCAGTCGTGTCGGGCATCGCCACCGGGGATGATTTCCGCATGCT
GGGATACCTCCCCGATAGCGATGATCAACTTGCAAATGGCGCTGAGCAAT
CTTGCAGCCGGGAATGGCCCTGCAATCACTGCCAAGCACGAAGGATTGCT
CATCTCTGTAAATTCACACCGAAAAAGGTGCTCAAGGCTAAGCCTGTCTG
TAATGATCCAAGATGGTCCAAACTCAGGCTCCCGGAAAGTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46290CAN33_46290Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46290-T1CAN33_46290-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46290-T1.cdsCAN33_46290-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46290-T1.exon6CAN33_46290-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_46290-T1.exon5CAN33_46290-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_46290-T1.exon4CAN33_46290-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_46290-T1.exon3CAN33_46290-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46290-T1.exon2CAN33_46290-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46290-T1.exon1CAN33_46290-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.5
NoteantiSMASH:Cluster_10000221.6
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2577189..2578396 -
Powered by Drupal