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CAN33_46340-T1, CAN33_46340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46340-T1
Unique NameCAN33_46340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2609012..2610176-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46340-T1 ID=CAN33_46340-T1|Name=CAN33_46340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1165bp|location=Sequence derived from alignment at NKJJ01000022.1:2609012..2610176- (Aspergillus niger FDAARGOS_311)
ATGCCCAACCGTCTCGGCATCGCCTCCATGTCCCTTGGACGCCCAGGCAT
CCACTCCCTCCCCTGGAAGCTCCACGAAGCCGCCCGCCACGGCTACAGCG
GGATCGAGCTCTTCTTCGACGACCTGGACCACTACGCAACCACCCACTTC
AATGGCAGCCACATCGCGGCTGCTCACGCCGTGCACGCTCTCTGCACGAC
CCTCAACCTCACCATCATCTGCCTGCAACCCTTCTCCTTCTACGAGGGGC
TCGTCGACCGCAAGCAAACCGAGTATCTATTGACCGTGAAGCTGCCCACA
TGGTTCCAGCTCGCTCGCATCCTCGACACCGACATGATCCAGGTGCCCTC
GAACTTCGCGCCCGCCCAGCAAACCACGGGTGACCGGGACGTGATCGTCG
GCGACCTCCAGCGCCTCGCAGACATCGGCCTGGCACAGTCCCCGCCCTTC
CGCTTCGTATACGAAGCACTGGCCTGGGGCACGCGGGTGAACCTGTGGGA
CGAGGCGTACGAGATCGTCGAGGCCGTGGACCGTCCCAACTTCGGTATCT
GTCTTGATACGTTTAACCTTGCGGGTCGGGTGTATGCGCACCCTGGTCGG
CAGGACGGGAAGACGGTCAACGCGGAGGCGGATCTGGCTGCGTCGTTGAA
GAAGTTGCGCGAGACGGTGGATGTCAAGAAGGTGTTCTACGTGCAGGTTG
TGGATGGAGAGAGGCTGGAGAGGCCGTTGGATGAGACCCATCCGTTTCAT
GTGGAGGGGCAGCCGGTGCGGATGAACTGGAGTCGCAATGCGAGGTTGTT
TGCGTTTGAGGAGGATCGCGGCGGGTATTTGCCCATTGAGGAGACCGCGA
GGGCGTTCTTTGATACGGGGTTCGAGGGCTGGGTGTCGTTGGAGTTGTTT
AGTCGCACGTTGGCGGAGAAGGGCACGGGGGTGGTCACGGAGCATGCGAG
ACGCGGGTTGGAGTCGTGGAAGGAGTTGTGTAGGAGGTTGGAGTTTAAGG
GGGCGGAGCCGGGACTGGATTTTGTTCCTGGGGAGGTGAAGGTGCAGTCG
GTTGCTGTGGGGAGTGGGAAGGGGGTGGAACAGGAGGAGATGGGGTTGTG
CAGCATCGGTTGTAGATGTGATGCTATGCTGCTAGTACTGGGCTAGTGCT
GATACTGCTCGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2609012..2610176-

>CAN33_46340-T1 ID=CAN33_46340-T1|Name=CAN33_46340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2232bp|location=Sequence derived from alignment at NKJJ01000022.1:2609012..2610176- (Aspergillus niger FDAARGOS_311)
TGCTGATACTGCTCGGTGAATGCCCAACCGTCTCGGCATCGCCTCCATGT
CCCTTGGACGCCCAGGCATCCACTCCCTCCCCTGGAAGCTCCACGAAGCC
GCCCGCCACGGCTACAGCGGGATCGAGCTCTTCTTCGACGACCTGGACCA
CTACGCAACCACCCACTTCAATGGCAGCCACATCGCGGCTGCTCACGCCG
TGCACGCTCTCTGCACGACCCTCAACCTCACCATCATCTGCCTGCAACCC
TTCTCCTTCTACGAGGGGCTCGTCGACCGCAAGCAAACCGAGTATCTATT
GACCGTGAAGCTGCCCACATGGTTCCAGCTCGCTCGCATCCTCGACACCG
ACATGATCCAGGTGCCCTCGAACTTCGCGCCCGCCCAGCAAACCACGGGT
GACCGGGACGTGATCGTCGGCGACCTCCAGCGCCTCGCAGACATCGGCCT
GGCACAGTCCCCGCCCTTCCGCTTCGTATACGAAGCACTGGCCTGGGGCA
CGCGGGTGAACCTGTGGGACGAGGCGTACGAGATCGTCGAGGCCGTGGAC
CGTCCCAACTTCGGTATCTGTCTTGATACGTTTAACCTTGCGGGTCGGGT
GTATGCGCACCCTGGTCGGCAGGACGGGAAGACGGTCAACGCGGAGGCGG
ATCTGGCTGCGTCGTTGAAGAAGTTGCGCGAGACGGTGGATGTCAAGAAG
GTGTTCTACGTGCAGGTTGTGGATGGAGAGAGGCTGGAGAGGCCGTTGGA
TGAGACCCATCCGTTTCATGTGGAGGGGCAGCCGGTGCGGATGAACTGGA
GTCGCAATGCGAGGTTGTTTGCGTTTGAGGAGGATCGCGGCGGGTATTTG
CCCATTGAGGAGACCGCGAGGGCGTTCTTTGATACGGGGTTCGAGGGCTG
GGTGTCGTTGGAGTTGTTTAGTCGCACGTTGGCGGAGAAGGGCACGGGGG
TGGTCACGGAGCATGCGAGACGCGGGTTGGAGTCGTGGAAGGAGTTGTGT
AGGAGGTTGGAGTTTAAGGGGGCGGAGCCGGGACTGGATTTTGTTCCTGG
GGAGGTGAAGGTGCAGTCGGTTGCTGTGGGGAGTGGGAAGGGGGTGGAAC
AGGAGGAGATGGGGTTTGCTGATACTGCTCGGTGAATGCCCAACCGTCTC
GGCATCGCCTCCATGTCCCTTGGACGCCCAGGCATCCACTCCCTCCCCTG
GAAGCTCCACGAAGCCGCCCGCCACGGCTACAGCGGGATCGAGCTCTTCT
TCGACGACCTGGACCACTACGCAACCACCCACTTCAATGGCAGCCACATC
GCGGCTGCTCACGCCGTGCACGCTCTCTGCACGACCCTCAACCTCACCAT
CATCTGCCTGCAACCCTTCTCCTTCTACGAGGGGCTCGTCGACCGCAAGC
AAACCGAGTATCTATTGACCGTGAAGCTGCCCACATGGTTCCAGCTCGCT
CGCATCCTCGACACCGACATGATCCAGGTGCCCTCGAACTTCGCGCCCGC
CCAGCAAACCACGGGTGACCGGGACGTGATCGTCGGCGACCTCCAGCGCC
TCGCAGACATCGGCCTGGCACAGTCCCCGCCCTTCCGCTTCGTATACGAA
GCACTGGCCTGGGGCACGCGGGTGAACCTGTGGGACGAGGCGTACGAGAT
CGTCGAGGCCGTGGACCGTCCCAACTTCGGTATCTGTCTTGATACGTTTA
ACCTTGCGGGTCGGGTGTATGCGCACCCTGGTCGGCAGGACGGGAAGACG
GTCAACGCGGAGGCGGATCTGGCTGCGTCGTTGAAGAAGTTGCGCGAGAC
GGTGGATGTCAAGAAGGTGTTCTACGTGCAGGTTGTGGATGGAGAGAGGC
TGGAGAGGCCGTTGGATGAGACCCATCCGTTTCATGTGGAGGGGCAGCCG
GTGCGGATGAACTGGAGTCGCAATGCGAGGTTGTTTGCGTTTGAGGAGGA
TCGCGGCGGGTATTTGCCCATTGAGGAGACCGCGAGGGCGTTCTTTGATA
CGGGGTTCGAGGGCTGGGTGTCGTTGGAGTTGTTTAGTCGCACGTTGGCG
GAGAAGGGCACGGGGGTGGTCACGGAGCATGCGAGACGCGGGTTGGAGTC
GTGGAAGGAGTTGTGTAGGAGGTTGGAGTTTAAGGGGGCGGAGCCGGGAC
TGGATTTTGTTCCTGGGGAGGTGAAGGTGCAGTCGGTTGCTGTGGGGAGT
GGGAAGGGGGTGGAACAGGAGGAGATGGGGTT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46340CAN33_46340Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46340-T1CAN33_46340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46340-T1.cdsCAN33_46340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46340-T1.exon2CAN33_46340-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46340-T1.exon1CAN33_46340-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.5
NoteantiSMASH:Cluster_10000221.6
DBxrefInterPro:IPR036237
DBxrefInterPro:IPR013022
DBxrefPFAM:PF01261
ProductXylose isomerase-like TIM barrel family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2609012..2610176 -
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