|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2758692..2759367+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46565-T1 ID=CAN33_46565-T1|Name=CAN33_46565-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=676bp|location=Sequence derived from alignment at NKJJ01000022.1:2758692..2759367+ (Aspergillus niger FDAARGOS_311)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTGTGAGCAACCC
CCTTGATCTCAGTCGCATGAGGGCATTCGGACCTCCTATATTCAATGCAA
AGCTAATGGTTGACCCCCGACAGCTCAATTGAAGAAGTACACCGAGTCGC
ACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGGTTCGTCTACCACA
GCCCTTTCCCGGCCAAACAACACTCAATTAATTACTAACGCTTTCTTCTA
TCTCTGCAGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGT
GACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGG
TGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTT
CTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAAT
GCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGAT
CGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTT
ACAAGGCTACTATCGATGAGGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2758692..2759367+ >CAN33_46565-T1 ID=CAN33_46565-T1|Name=CAN33_46565-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1557bp|location=Sequence derived from alignment at NKJJ01000022.1:2758692..2759367+ (Aspergillus niger FDAARGOS_311)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTCTCAATTGAAG
AAGTACACCGAGTCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGAC
TGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTG
TGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCC
GTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGT
CTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGT
TCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTG
AACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGC
TACTATCGATGAGGAGTAAATGTCTTTCGCCGCCCGATCCCTCCGCCCCT
TCGCTTCTCGCGTCCTGTCGCAGAAGCTCCCCCTCTCTTCCGTCTGCAGG
GCCGCACCCGCCAGTTTCCCGCGGGGAAGTGTCCGGAGCTTCTCCCAGAG
CCCACTTTCTCAATTGAAGAAGTACACCGAGTCGCACGAGTGGATCGAGC
TCGCCGCCGACGGCAAGACTGCCAAGATCGGCATTACTGAATACGCTGCC
AAGTCCCTTGGTGACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGA
GGTTAGCGCCGGTGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTT
CGGACGTCCTTTCTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTG
CTGGATGACAATGCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTG
GATTGCGGAGATCGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGG
ACGAGGCTGCTTACAAGGCTACTATCGATGAGGAGTAAATGTCTTTCGCC
GCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTCGCAGAAGCTCCC
CCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCCCGCGGGGAAGTG
TCCGGAGCTTCTCCCAGAGCCCACTTTCTCAATTGAAGAAGTACACCGAG
TCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGCCAAGATCGG
CATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTGTGTTCGTTGAGC
TCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCCGTCGGTGCTGTT
GAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGTCTCGGGAACTGT
TACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGTTCATCAACCAGA
GCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTGAACGATGTCGCG
GAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGCTACTATCGATGA
GGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005960 | glycine cleavage complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019464 | glycine decarboxylation via glycine cleavage system |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264SUZ |
| DBxref | InterPro:IPR011053 |
| DBxref | InterPro:IPR000089 |
| DBxref | InterPro:IPR002930 |
| DBxref | InterPro:IPR003016 |
| DBxref | InterPro:IPR017453 |
| DBxref | InterPro:IPR033753 |
| DBxref | PFAM:PF01597 |
| Product | glycine cleavage system H protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2758692..2759367 + |
|
