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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2639216..2640486- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46400-T1 ID=CAN33_46400-T1|Name=CAN33_46400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1271bp|location=Sequence derived from alignment at NKJJ01000022.1:2639216..2640486- (Aspergillus niger FDAARGOS_311)
ATGGCACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCC
CTTTGGGGGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGTCCCCTGG
ATGCTGTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATG
TCCGACCCTGTCAAGCCGTATGTGAGCCCTCAGACACTTCTGACTCTCAT
TACTCTGGTTCAGCCTCCGTGCTGAAGAGGCGCCTTCGATTGCTCGCATG
CGGGAAAAGGACTTGTCACTGACACCGTGGCTTCTTCGCTGTTCAGGTAT
CTGCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAG
TCTACGCATGATTACCCAATGGAACGATCAGCTCCTGTACCTTCGTGATT
ACCGGAAGAGTAAGCATGGCTTTGGTCCCGTCCCTCCTATATCCGGTCTC
ACCCGCCGTGGGGCCGGATCGCAGATCGACTCTAACTTGGGCTTCGTCGC
ATAACAGTTCCCTGGGGAATCACGCATACCTTCCTTATCGTCAACATGAT
CGCAATGGCGGCCTGCTCGTTCATGGTCATTGCTCGTAGACACACGGAGT
ACGCCGTTGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTAC
GGATTGATCTTCGACCTCAACTTCTTCCTCCGCAACCTGAGTGTTGTCGG
TGGCTTGCTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCC
CCGCCGGTCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACGTCCAG
TTCGCTGGTCGTGTGCTGCTGATCTTCCTCTTCATCGGATTCGTCTTCTC
TGGCCAGTGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCG
CGTGTGTCATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGATCATG
CTGGTCGTGTTGTTGAGTGTGTTCAACGTCCTGGTCAACAACTTCTGGAC
CGTACGTCTGCCCCATGACAGGAAACTTTGTGCTGCGCAATAACTGACAT
TACCTTAGCTTCACCCCCACCACCCTCACAAGGACTTCGCCAAGTACGAC
TTCTTCCAGATCCTGTCCATTGTGTAAGCAGCCCTGAAGTTCACCATATC
CCCAAGAATTGCAAATCACCTCTAGCTAACAATATACGCTCACTACAGCG
GAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGAC
GAGAAGAAGAAGGTCTACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2639216..2640486- >CAN33_46400-T1 ID=CAN33_46400-T1|Name=CAN33_46400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4560bp|location=Sequence derived from alignment at NKJJ01000022.1:2639216..2640486- (Aspergillus niger FDAARGOS_311)
CGGAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGG
ACGAGAAGAAGAAGGTCTACTAACTTCACCCCCACCACCCTCACAAGGAC
TTCGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGTTTCCCTGGGGAA
TCACGCATACCTTCCTTATCGTCAACATGATCGCAATGGCGGCCTGCTCG
TTCATGGTCATTGCTCGTAGACACACGGAGTACGCCGTTGGCGGTCTCTT
GGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCA
ACTTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTC
TCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCAGCT
CGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGC
TGATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTCTGG
CGCATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGTCATGGTCATTGT
TGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTG
TGTTCAACGTCCTGGTCAACAACTTCTGGACCGTATCTGCCAGCCATTGG
TCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTACGCATGATTA
CCCAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGAATGGC
ACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTG
GGGGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCT
GTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATGTCCGA
CCCTGTCAAGCCCGGAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCC
AATTGAGTATGGACGAGAAGAAGAAGGTCTACTAACTTCACCCCCACCAC
CCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGT
TTCCCTGGGGAATCACGCATACCTTCCTTATCGTCAACATGATCGCAATG
GCGGCCTGCTCGTTCATGGTCATTGCTCGTAGACACACGGAGTACGCCGT
TGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGA
TCTTCGACCTCAACTTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTG
CTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGG
TCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTG
GTCGTGTGCTGCTGATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAG
TGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGT
CATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCG
TGTTGTTGAGTGTGTTCAACGTCCTGGTCAACAACTTCTGGACCGTATCT
GCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTC
TACGCATGATTACCCAATGGAACGATCAGCTCCTGTACCTTCGTGATTAC
CGGAAGAATGGCACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACC
AGAACCCCTTTGGGGGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGT
CCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGA
CACCATGTCCGACCCTGTCAAGCCCGGAGGTCTTCTCCTCCTGGTCAACA
TGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAGAAGGTCTACTAACTT
CACCCCCACCACCCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAGAT
CCTGTCCATTGTTTCCCTGGGGAATCACGCATACCTTCCTTATCGTCAAC
ATGATCGCAATGGCGGCCTGCTCGTTCATGGTCATTGCTCGTAGACACAC
GGAGTACGCCGTTGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCG
GTTACGGATTGATCTTCGACCTCAACTTCTTCCTCCGCAACCTGAGTGTT
GTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTT
CGTCCCCGCCGGTCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACG
TCCAGTTCGCTGGTCGTGTGCTGCTGATCTTCCTCTTCATCGGATTCGTC
TTCTCTGGCCAGTGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTT
CGTCGCGTGTGTCATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGA
TCATGCTGGTCGTGTTGTTGAGTGTGTTCAACGTCCTGGTCAACAACTTC
TGGACCGTATCTGCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCA
TTGAGGACAGTCTACGCATGATTACCCAATGGAACGATCAGCTCCTGTAC
CTTCGTGATTACCGGAAGAATGGCACAAATCCGTGGCACTGCAGGCTACA
ATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGTGTAGAGGCTACG
AGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGA
GGACTGGCTGGACACCATGTCCGACCCTGTCAAGCCCGGAGGTCTTCTCC
TCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAGAAG
GTCTACTAACTTCACCCCCACCACCCTCACAAGGACTTCGCCAAGTACGA
CTTCTTCCAGATCCTGTCCATTGTTTCCCTGGGGAATCACGCATACCTTC
CTTATCGTCAACATGATCGCAATGGCGGCCTGCTCGTTCATGGTCATTGC
TCGTAGACACACGGAGTACGCCGTTGGCGGTCTCTTGGCTGTCGTCATCG
TTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAACTTCTTCCTCCGC
AACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGT
GCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCAGCTCGATGAGAAGGACC
GCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTGATCTTCCTCTTC
ATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTCTGGCGCATTATTGTCAG
CCTGTTCGGCTTCGTCGCGTGTGTCATGGTCATTGTTGGATTCAAGGCCA
AGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTGTTCAACGTCCTG
GTCAACAACTTCTGGACCGTATCTGCCAGCCATTGGTCGCTTTCTGATCG
TTGTCACCTTCATTGAGGACAGTCTACGCATGATTACCCAATGGAACGAT
CAGCTCCTGTACCTTCGTGATTACCGGAAGAATGGCACAAATCCGTGGCA
CTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGT
GTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGAC
GAGCAAAATTGAGGACTGGCTGGACACCATGTCCGACCCTGTCAAGCCCG
GAGGTCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGAC
GAGAAGAAGAAGGTCTACTAACTTCACCCCCACCACCCTCACAAGGACTT
CGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGTTTCCCTGGGGAATC
ACGCATACCTTCCTTATCGTCAACATGATCGCAATGGCGGCCTGCTCGTT
CATGGTCATTGCTCGTAGACACACGGAGTACGCCGTTGGCGGTCTCTTGG
CTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAAC
TTCTTCCTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTC
TGACTCGTGGGTGCGCAAGAAGTTCGTCCCCGCCGGTCTTCCCCAGCTCG
ATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTG
ATCTTCCTCTTCATCGGATTCGTCTTCTCTGGCCAGTGGAGTCTCTGGCG
CATTATTGTCAGCCTGTTCGGCTTCGTCGCGTGTGTCATGGTCATTGTTG
GATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTG
TTCAACGTCCTGGTCAACAACTTCTGGACCGTATCTGCCAGCCATTGGTC
GCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTACGCATGATTACC
CAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGAATGGCAC
AAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGG
GGTCCTGGTCGTGTAGAGGCTACGAGCGATCCGAGTCCCCTGGATGCTGT
TCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATGTCCGACC
CTGTCAAGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002995 |
| DBxref | PFAM:PF02077 |
| Product | SURF4 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2639216..2640486 - |
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