You are here

Home

CAN33_46385-T1, CAN33_46385-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46385-T1
Unique NameCAN33_46385-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2631542..2632921+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46385-T1 ID=CAN33_46385-T1|Name=CAN33_46385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1380bp|location=Sequence derived from alignment at NKJJ01000022.1:2631542..2632921+ (Aspergillus niger FDAARGOS_311)
ATGGGAGGTCCTCCCCCGCCTCCTCCCCCTGCGGGCAATCTGCCCAGCAG
ACCCTCTGGTTCAGCAGCGAAGGGTCGGGTAAGAAGCTCTTGTCTGCCAG
TCTAGGCAAGTAGTCGACTGCTAATGCCTTGTATAGGGCGCACTGCTTTC
CGACATCCACAAAGGCGCAAAGTTGAAGAAGACCGTGACCAACGACAGAT
CGGCACCCATGGTCTCAGGAGGAGGCGCGAAGTCTTCCGGTCCTGCAATT
CCAAGCGCTCCGCCAGTTCCGGGCATGGCGAAGCCTCCGACAGGGCTCGC
ACCACCCGTCCCTCCGGCACAGGCAGCGAACAGACTACGAAGCAACAGCG
ATACTGGTTCAGGAGGTGATGTAGTGGCGGGCGCCCCGGCGGCGCCTCAA
CTTGGAGGCCTCTTTGCTGGAGGCATGCCCAAGTTGCGTAGTCGGGGAGG
CGTTGACACCGGAGCTAATCGCGACTCCCCATATCGATCAGATACGGATG
GTTCGCGGAGCGCTCCCCCGCCCCCTGCTATGTCCGCTCCCAAACCGCCA
GGTGCTCGCCCTCCGCCACGCCCCCCTGCGACAGAGTCGCCCCCTACTCC
TCCAGTGAACCCGTTGGTTGCGAACCTGCGGAAACCACCCCCACGACCGG
CCTCCAGGCCGTCATCGACGGTTTCGACTGCGTCCAGCAGATCCGCCCCT
GACGCTCCCCCACGCGCACCGCCACCATTGCCCGGCTCCGCCAAAGGCCC
GCCGCCTCCTCCAGTATCTACAAGAAAACCCTCTGCTCCTGCTCCTCCTC
CACCTCCACCCCCATCAGCTAGCCCAGCTGCACCTCCGCCACCACCCCCG
CCGGCTTCTGCTCCCCGACCTCCCCCGGCGCCATCACGCTCTACACCTCC
TCCCCCTCCCCCTCCTGGCGCCTCTGCTCCACAGCCGCCGAACGGAACAG
CTGCTGCGTCCATCGCCGTACAAGCTGCCAGAAATGCTTTGGGTCACGCG
CCGCCACCTCCCCACCAGCGGCTTCGGCCCCAGCAGCACCTCCTCCACCT
CCTCCCAGTGCTCCCCCCGTCGCCCCTCCTAGCGAACCACTGTCGCGGCC
CTCACCTCTGCCGTCTGCCATAGCACCCCCTCCACCTCATCAACCAGACC
GTTCTACCCTGGACCCGAGCGCCTATACCCTCAGCAACGGCGGGCCGTCA
CCGGGAACAAGCCCTCGCAGTCCAGGCGGACATGGCATCATGCGGGTGGA
TGATCACCGGTTTAAGTTCCAGAGCGAAGGCTTGTTGCCCAAGCCCCGAC
CATTTGTGGGAGGCACCAGGCGGTATCGGGCTGGGCGAGGCAGCAGTGTG
CCATTGGACCTGAGCGCATTGGTTGGATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2631542..2632921+

>CAN33_46385-T1 ID=CAN33_46385-T1|Name=CAN33_46385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3798bp|location=Sequence derived from alignment at NKJJ01000022.1:2631542..2632921+ (Aspergillus niger FDAARGOS_311)
ATGGGAGGTCCTCCCCCGCCTCCTCCCCCTGCGGGCAATCTGCCCAGCAG
ACCCTCTGGTTCAGCAGCGAAGGGTCGGGGCGCACTGCTTTCCGACATCC
ACAAAGGCGCAAAGTTGAAGAAGACCGTGACCAACGACAGATCGGCACCC
ATGGTCTCAGGAGGAGGCGCGAAGTCTTCCGGTCCTGCAATTCCAAGCGC
TCCGCCAGTTCCGGGCATGGCGAAGCCTCCGACAGGGCTCGCACCACCCG
TCCCTCCGGCACAGGCAGCGAACAGACTACGAAGCAACAGCGATACTGGT
TCAGGAGGTGATGTAGTGGCGGGCGCCCCGGCGGCGCCTCAACTTGGAGG
CCTCTTTGCTGGAGGCATGCCCAAGTTGCGTAGTCGGGGAGGCGTTGACA
CCGGAGCTAATCGCGACTCCCCATATCGATCAGATACGGATGGTTCGCGG
AGCGCTCCCCCGCCCCCTGCTATGTCCGCTCCCAAACCGCCAGGTGCTCG
CCCTCCGCCACGCCCCCCTGCGACAGAGTCGCCCCCTACTCCTCCAGTGA
ACCCGTTGGTTGCGAACCTGCGGAAACCACCCCCACGACCGGCCTCCAGG
CCGTCATCGACGGTTTCGACTGCGTCCAGCAGATCCGCCCCTGACGCTCC
CCCACGCGCACCGCCACCATTGCCCGGCTCCGCCAAAGGCCCGCCGCCTC
CTCCAGTATCTACAAGAAAACCCTCTGCTCCTGCTCCTCCTCCACCTCCA
CCCCCATCAGCTAGCCCAGCTGCACCTCCGCCACCACCCCCGCCGGCTTC
TGCTCCCCGACCTCCCCCGGCGCCATCACGCTCTACACCTCCTCCCCCTC
CCCCTCCTGGCGCCTCTGCTCCACAGCCGCCGAACGGAACAGCTGCTGCG
TCCATCGCCGTACAAGCTGCCAGAAATGCTTTGGGTCACGCGCCGCCACC
TCCCCACCAGCGGCTTCGGCCCCAGCAGCACCTCCTCCACCTCCTCCCAG
TGCTCCCCCCGTCGCCCCTCCTAGCGAACCACTACCGTTCTACCCTGGAC
CCGAGCGCCTATACCCTCAGCAACGGCGGGCCGTCACCGGGAACAAGCCC
TCGCAGTCCAGGCGGACATGGCATCATGCGGGTGGATGATCACCGGTTTA
AGTTCCAGAGCGAAGGCTTGTTGCCCAAGCCCCGACCATTTGTGGGAGGC
ACCAGGCGGTATCGGGCTGGGCGAGGCAGCAGTGTGCCATTGGACCTGAG
CGCATTGGTTGGATAAATGGGAGGTCCTCCCCCGCCTCCTCCCCCTGCGG
GCAATCTGCCCAGCAGACCCTCTGGTTCAGCAGCGAAGGGTCGGGGCGCA
CTGCTTTCCGACATCCACAAAGGCGCAAAGTTGAAGAAGACCGTGACCAA
CGACAGATCGGCACCCATGGTCTCAGGAGGAGGCGCGAAGTCTTCCGGTC
CTGCAATTCCAAGCGCTCCGCCAGTTCCGGGCATGGCGAAGCCTCCGACA
GGGCTCGCACCACCCGTCCCTCCGGCACAGGCAGCGAACAGACTACGAAG
CAACAGCGATACTGGTTCAGGAGGTGATGTAGTGGCGGGCGCCCCGGCGG
CGCCTCAACTTGGAGGCCTCTTTGCTGGAGGCATGCCCAAGTTGCGTAGT
CGGGGAGGCGTTGACACCGGAGCTAATCGCGACTCCCCATATCGATCAGA
TACGGATGGTTCGCGGAGCGCTCCCCCGCCCCCTGCTATGTCCGCTCCCA
AACCGCCAGGTGCTCGCCCTCCGCCACGCCCCCCTGCGACAGAGTCGCCC
CCTACTCCTCCAGTGAACCCGTTGGTTGCGAACCTGCGGAAACCACCCCC
ACGACCGGCCTCCAGGCCGTCATCGACGGTTTCGACTGCGTCCAGCAGAT
CCGCCCCTGACGCTCCCCCACGCGCACCGCCACCATTGCCCGGCTCCGCC
AAAGGCCCGCCGCCTCCTCCAGTATCTACAAGAAAACCCTCTGCTCCTGC
TCCTCCTCCACCTCCACCCCCATCAGCTAGCCCAGCTGCACCTCCGCCAC
CACCCCCGCCGGCTTCTGCTCCCCGACCTCCCCCGGCGCCATCACGCTCT
ACACCTCCTCCCCCTCCCCCTCCTGGCGCCTCTGCTCCACAGCCGCCGAA
CGGAACAGCTGCTGCGTCCATCGCCGTACAAGCTGCCAGAAATGCTTTGG
GTCACGCGCCGCCACCTCCCCACCAGCGGCTTCGGCCCCAGCAGCACCTC
CTCCACCTCCTCCCAGTGCTCCCCCCGTCGCCCCTCCTAGCGAACCACTA
CCGTTCTACCCTGGACCCGAGCGCCTATACCCTCAGCAACGGCGGGCCGT
CACCGGGAACAAGCCCTCGCAGTCCAGGCGGACATGGCATCATGCGGGTG
GATGATCACCGGTTTAAGTTCCAGAGCGAAGGCTTGTTGCCCAAGCCCCG
ACCATTTGTGGGAGGCACCAGGCGGTATCGGGCTGGGCGAGGCAGCAGTG
TGCCATTGGACCTGAGCGCATTGGTTGGATAAATGGGAGGTCCTCCCCCG
CCTCCTCCCCCTGCGGGCAATCTGCCCAGCAGACCCTCTGGTTCAGCAGC
GAAGGGTCGGGGCGCACTGCTTTCCGACATCCACAAAGGCGCAAAGTTGA
AGAAGACCGTGACCAACGACAGATCGGCACCCATGGTCTCAGGAGGAGGC
GCGAAGTCTTCCGGTCCTGCAATTCCAAGCGCTCCGCCAGTTCCGGGCAT
GGCGAAGCCTCCGACAGGGCTCGCACCACCCGTCCCTCCGGCACAGGCAG
CGAACAGACTACGAAGCAACAGCGATACTGGTTCAGGAGGTGATGTAGTG
GCGGGCGCCCCGGCGGCGCCTCAACTTGGAGGCCTCTTTGCTGGAGGCAT
GCCCAAGTTGCGTAGTCGGGGAGGCGTTGACACCGGAGCTAATCGCGACT
CCCCATATCGATCAGATACGGATGGTTCGCGGAGCGCTCCCCCGCCCCCT
GCTATGTCCGCTCCCAAACCGCCAGGTGCTCGCCCTCCGCCACGCCCCCC
TGCGACAGAGTCGCCCCCTACTCCTCCAGTGAACCCGTTGGTTGCGAACC
TGCGGAAACCACCCCCACGACCGGCCTCCAGGCCGTCATCGACGGTTTCG
ACTGCGTCCAGCAGATCCGCCCCTGACGCTCCCCCACGCGCACCGCCACC
ATTGCCCGGCTCCGCCAAAGGCCCGCCGCCTCCTCCAGTATCTACAAGAA
AACCCTCTGCTCCTGCTCCTCCTCCACCTCCACCCCCATCAGCTAGCCCA
GCTGCACCTCCGCCACCACCCCCGCCGGCTTCTGCTCCCCGACCTCCCCC
GGCGCCATCACGCTCTACACCTCCTCCCCCTCCCCCTCCTGGCGCCTCTG
CTCCACAGCCGCCGAACGGAACAGCTGCTGCGTCCATCGCCGTACAAGCT
GCCAGAAATGCTTTGGGTCACGCGCCGCCACCTCCCCACCAGCGGCTTCG
GCCCCAGCAGCACCTCCTCCACCTCCTCCCAGTGCTCCCCCCGTCGCCCC
TCCTAGCGAACCACTACCGTTCTACCCTGGACCCGAGCGCCTATACCCTC
AGCAACGGCGGGCCGTCACCGGGAACAAGCCCTCGCAGTCCAGGCGGACA
TGGCATCATGCGGGTGGATGATCACCGGTTTAAGTTCCAGAGCGAAGGCT
TGTTGCCCAAGCCCCGACCATTTGTGGGAGGCACCAGGCGGTATCGGGCT
GGGCGAGGCAGCAGTGTGCCATTGGACCTGAGCGCATTGGTTGGATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46385CAN33_46385Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46385-T1.exon1CAN33_46385-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46385-T1.exon2CAN33_46385-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46385-T1.exon3CAN33_46385-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46385-T1.cdsCAN33_46385-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46385-T1CAN33_46385-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR003124
DBxrefPFAM:PF02205
ProductWH2 motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2631542..2632921 +
Powered by Drupal