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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2628686..2629573+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46375-T1 ID=CAN33_46375-T1|Name=CAN33_46375-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=888bp|location=Sequence derived from alignment at NKJJ01000022.1:2628686..2629573+ (Aspergillus niger FDAARGOS_311)
ATGTCTAAGATCACAGTCGGTACGTTGCCTCTTTTCCCCAACAATGGAAA
CAATAGGTGTATGTGTATGAAAGAGAGATGCTAATTAATGAACAGCCGGA
GTGCGCCAGAACATCGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAA
GAGAAACTTCCTCGAGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACG
ACCCCCAGCGTGACAAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTT
CCCCGTCCCAACATGACCATCTGGTATGATACCACCCCCACCGGAATCCT
CCCACGGAATAAAGAGAGACAAGGGAACAGAAGTACTAATAAGAGGATAG
TGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTG
ACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTC
ATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCT
CATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGGTAAGC
ACCACATTCCCCATAATATCCCCAGTCGTGATGAAATACTAAATACTCGA
TTAGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAA
CAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTC
TCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTC
GTCGCCAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAA
GGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCC
TAAGCGTCTGTACTAAGCGGGTCGCTTTCTTTTTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2628686..2629573+ >CAN33_46375-T1 ID=CAN33_46375-T1|Name=CAN33_46375-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2700bp|location=Sequence derived from alignment at NKJJ01000022.1:2628686..2629573+ (Aspergillus niger FDAARGOS_311)
ATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAGCAGCTGCT
CAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGACCGTCGAGC
TTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGCGTTTCTCT
GGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACCATCTGTGT
TCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTGACG
CCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTCATC
AAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCTCAT
CAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGTAAAT
TCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAACGAG
GTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCGGTGT
TGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAACACCA
TGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCAGAAC
GTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCTAAGCGTCTGTAC
TAAGCGGGTCGCTTTCTTTTTTTAAATGTCTAAGATCACAGTCGCCGGAG
TGCGCCAGAACATCGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAAG
AGAAACTTCCTCGAGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACGA
CCCCCAGCGTGACAAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTTC
CCCGTCCCAACATGACCATCTGTGTTCTTGGTGACCAGCACGATCTCGAC
CGTGCCAAGCACCACGGCATTGACGCCATGTCCGCCGATGACCTGAAGAA
GCTGAACAAGAACAAGAAGCTCATCAAGAAGCTTGCTCGCAAGTACGATG
CTTTCCTTGCTTCCGACACCCTCATCAAGCAGATCCCCCGTCTCTTGGGT
CCTGGTCTTTCCAAGGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGA
GGACATGGCCAACAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGC
TTAAGAAGGTTCTCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACT
GAGGACGAGCTCGTCGCCAACACCATGCTGGCCATCAACTACCTTGTCTC
TCTGCTTAAGAAGGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTA
CCATGTCTCCCCTAAGCGTCTGTACTAAGCGGGTCGCTTTCTTTTTTTAA
ATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAGCAGCTGCT
CAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGACCGTCGAGC
TTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGCGTTTCTCT
GGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACCATCTGTGT
TCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTGACG
CCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTCATC
AAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCTCAT
CAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGTAAAT
TCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAACGAG
GTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCGGTGT
TGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAACACCA
TGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCAGAAC
GTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCTAAGCGTCTGTAC
TAAGCGGGTCGCTTTCTTTTTTTAAATGTCTAAGATCACAGTCGCCGGAG
TGCGCCAGAACATCGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAAG
AGAAACTTCCTCGAGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACGA
CCCCCAGCGTGACAAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTTC
CCCGTCCCAACATGACCATCTGTGTTCTTGGTGACCAGCACGATCTCGAC
CGTGCCAAGCACCACGGCATTGACGCCATGTCCGCCGATGACCTGAAGAA
GCTGAACAAGAACAAGAAGCTCATCAAGAAGCTTGCTCGCAAGTACGATG
CTTTCCTTGCTTCCGACACCCTCATCAAGCAGATCCCCCGTCTCTTGGGT
CCTGGTCTTTCCAAGGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGA
GGACATGGCCAACAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGC
TTAAGAAGGTTCTCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACT
GAGGACGAGCTCGTCGCCAACACCATGCTGGCCATCAACTACCTTGTCTC
TCTGCTTAAGAAGGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTA
CCATGTCTCCCCTAAGCGTCTGTACTAAGCGGGTCGCTTTCTTTTTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015934 | large ribosomal subunit |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09264LBC |
| DBxref | InterPro:IPR023674 |
| DBxref | InterPro:IPR023673 |
| DBxref | InterPro:IPR016095 |
| DBxref | InterPro:IPR028364 |
| DBxref | InterPro:IPR002143 |
| DBxref | PFAM:PF00687 |
| Product | 60S ribosomal protein L10a |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2628686..2629573 + |
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