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CAN33_4630-T1, CAN33_4630-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4630-T1
Unique NameCAN33_4630-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:558261..559648-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4630-T1 ID=CAN33_4630-T1|Name=CAN33_4630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1388bp|location=Sequence derived from alignment at NKJJ01000019.1:558261..559648- (Aspergillus niger FDAARGOS_311)
ATGTCGTCCTCACAATCGCCGCAGAACAGCAATGCGGACCCCAGTTCCTC
AGCGAAGCCATTCTCTTTATCATTAGGCGGAAACTCCACGAAAGCACCAG
CAAACGGCCAGCCGAAGAAAACATCCTTCAACATTCAAGGCGCGGCGCGT
TCCACCGACTCACCCAGCCGAACACTCGCGCGCCGACCTCACCACCTGCA
CGATGACGAAGAATCCGATGAAGAAGCCGCGCCCACTCATGAAGCCGTCA
CCGGGTTCGACACCTTAACGGGAACGGCTATTCCCGCCAACAAGGTGGAA
GAAAAGCGCGAGCTGGTCATTCCCGTCGCTGGAAATAATAATTGGAGGGA
CCGTCCGGGCGTCAATCTCCGGAAACCTAAGGGCAAGAACCTCTTGCCAA
AGGAGGTCCAGGCCATTCAGGAAGCTCAGAAACGGGGTGAAGTTGCTGGA
GATAATGTTGAGACAGAGCGTCCGAGTATGGCTTATGGGTTGAGTTTTGC
GCAGCCGGCTTCGCAGGATTCGGCCCAGGCGGCGGATAATGATCGCCCGA
TGAAGGATGTTACTGAGCCTGCTGCTACTCCTGCTGCCGAGGTAGAACGC
AAGCCACTCACGCAGGATGAGATTGCCTTGCAGGCGCTTATTCGAGAGAC
GAAGGGGGAGCCGGAGCGCAGGTCGGATCTTGTTATTGAGTCGGTTAATC
GAGATGACGATGATCGGGCGGGCGGGCGATATGATGAGACGTCTTCGTTT
CGAGCGGATGTTGCGGCGCGCCCGGAGTCTGCGAGCTTGGATCAGTATAA
CGCAATCCCTGTTGAGGAGTTTGGCGCTGCGCTACTTCGTGGTATGGGGT
GGAAGGAGGGTCAAGCTGTAGGAAGAGGAAAATACGGTGGTTCTGCAAAT
CAGGACAATAAGCCGCGGGTCCCGGAGCGTCGTCCTGGGTTCCTGGGGAT
CGGAGCGAAAGATGTGTCTGGGGGGAAGGGTGCAGAGGCCGAACTCGGTG
CATGGGGCAAGGCTGCCATGCGGAAAGGGTCCAGGAAGGGAGGGAAGGAG
GGCGAGTCCAATCCGGAAGGTGTATATATGCCCATCATGATGCGAAACAA
GCAGACCGGCGAGTTCATAACAGAAGAGGAGCTCGCGGCGCAACGGAAAG
AGGCCAAGAAACGGGGCGACGATGACGAATGGAAGCAACGACGAGATCGC
AATTTGGAGAAGAGTGGCCGTGATAGGGATCGTGATCGTGACTCACGGCG
TCGCGACTACGATGACGATGAAACTGATCGCTATGACAGACGGAGGACCG
GATCTTCAAGGAGAGACCGGAGTTTGTCATCCAGTGACCGGCATTCAAGA
CGGCGCAGATACGAAGATGAAGATAGCGACAGTCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:558261..559648-

>CAN33_4630-T1 ID=CAN33_4630-T1|Name=CAN33_4630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3825bp|location=Sequence derived from alignment at NKJJ01000019.1:558261..559648- (Aspergillus niger FDAARGOS_311)
TCGTGAACGGAGGACCGGATCTTCAAGGAGAGACCGGAATGTCGTCCTCA
CAATCGCCGCAGAACAGCAATGCGGACCCCAGTTCCTCAGCGAAGCCATT
CTCTTTATCATTAGGCGGAAACTCCACGAAAGCACCAGCAAACGGCCAGC
CGAAGAAAACATCCTTCAACATTCAAGGCGCGGCGCGTTCCACCGACTCA
CCCAGCCGAACACTCGCGCGCCGACCTCACCACCTGCACGATGACGAAGA
ATCCGATGAAGAAGCCGCGCCCACTCATGAAGCCGTCACCGGGTTCGACA
CCTTAACGGGAACGGCTATTCCCGCCAACAAGGTGGAAGAAAAGCGCGAG
CTGGTCATTCCCGTCGCTGGAAATAATAATTGGAGGGACCGTCCGGGCGT
CAATCTCCGGAAACCTAAGGGCAAGAACCTCTTGCCAAAGGAGGTCCAGG
CCATTCAGGAAGCTCAGAAACGGGGTGAAGTTGCTGGAGATAATGTTGAG
ACAGAGCGTCCGAGTATGGCTTATGGGTTGAGTTTTGCGCAGCCGGCTTC
GCAGGATTCGGCCCAGGCGGCGGATAATGATCGCCCGATGAAGGATGTTA
CTGAGCCTGCTGCTACTCCTGCTGCCGAGGTAGAACGCAAGCCACTCACG
CAGGATGAGATTGCCTTGCAGGCGCTTATTCGAGAGACGAAGGGGGAGCC
GGAGCGCAGGTCGGATCTTGTTATTGAGTCGGTTAATCGAGATGACGATG
ATCGGGCGGGCGGGCGATATGATGAGACGTCTTCGTTTCGAGCGGATGTT
GCGGCGCGCCCGGAGTCTGCGAGCTTGGATCAGTATAACGCAATCCCTGT
TGAGGAGTTTGGCGCTGCGCTACTTCGTGGTATGGGGTGGAAGGAGGGTC
AAGCTGTAGGAAGAGGAAAATACGGTGGTTCTGCAAATCAGGACAATAAG
CCGCGGGTCCCGGAGCGTCGTCCTGGGTTCCTGGGGATCGGAGCGAAAGA
TGTGTCTGGGGGGAAGGGTGCAGAGGCCGAACTCGGTGCATGGGGCAAGG
CTGCCATGCGGAAAGGGTCCAGGAAGGGAGGGAAGGAGGGCGAGTCCAAT
CCGGAAGGTGTATATATGCCCATCATGATGCGAAACAAGCAGACCGGCGA
GTTCATAACAGAAGAGGAGCTCGCGGCGCAACGGAAAGAGGCCAAGAAAC
GGGGCGACGATGACGAATGGAAGCAACGACGAGATCGCAATTTGGAGAAG
AGTGGCCGTGATAGGGATCGTGATCTCGTGAACGGAGGACCGGATCTTCA
AGGAGAGACCGGAATGTCGTCCTCACAATCGCCGCAGAACAGCAATGCGG
ACCCCAGTTCCTCAGCGAAGCCATTCTCTTTATCATTAGGCGGAAACTCC
ACGAAAGCACCAGCAAACGGCCAGCCGAAGAAAACATCCTTCAACATTCA
AGGCGCGGCGCGTTCCACCGACTCACCCAGCCGAACACTCGCGCGCCGAC
CTCACCACCTGCACGATGACGAAGAATCCGATGAAGAAGCCGCGCCCACT
CATGAAGCCGTCACCGGGTTCGACACCTTAACGGGAACGGCTATTCCCGC
CAACAAGGTGGAAGAAAAGCGCGAGCTGGTCATTCCCGTCGCTGGAAATA
ATAATTGGAGGGACCGTCCGGGCGTCAATCTCCGGAAACCTAAGGGCAAG
AACCTCTTGCCAAAGGAGGTCCAGGCCATTCAGGAAGCTCAGAAACGGGG
TGAAGTTGCTGGAGATAATGTTGAGACAGAGCGTCCGAGTATGGCTTATG
GGTTGAGTTTTGCGCAGCCGGCTTCGCAGGATTCGGCCCAGGCGGCGGAT
AATGATCGCCCGATGAAGGATGTTACTGAGCCTGCTGCTACTCCTGCTGC
CGAGGTAGAACGCAAGCCACTCACGCAGGATGAGATTGCCTTGCAGGCGC
TTATTCGAGAGACGAAGGGGGAGCCGGAGCGCAGGTCGGATCTTGTTATT
GAGTCGGTTAATCGAGATGACGATGATCGGGCGGGCGGGCGATATGATGA
GACGTCTTCGTTTCGAGCGGATGTTGCGGCGCGCCCGGAGTCTGCGAGCT
TGGATCAGTATAACGCAATCCCTGTTGAGGAGTTTGGCGCTGCGCTACTT
CGTGGTATGGGGTGGAAGGAGGGTCAAGCTGTAGGAAGAGGAAAATACGG
TGGTTCTGCAAATCAGGACAATAAGCCGCGGGTCCCGGAGCGTCGTCCTG
GGTTCCTGGGGATCGGAGCGAAAGATGTGTCTGGGGGGAAGGGTGCAGAG
GCCGAACTCGGTGCATGGGGCAAGGCTGCCATGCGGAAAGGGTCCAGGAA
GGGAGGGAAGGAGGGCGAGTCCAATCCGGAAGGTGTATATATGCCCATCA
TGATGCGAAACAAGCAGACCGGCGAGTTCATAACAGAAGAGGAGCTCGCG
GCGCAACGGAAAGAGGCCAAGAAACGGGGCGACGATGACGAATGGAAGCA
ACGACGAGATCGCAATTTGGAGAAGAGTGGCCGTGATAGGGATCGTGATC
TCGTGAACGGAGGACCGGATCTTCAAGGAGAGACCGGAATGTCGTCCTCA
CAATCGCCGCAGAACAGCAATGCGGACCCCAGTTCCTCAGCGAAGCCATT
CTCTTTATCATTAGGCGGAAACTCCACGAAAGCACCAGCAAACGGCCAGC
CGAAGAAAACATCCTTCAACATTCAAGGCGCGGCGCGTTCCACCGACTCA
CCCAGCCGAACACTCGCGCGCCGACCTCACCACCTGCACGATGACGAAGA
ATCCGATGAAGAAGCCGCGCCCACTCATGAAGCCGTCACCGGGTTCGACA
CCTTAACGGGAACGGCTATTCCCGCCAACAAGGTGGAAGAAAAGCGCGAG
CTGGTCATTCCCGTCGCTGGAAATAATAATTGGAGGGACCGTCCGGGCGT
CAATCTCCGGAAACCTAAGGGCAAGAACCTCTTGCCAAAGGAGGTCCAGG
CCATTCAGGAAGCTCAGAAACGGGGTGAAGTTGCTGGAGATAATGTTGAG
ACAGAGCGTCCGAGTATGGCTTATGGGTTGAGTTTTGCGCAGCCGGCTTC
GCAGGATTCGGCCCAGGCGGCGGATAATGATCGCCCGATGAAGGATGTTA
CTGAGCCTGCTGCTACTCCTGCTGCCGAGGTAGAACGCAAGCCACTCACG
CAGGATGAGATTGCCTTGCAGGCGCTTATTCGAGAGACGAAGGGGGAGCC
GGAGCGCAGGTCGGATCTTGTTATTGAGTCGGTTAATCGAGATGACGATG
ATCGGGCGGGCGGGCGATATGATGAGACGTCTTCGTTTCGAGCGGATGTT
GCGGCGCGCCCGGAGTCTGCGAGCTTGGATCAGTATAACGCAATCCCTGT
TGAGGAGTTTGGCGCTGCGCTACTTCGTGGTATGGGGTGGAAGGAGGGTC
AAGCTGTAGGAAGAGGAAAATACGGTGGTTCTGCAAATCAGGACAATAAG
CCGCGGGTCCCGGAGCGTCGTCCTGGGTTCCTGGGGATCGGAGCGAAAGA
TGTGTCTGGGGGGAAGGGTGCAGAGGCCGAACTCGGTGCATGGGGCAAGG
CTGCCATGCGGAAAGGGTCCAGGAAGGGAGGGAAGGAGGGCGAGTCCAAT
CCGGAAGGTGTATATATGCCCATCATGATGCGAAACAAGCAGACCGGCGA
GTTCATAACAGAAGAGGAGCTCGCGGCGCAACGGAAAGAGGCCAAGAAAC
GGGGCGACGATGACGAATGGAAGCAACGACGAGATCGCAATTTGGAGAAG
AGTGGCCGTGATAGGGATCGTGATC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPP2CAN33_4630Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4630-T1CAN33_4630-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4630-T1.cdsCAN33_4630-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4630-T1.exon3CAN33_4630-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4630-T1.exon2CAN33_4630-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4630-T1.exon1CAN33_4630-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR000467
DBxrefInterPro:IPR026822
DBxrefPFAM:PF12656
ProductPre-mRNA-splicing factor spp2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:558261..559648 -
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