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CAN33_46415-T1, CAN33_46415-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46415-T1
Unique NameCAN33_46415-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2650192..2651425+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46415-T1 ID=CAN33_46415-T1|Name=CAN33_46415-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1234bp|location=Sequence derived from alignment at NKJJ01000022.1:2650192..2651425+ (Aspergillus niger FDAARGOS_311)
ATGTCACGCTCTCGTCTGCCACCGACCCCTGCCATGTCGGGCGAGTTCAT
AGTCAAAGACAATGCATCGGTGGATGCGTCGGATCCATTTGCACTGCCTC
CAGCGGCCATTAGTCCATCCAAGATGCAAGCTGCTAGCAGGAGACCATCC
AAAACTGATCCATCCGCTTCCTTCCCAGCATCTCCAGCATCGCCGGATCT
CGCACTGGGTATCATGGCGAATTCCCCGCGTCAGACTGGTGTCAAGAGAC
CTCTCGAAGACTTTAACCTTCCACCGCCCCCCACACGCACTCGCAAAATC
ATTCAGATGAAGCCCAAGACCCAAAGCCCACCAAAGCCGACCGCACCAGC
CAGCAAAGCCTCTGCAAAAGATAATGGCAAGACACCAGCAAACAATGGAG
CCTCAGCCAACTCCAAGAAGAAACAACCCAGCGCAACTAGTGCAGCGGGC
CGAAAAATTGCTAGGAAAACAGCTCACAGCCTGATCGAACGGCGGCGGAG
ATCTAAAATGAATGAAGAATTTGGAACTCTGAAAGACATGATCCCGGCGT
GCAAAGGACAGGACATGCATAAGCTCGCCATTTTACAGGTTTGTCCCGAC
TTCAATCTTCGACGACCCCTGTCCTTGAGCCGGTCGCTAACCGTTCCCGA
TGGCCTAGGCAAGCATTGATTACGTCAATTACCTAGAACAATGTATACTC
GATCTGAAAACTGCCGGTAATCGACACGCAATGGCCTCGCCGCGAATGCC
TCCCGCTCCTCCTTCACCAACATCTCCGGAGGCTCTGGCAGAAGAATCGG
GCCTGTCCTCGGCTTCCGTGTCTCCGGAACTACCTCCAACTGATGCTGCG
GCGGATGCAATCTCCCCGGCGTTCTCTCCCCGAAGTGGTGGTCCTATCGG
GACGGCGCCCGATTTTGCGTCCTCCATCACGCCAAGCCCGGCACTGGGTC
CAACCCACCCATCCGACAATCCGTCGCGTTCTGAGCGTAGCTCATGGGCT
GTGTCTTCTTCCAGCACCTCCCCAGTAATGCAATCTCGGTATTCCATCGC
ATCTTCTGCCGATGTGGACCACGAAGCATCCGCAGCCCTACTAATGCTGA
ACCGGGACTGCCGGGGCTCTGTCGGCTCGGTCCACGACGTGCCCACCAAT
TCCCTCACCCGGCATGGGAATCCCCACACCCAGGACCCACAAAGGAAGAT
CGGGATGAGCGTTAAAGACTTGCTTATTTCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2650192..2651425+

>CAN33_46415-T1 ID=CAN33_46415-T1|Name=CAN33_46415-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2328bp|location=Sequence derived from alignment at NKJJ01000022.1:2650192..2651425+ (Aspergillus niger FDAARGOS_311)
ATGTCACGCTCTCGTCTGCCACCGACCCCTGCCATGTCGGGCGAGTTCAT
AGTCAAAGACAATGCATCGGTGGATGCGTCGGATCCATTTGCACTGCCTC
CAGCGGCCATTAGTCCATCCAAGATGCAAGCTGCTAGCAGGAGACCATCC
AAAACTGATCCATCCGCTTCCTTCCCAGCATCTCCAGCATCGCCGGATCT
CGCACTGGGTATCATGGCGAATTCCCCGCGTCAGACTGGTGTCAAGAGAC
CTCTCGAAGACTTTAACCTTCCACCGCCCCCCACACGCACTCGCAAAATC
ATTCAGATGAAGCCCAAGACCCAAAGCCCACCAAAGCCGACCGCACCAGC
CAGCAAAGCCTCTGCAAAAGATAATGGCAAGACACCAGCAAACAATGGAG
CCTCAGCCAACTCCAAGAAGAAACAACCCAGCGCAACTAGTGCAGCGGGC
CGAAAAATTGCTAGGAAAACAGCTCACAGCCTGATCGAACGGCGGCGGAG
ATCTAAAATGAATGAAGAATTTGGAACTCTGAAAGACATGATCCCGGCGT
GCAAAGGACAGGACATGCATAAGCTCGCCATTTTACAGGCAAGCATTGAT
TACGTCAATTACCTAGAACAATGTATACTCGATCTGAAAACTGCCGGTAA
TCGACACGCAATGGCCTCGCCGCGAATGCCTCCCGCTCCTCCTTCACCAA
CATCTCCGGAGGCTCTGGCAGAAGAATCGGGCCTGTCCTCGGCTTCCGTG
TCTCCGGAACTACCTCCAACTGATGCTGCGGCGGATGCAATCTCCCCGGC
GTTCTCTCCCCGAAGTGGTGGTCCTATCGGGACGGCGCCCGATTTTGCGT
CCTCCATCACGCCAAGCCCGGCACTGGGTCCAACCCACCCATCCGACAAT
CCGTCGCGTTCTGAGCGTAGCTCATGGGCTGTGTCTTCTTCCAGCACCTC
CCCAGTAATGCAATCTCGGTATTCCATCGCATCTTCTGCCGATGTGGACC
ACGAAGCATCCGCAGCCCTACTAATGCTGAACCGGGACTGCCGGGGCTCT
GTCGGCTCGGTCCACGACGTGCCCACCAATTCCCTCACCCGGCATGGGAA
TCCCCACACCCAGGACCCACAAAGGAAGATCGGGATGAGCGTTAAAGACT
TGCTTATTTCCTAAATGTCACGCTCTCGTCTGCCACCGACCCCTGCCATG
TCGGGCGAGTTCATAGTCAAAGACAATGCATCGGTGGATGCGTCGGATCC
ATTTGCACTGCCTCCAGCGGCCATTAGTCCATCCAAGATGCAAGCTGCTA
GCAGGAGACCATCCAAAACTGATCCATCCGCTTCCTTCCCAGCATCTCCA
GCATCGCCGGATCTCGCACTGGGTATCATGGCGAATTCCCCGCGTCAGAC
TGGTGTCAAGAGACCTCTCGAAGACTTTAACCTTCCACCGCCCCCCACAC
GCACTCGCAAAATCATTCAGATGAAGCCCAAGACCCAAAGCCCACCAAAG
CCGACCGCACCAGCCAGCAAAGCCTCTGCAAAAGATAATGGCAAGACACC
AGCAAACAATGGAGCCTCAGCCAACTCCAAGAAGAAACAACCCAGCGCAA
CTAGTGCAGCGGGCCGAAAAATTGCTAGGAAAACAGCTCACAGCCTGATC
GAACGGCGGCGGAGATCTAAAATGAATGAAGAATTTGGAACTCTGAAAGA
CATGATCCCGGCGTGCAAAGGACAGGACATGCATAAGCTCGCCATTTTAC
AGGCAAGCATTGATTACGTCAATTACCTAGAACAATGTATACTCGATCTG
AAAACTGCCGGTAATCGACACGCAATGGCCTCGCCGCGAATGCCTCCCGC
TCCTCCTTCACCAACATCTCCGGAGGCTCTGGCAGAAGAATCGGGCCTGT
CCTCGGCTTCCGTGTCTCCGGAACTACCTCCAACTGATGCTGCGGCGGAT
GCAATCTCCCCGGCGTTCTCTCCCCGAAGTGGTGGTCCTATCGGGACGGC
GCCCGATTTTGCGTCCTCCATCACGCCAAGCCCGGCACTGGGTCCAACCC
ACCCATCCGACAATCCGTCGCGTTCTGAGCGTAGCTCATGGGCTGTGTCT
TCTTCCAGCACCTCCCCAGTAATGCAATCTCGGTATTCCATCGCATCTTC
TGCCGATGTGGACCACGAAGCATCCGCAGCCCTACTAATGCTGAACCGGG
ACTGCCGGGGCTCTGTCGGCTCGGTCCACGACGTGCCCACCAATTCCCTC
ACCCGGCATGGGAATCCCCACACCCAGGACCCACAAAGGAAGATCGGGAT
GAGCGTTAAAGACTTGCTTATTTCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46415CAN33_46415Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46415-T1.exon1CAN33_46415-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46415-T1.exon2CAN33_46415-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46415-T1.cdsCAN33_46415-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46415-T1CAN33_46415-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
ProductHelix-loop-helix DNA-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2650192..2651425 +
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