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CAN33_46600-T1, CAN33_46600-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46600-T1
Unique NameCAN33_46600-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2771539..2772228+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46600-T1 ID=CAN33_46600-T1|Name=CAN33_46600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=690bp|location=Sequence derived from alignment at NKJJ01000022.1:2771539..2772228+ (Aspergillus niger FDAARGOS_311)
ATGAAGCACATGCGCCGTCTCGTCCCTCCGACACGGACTCTTCGCCAGAT
CCTCCTCACTCCTCAACCTGCCTTTCGACCTCAGTTCTTCCAACTCAGTC
TCCGAATCAATGAAGTCCCCTCTCGTTCCTACAGCCCAACTAGTCCTCTC
CTCAAATTTCGTACAAGAGCTACTCCTCGCGCCCTGCCGCAATACGTCCT
CGACGAAGAGATCGGAGCACAATATGTCCAGATCGTGAATGAAAACAACA
GCCTTGACCCTCCTGTTAGCCTTCGGGATGCTCTGCGACAAATCGACCGT
TCCAGTCAAACCTTGCAGCAGGTGTCACCGGGTAGTGGGGATGGGGTGCC
GATTTGCAAGGTTGTAAACAAGTTCGAGCTGCGGGAAATAGCAAAGGCAA
AGGCGAAACCTGCTAAGGATGGTCTTAAGCAGCTAGAACTGAACTGGGCC
ATTGACGCCCATGATCTCTCACATCGCTTAAAGCAACTCACGAATTTCCT
CGAGAAGGGTCGGAAGGTGGAGCTGATCTTGACGAGAAAAAAGCACAAGC
GTTCGCCTACCGTGGAGGAAGTGAAGAACCTCATGGACAAGGTGATGGAG
ACGGTGCGGGAGGCCAAGGCGATGCCGGTCAGACCCATGGAAGGGGAGCC
GGGCAAACATGTGGTGTTGGTGGTGAAGAAAGATGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2771539..2772228+

>CAN33_46600-T1 ID=CAN33_46600-T1|Name=CAN33_46600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=690bp|location=Sequence derived from alignment at NKJJ01000022.1:2771539..2772228+ (Aspergillus niger FDAARGOS_311)
ATGAAGCACATGCGCCGTCTCGTCCCTCCGACACGGACTCTTCGCCAGAT
CCTCCTCACTCCTCAACCTGCCTTTCGACCTCAGTTCTTCCAACTCAGTC
TCCGAATCAATGAAGTCCCCTCTCGTTCCTACAGCCCAACTAGTCCTCTC
CTCAAATTTCGTACAAGAGCTACTCCTCGCGCCCTGCCGCAATACGTCCT
CGACGAAGAGATCGGAGCACAATATGTCCAGATCGTGAATGAAAACAACA
GCCTTGACCCTCCTGTTAGCCTTCGGGATGCTCTGCGACAAATCGACCGT
TCCAGTCAAACCTTGCAGCAGGTGTCACCGGGTAGTGGGGATGGGGTGCC
GATTTGCAAGGTTGTAAACAAGTTCGAGCTGCGGGAAATAGCAAAGGCAA
AGGCGAAACCTGCTAAGGATGGTCTTAAGCAGCTAGAACTGAACTGGGCC
ATTGACGCCCATGATCTCTCACATCGCTTAAAGCAACTCACGAATTTCCT
CGAGAAGGGTCGGAAGGTGGAGCTGATCTTGACGAGAAAAAAGCACAAGC
GTTCGCCTACCGTGGAGGAAGTGAAGAACCTCATGGACAAGGTGATGGAG
ACGGTGCGGGAGGCCAAGGCGATGCCGGTCAGACCCATGGAAGGGGAGCC
GGGCAAACATGTGGTGTTGGTGGTGAAGAAAGATGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46600CAN33_46600Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46600-T1.exon1CAN33_46600-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46600-T1.cdsCAN33_46600-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46600-T1CAN33_46600-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036788
DBxrefInterPro:IPR019815
DBxrefPFAM:PF00707
ProductTranslation initiation factor IF-3 C-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2771539..2772228 +
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