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CAN33_46570-T1, CAN33_46570-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46570-T1
Unique NameCAN33_46570-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2760210..2761653+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46570-T1 ID=CAN33_46570-T1|Name=CAN33_46570-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1444bp|location=Sequence derived from alignment at NKJJ01000022.1:2760210..2761653+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCAATCTCCCTATCCCTATTCCTCCGCGCACCCCGACGCCTCC
CCCGGATGATTCCCCTAGCACTTCGAACCAGTCACCCCGGCTCCAAGACA
AAGACTCATTATCACCATTGAGGGACACGTTTCCCAATTTGCGGGGCTCG
TTAGATCCCAGTGATGCCAATCGCTTGAGTCCTACACGGGCGGGTTTCAA
CCTCAGCCCAGCAGACGCATTACAGCCGAGTGATCAGAGCGACAATGCTT
CAGCAGGACCATTCAATTTCAAGACTACGACTATGGCGAAGAGTCCGGTC
GTGAAGTCTGTGAGTCGTTGCTTACTTCCACCTTGGAGTTGATTATACTA
ATGGAGCCGCCAATGCGACGTAGAACATTGGCCAGCGACGTGGACACAAA
TATAAGCACAGTAGCATTTCGCATCAGATCTTCTTAGAACCGCCCCCACG
AGCGCCTCTGGCTCTGCCCAACTCGCTGCCCATACCGACGTTCAAAGAAT
ATCGCTCCAGTATGTCCAAGGACCAGACCACCCGGTTCTGGTGGAGCGTT
TGCCATATGTCTGTTGCCGCATATACCTTGTGGAGTGCCCATGGGTCTCT
GGCTATGACGGCTCTGTCGCACTTGATACTGTTTGATTCAATCGGCGCAT
TGCTCTGCGTTGCTGTCGACATCCTGGGCAACTTTGAAGTATGGAAGCGA
TCCAGTGTTCGACACCCGTTCGGTCTGGAGCGCGCAGAAGTGCTTGCAGG
GTTCGCCATGTGCGTACTCTTGCTATTCATGGGGATGGATCTCATTTCCC
ATAGTCTGCAACACTTCCTGGAGTCTTCCGGTCATGAACCTCACCATACC
CATGTTCACGAACGTGTCTCCCTTGGTCGTGTGGATTTTACCGCTCTGCT
GGCCATCTCATCAACATTGATTTCTGCCATCGGTCTCAAGAACCATGGAC
GGATAGGAAAGGCGATGCGGTTCGGGTACATTGAGTCACTGCCCTCGGTT
CTTAGTAACCCGTCCCATTTCCTGACGCTATCATGCTCCACGCTGCTCCT
CTTACTGCCCCTCGTCTCCATCAAGCTCTACAATTGGCTGGATGTTCTAC
TTTCCAGCACGATCTCCATCTCCATGTGTGTTATCGGAGTGCGCCTAGTG
AAAACACTGGGATCCATGCTTCTCATGTCCTACTCCGGACCGGGGGTGTC
CGAGGTGATCCGAGATATCGAGGCCGATCCCTGCGTCTACGGCGTCGACG
ATGCCCGGTTCTGGCAGGTTCATTACGGGCTCTGCATGGCTAACCTAAAG
CTCCGAGTATCCGGAACCGAGGAAAACCTTGTGCGACTGCGTGAACGGGT
AGCCAGCCTCATCAAGAACCGGTTGGGTGGAGGGTACGGATCCGGGGGGC
AGAAATGGGAAGTTTCGCTGCAGTTTACGGCTGAGAAGGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2760210..2761653+

>CAN33_46570-T1 ID=CAN33_46570-T1|Name=CAN33_46570-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2760bp|location=Sequence derived from alignment at NKJJ01000022.1:2760210..2761653+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCAATCTCCCTATCCCTATTCCTCCGCGCACCCCGACGCCTCC
CCCGGATGATTCCCCTAGCACTTCGAACCAGTCACCCCGGCTCCAAGACA
AAGACTCATTATCACCATTGAGGGACACGTTTCCCAATTTGCGGGGCTCG
TTAGATCCCAGTGATGCCAATCGCTTGAGTCCTACACGGGCGGGTTTCAA
CCTCAGCCCAGCAGACGCATTACAGCCGAGTGATCAGAGCGACAATGCTT
CAGCAGGACCATTCAATTTCAAGACTACGACTATGGCGAAGAGTCCGGTC
GTGAAGTCTAACATTGGCCAGCGACGTGGACACAAATATAAGCACAGTAG
CATTTCGCATCAGATCTTCTTAGAACCGCCCCCACGAGCGCCTCTGGCTC
TGCCCAACTCGCTGCCCATACCGACGTTCAAAGAATATCGCTCCAGTATG
TCCAAGGACCAGACCACCCGGTTCTGGTGGAGCGTTTGCCATATGTCTGT
TGCCGCATATACCTTGTGGAGTGCCCATGGGTCTCTGGCTATGACGGCTC
TGTCGCACTTGATACTGTTTGATTCAATCGGCGCATTGCTCTGCGTTGCT
GTCGACATCCTGGGCAACTTTGAAGTATGGAAGCGATCCAGTGTTCGACA
CCCGTTCGGTCTGGAGCGCGCAGAAGTGCTTGCAGGGTTCGCCATGTGCG
TACTCTTGCTATTCATGGGGATGGATCTCATTTCCCATAGTCTGCAACAC
TTCCTGGAGTCTTCCGGTCATGAACCTCACCATACCCATGTTCACGAACG
TGTCTCCCTTGGTCGTGTGGATTTTACCGCTCTGCTGGCCATCTCATCAA
CATTGATTTCTGCCATCGGTCTCAAGAACCATGGACGGATAGGAAAGGCG
ATGCGGTTCGGGTACATTGAGTCACTGCCCTCGGTTCTTAGTAACCCGTC
CCATTTCCTGACGCTATCATGCTCCACGCTGCTCCTCTTACTGCCCCTCG
TCTCCATCAAGCTCTACAATTGGCTGGATGTTCTACTTTCCAGCACGATC
TCCATCTCCATGTGTGTTATCGGAGTGCGCCTAGTGAAAACACTGGGATC
CATGCTTCTCATGTCCTACTCCGGACCGGGGGTGTCCGAGGTGATCCGAG
ATATCGAGGCCGATCCCTGCGTCTACGGCGTCGACGATGCCCGGTTCTGG
CAGGTTCATTACGGGCTCTGCATGGCTAACCTAAAGCTCCGAGTATCCGG
AACCGAGGAAAACCTTGTGCGACTGCGTGAACGGGTAGCCAGCCTCATCA
AGAACCGGTTGGGTGGAGGGTACGGATCCGGGGGGCAGAAATGGGAAGTT
TCGCTGCAGTTTACGGCTGAGAAGGCTTGAATGGCATCCAATCTCCCTAT
CCCTATTCCTCCGCGCACCCCGACGCCTCCCCCGGATGATTCCCCTAGCA
CTTCGAACCAGTCACCCCGGCTCCAAGACAAAGACTCATTATCACCATTG
AGGGACACGTTTCCCAATTTGCGGGGCTCGTTAGATCCCAGTGATGCCAA
TCGCTTGAGTCCTACACGGGCGGGTTTCAACCTCAGCCCAGCAGACGCAT
TACAGCCGAGTGATCAGAGCGACAATGCTTCAGCAGGACCATTCAATTTC
AAGACTACGACTATGGCGAAGAGTCCGGTCGTGAAGTCTAACATTGGCCA
GCGACGTGGACACAAATATAAGCACAGTAGCATTTCGCATCAGATCTTCT
TAGAACCGCCCCCACGAGCGCCTCTGGCTCTGCCCAACTCGCTGCCCATA
CCGACGTTCAAAGAATATCGCTCCAGTATGTCCAAGGACCAGACCACCCG
GTTCTGGTGGAGCGTTTGCCATATGTCTGTTGCCGCATATACCTTGTGGA
GTGCCCATGGGTCTCTGGCTATGACGGCTCTGTCGCACTTGATACTGTTT
GATTCAATCGGCGCATTGCTCTGCGTTGCTGTCGACATCCTGGGCAACTT
TGAAGTATGGAAGCGATCCAGTGTTCGACACCCGTTCGGTCTGGAGCGCG
CAGAAGTGCTTGCAGGGTTCGCCATGTGCGTACTCTTGCTATTCATGGGG
ATGGATCTCATTTCCCATAGTCTGCAACACTTCCTGGAGTCTTCCGGTCA
TGAACCTCACCATACCCATGTTCACGAACGTGTCTCCCTTGGTCGTGTGG
ATTTTACCGCTCTGCTGGCCATCTCATCAACATTGATTTCTGCCATCGGT
CTCAAGAACCATGGACGGATAGGAAAGGCGATGCGGTTCGGGTACATTGA
GTCACTGCCCTCGGTTCTTAGTAACCCGTCCCATTTCCTGACGCTATCAT
GCTCCACGCTGCTCCTCTTACTGCCCCTCGTCTCCATCAAGCTCTACAAT
TGGCTGGATGTTCTACTTTCCAGCACGATCTCCATCTCCATGTGTGTTAT
CGGAGTGCGCCTAGTGAAAACACTGGGATCCATGCTTCTCATGTCCTACT
CCGGACCGGGGGTGTCCGAGGTGATCCGAGATATCGAGGCCGATCCCTGC
GTCTACGGCGTCGACGATGCCCGGTTCTGGCAGGTTCATTACGGGCTCTG
CATGGCTAACCTAAAGCTCCGAGTATCCGGAACCGAGGAAAACCTTGTGC
GACTGCGTGAACGGGTAGCCAGCCTCATCAAGAACCGGTTGGGTGGAGGG
TACGGATCCGGGGGGCAGAAATGGGAAGTTTCGCTGCAGTTTACGGCTGA
GAAGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46570CAN33_46570Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46570-T1.exon1CAN33_46570-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46570-T1.exon2CAN33_46570-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46570-T1.cdsCAN33_46570-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46570-T1CAN33_46570-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR002524
DBxrefInterPro:IPR027469
DBxrefPFAM:PF01545
ProductCation efflux family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2760210..2761653 +
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