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CAN33_46480-T1, CAN33_46480-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46480-T1
Unique NameCAN33_46480-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2690044..2691049-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46480-T1 ID=CAN33_46480-T1|Name=CAN33_46480-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1006bp|location=Sequence derived from alignment at NKJJ01000022.1:2690044..2691049- (Aspergillus niger FDAARGOS_311)
ATGGCCACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGC
CGTCCACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATA
CCCAGGGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCC
GGCAAGGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGG
AAAGGTCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTC
ATGGTGAGAGGGGGTTTAATAATGTGTATGTTTTCCCCCTTCCCCTCCGC
CCTTGTCATCTTTGACACGGAGAGAAAGATGATCTTGAATAAATTCTAAC
GAGAATCAATGGGATCGGATAGTCACTCCATCGACCTCGCCCCCGTGAAC
CTCGACCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACCCG
CCCCATCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCA
AAGAAGGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAG
GTTCCCGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAG
GGCTTCGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCA
CCACGAGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAG
ATGCATCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGC
GTTGGCGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGA
AGGAGATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGAT
ATTGAGTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCT
GAAGCCGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGA
AGTCTGCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTT
TGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2690044..2691049-

>CAN33_46480-T1 ID=CAN33_46480-T1|Name=CAN33_46480-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1818bp|location=Sequence derived from alignment at NKJJ01000022.1:2690044..2691049- (Aspergillus niger FDAARGOS_311)
TCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCCTGGA
TCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGAACTC
GCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTCTCGG
CCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTGCTCA
AGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTATCGCG
GCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCAAGTC
TGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCGCTTG
CGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGATGGA
GAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGTATAG
ATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGACCCAG
CGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCCGAGT
TTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTAGGAA
GGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGGCCACCACCACGA
CGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGT
CGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAA
CAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCT
CCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCG
TTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTT
TAATAATGTTCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCC
AATCCTGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTC
CGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAA
GCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACA
GTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCT
GCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTA
TACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTG
TGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGT
GAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTT
CGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATA
GGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAA
GGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGG
TGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGGCCA
CCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCAC
CAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGG
CGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGG
GTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTC
CCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGTGA
GAGGGGGTTTAATAATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46480CAN33_46480Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46480-T1CAN33_46480-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46480-T1.cdsCAN33_46480-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46480-T1.exon2CAN33_46480-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46480-T1.exon1CAN33_46480-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264A2D
DBxrefInterPro:IPR036227
DBxrefInterPro:IPR030878
DBxrefInterPro:IPR005749
DBxrefInterPro:IPR021131
DBxrefPFAM:PF00828
Productribosomal protein L15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2690044..2691049 -
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