You are here

Home

CAN33_46680-T1, CAN33_46680-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46680-T1
Unique NameCAN33_46680-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2805466..2806937-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46680-T1 ID=CAN33_46680-T1|Name=CAN33_46680-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1472bp|location=Sequence derived from alignment at NKJJ01000022.1:2805466..2806937- (Aspergillus niger FDAARGOS_311)
ATGAGTGACCCCGTTGGCGCAGACGATCTGGTCTATGTCGCACAGGCCCA
CGTTCCCCAGAAGGAGATCCAGGCCGTCGATGAGAAGAAGGAGCCTCATA
TCCCCATCAACGAGAAAGAAACCACAGTGGTGTCGACGGTGCCCTCAATC
CACAATGTCCACGATGATGGGCGCGAATACCCCACTGAGGAAGAGGAGAG
GACCCTGCGTCGAGTCTCCGACTCGGTTAGCTGGACCGCCTACACGGTCG
CGTTTGTCGAGCTGTGCGAGCGCTTCTCATACTATGGAACAACTGCAGTT
TGTAGGTTTAGCAGGAGGTTGTTGAAAGCTGTTTCTAACCTCTATAGATG
TCAACTTTATTCAGCAGCCTCTTCCCGCCGGCTCCACCACGGGTGCCGGA
TACAGTGGACAGTCCGGTGCTCTGGGCCAGGGTGAACGGACCTCTACTGC
GCTGACAACCTGTAAGTCTCCTCTAGGCCTCAAGCATGAGAGCGGTCGCT
AACTGAACTTACAGTCAACACCTTCTGGTGCTACGTCATGCCCATCTTGG
GTGCCTGGATTGCCGATGAATACTGGGGTCGTATGCGAACCATCCAAGTC
TCCATCGGATTTGCTATGCTCGGTCACATTATCATCATCATCTCATCTAT
TCCCCGGTTATTGTACATGCAAACGGTGCACTGGCTTGCTTCGCTGTTGG
TCTGGTGATTTTCGGCATTGGTGTGGGCGGATTCAAGTAGGTGCTGTCTA
GTCATCTCGAGAATCAAACTAACCTGTCCAGATCCAATATCTCGCCCCTG
ATCGCAGAACAATACAAGGAGACCAGACTCTTCATCAAGACCATTCCTAA
GACTGGCGAGCGCGTCATCGTCGATCCTGCGCAGACCATCACTCGCATCT
TCCTCTACTTCTACTTCATGATTAACGTCGGCTCCCTGATCGGATCCGTG
GCCATGGTGTACGCGGAGAAGTATGTGGGATACTGGCTGGCATTCCTGCT
GCCGACCATCATGTTCGGTATTTGTCCGATTGTTTTGTTCTTCTGTCGCA
AGCGATACACCGTGACGCCCCCGACTGGATCGGTCGTGACCAAAGCCTTC
CAGCTGTGGAGCCTGGCTCTTCGGGGCCAATGGTCCTGGAACCCTGTCAC
TTTGTAAGTCTATCTGCTACATTACTCAAAACCTGGCTAACGGATCAGCT
ACCATCGCTGCAAATCTACCGAGTTTTGGGACAGTGTCAAGCCCAGTCGT
CTTGCCAACAAGCCCACGTGGATGACCTTTGATGACCAGTGGGTCGAAGA
AGTGCGTCGTGCCGTCAAGGCCTGTGCTGTCTTTGCCTGGTACCCTCTTT
ACTGTCAGTTCTTCACAATAATGTAACCGAGCGATGCTAACCTCCATAGG
GCTGGCCTACGGACAAATGACCAACAACCTAACCTCCCAGGCGGCCACCA
TGCAGCTGCACGGCGTGCCTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2805466..2806937-

>CAN33_46680-T1 ID=CAN33_46680-T1|Name=CAN33_46680-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6246bp|location=Sequence derived from alignment at NKJJ01000022.1:2805466..2806937- (Aspergillus niger FDAARGOS_311)
GGCTGGCCTACGGACAAATGACCAACAACCTAACCTCCCAGGCGGCCACC
ATGCAGCTGCACGGCGTGCCTAACTACCATCGCTGCAAATCTACCGAGTT
TTGGGACAGTGTCAAGCCCAGTCGTCTTGCCAACAAGCCCACGTGGATGA
CCTTTGATGACCAGTGGGTCGAAGAAGTGCGTCGTGCCGTCAAGGCCTGT
GCTGTCTTTGCCTGAACAATACAAGGAGACCAGACTCTTCATCAAGACCA
TTCCTAAGACTGGCGAGCGCGTCATCGTCGATCCTGCGCAGACCATCACT
CGCATCTTCCTCTACTTCTACTTCATGATTAACGTCGGCTCCCTGATCGG
ATCCGTGGCCATGGTGTACGCGGAGAAGTATGTGGGATACTGGCTGGCAT
TCCTGCTGCCGACCATCATGTTCGGTATTTGTCCGATTGTTTTGTTCTTC
TGTCGCAAGCGATACACCGTGACGCCCCCGACTGGATCGGTCGTGACCAA
AGCCTTCCAGCTGTGGAGCCTGGCTCTTCGGGGCCAATGGTCCTGGAACC
CTGTCACTTTTCAACACCTTCTGGTGCTACGTCATGCCCATCTTGGGTGC
CTGGATTGCCGATGAATACTGGGGTCATGTCAACTTTATTCAGCAGCCTC
TTCCCGCCGGCTCCACCACGGGTGCCGGATACAGTGGACAGTCCGGTGCT
CTGGGCCAGGGTGAACGGACCTCTACTGCGCTGACAACCTATGAGTGACC
CCGTTGGCGCAGACGATCTGGTCTATGTCGCACAGGCCCACGTTCCCCAG
AAGGAGATCCAGGCCGTCGATGAGAAGAAGGAGCCTCATATCCCCATCAA
CGAGAAAGAAACCACAGTGGTGTCGACGGTGCCCTCAATCCACAATGTCC
ACGATGATGGGCGCGAATACCCCACTGAGGAAGAGGAGAGGACCCTGCGT
CGAGTCTCCGACTCGGTTAGCTGGACCGCCTACACGGTCGCGTTTGTCGA
GCTGTGCGAGCGCTTCTCATACTATGGAACAACTGCAGTTTGGCTGGCCT
ACGGACAAATGACCAACAACCTAACCTCCCAGGCGGCCACCATGCAGCTG
CACGGCGTGCCTAACTACCATCGCTGCAAATCTACCGAGTTTTGGGACAG
TGTCAAGCCCAGTCGTCTTGCCAACAAGCCCACGTGGATGACCTTTGATG
ACCAGTGGGTCGAAGAAGTGCGTCGTGCCGTCAAGGCCTGTGCTGTCTTT
GCCTGAACAATACAAGGAGACCAGACTCTTCATCAAGACCATTCCTAAGA
CTGGCGAGCGCGTCATCGTCGATCCTGCGCAGACCATCACTCGCATCTTC
CTCTACTTCTACTTCATGATTAACGTCGGCTCCCTGATCGGATCCGTGGC
CATGGTGTACGCGGAGAAGTATGTGGGATACTGGCTGGCATTCCTGCTGC
CGACCATCATGTTCGGTATTTGTCCGATTGTTTTGTTCTTCTGTCGCAAG
CGATACACCGTGACGCCCCCGACTGGATCGGTCGTGACCAAAGCCTTCCA
GCTGTGGAGCCTGGCTCTTCGGGGCCAATGGTCCTGGAACCCTGTCACTT
TTCAACACCTTCTGGTGCTACGTCATGCCCATCTTGGGTGCCTGGATTGC
CGATGAATACTGGGGTCATGTCAACTTTATTCAGCAGCCTCTTCCCGCCG
GCTCCACCACGGGTGCCGGATACAGTGGACAGTCCGGTGCTCTGGGCCAG
GGTGAACGGACCTCTACTGCGCTGACAACCTATGAGTGACCCCGTTGGCG
CAGACGATCTGGTCTATGTCGCACAGGCCCACGTTCCCCAGAAGGAGATC
CAGGCCGTCGATGAGAAGAAGGAGCCTCATATCCCCATCAACGAGAAAGA
AACCACAGTGGTGTCGACGGTGCCCTCAATCCACAATGTCCACGATGATG
GGCGCGAATACCCCACTGAGGAAGAGGAGAGGACCCTGCGTCGAGTCTCC
GACTCGGTTAGCTGGACCGCCTACACGGTCGCGTTTGTCGAGCTGTGCGA
GCGCTTCTCATACTATGGAACAACTGCAGTTTGGCTGGCCTACGGACAAA
TGACCAACAACCTAACCTCCCAGGCGGCCACCATGCAGCTGCACGGCGTG
CCTAACTACCATCGCTGCAAATCTACCGAGTTTTGGGACAGTGTCAAGCC
CAGTCGTCTTGCCAACAAGCCCACGTGGATGACCTTTGATGACCAGTGGG
TCGAAGAAGTGCGTCGTGCCGTCAAGGCCTGTGCTGTCTTTGCCTGAACA
ATACAAGGAGACCAGACTCTTCATCAAGACCATTCCTAAGACTGGCGAGC
GCGTCATCGTCGATCCTGCGCAGACCATCACTCGCATCTTCCTCTACTTC
TACTTCATGATTAACGTCGGCTCCCTGATCGGATCCGTGGCCATGGTGTA
CGCGGAGAAGTATGTGGGATACTGGCTGGCATTCCTGCTGCCGACCATCA
TGTTCGGTATTTGTCCGATTGTTTTGTTCTTCTGTCGCAAGCGATACACC
GTGACGCCCCCGACTGGATCGGTCGTGACCAAAGCCTTCCAGCTGTGGAG
CCTGGCTCTTCGGGGCCAATGGTCCTGGAACCCTGTCACTTTTCAACACC
TTCTGGTGCTACGTCATGCCCATCTTGGGTGCCTGGATTGCCGATGAATA
CTGGGGTCATGTCAACTTTATTCAGCAGCCTCTTCCCGCCGGCTCCACCA
CGGGTGCCGGATACAGTGGACAGTCCGGTGCTCTGGGCCAGGGTGAACGG
ACCTCTACTGCGCTGACAACCTATGAGTGACCCCGTTGGCGCAGACGATC
TGGTCTATGTCGCACAGGCCCACGTTCCCCAGAAGGAGATCCAGGCCGTC
GATGAGAAGAAGGAGCCTCATATCCCCATCAACGAGAAAGAAACCACAGT
GGTGTCGACGGTGCCCTCAATCCACAATGTCCACGATGATGGGCGCGAAT
ACCCCACTGAGGAAGAGGAGAGGACCCTGCGTCGAGTCTCCGACTCGGTT
AGCTGGACCGCCTACACGGTCGCGTTTGTCGAGCTGTGCGAGCGCTTCTC
ATACTATGGAACAACTGCAGTTTGGCTGGCCTACGGACAAATGACCAACA
ACCTAACCTCCCAGGCGGCCACCATGCAGCTGCACGGCGTGCCTAACTAC
CATCGCTGCAAATCTACCGAGTTTTGGGACAGTGTCAAGCCCAGTCGTCT
TGCCAACAAGCCCACGTGGATGACCTTTGATGACCAGTGGGTCGAAGAAG
TGCGTCGTGCCGTCAAGGCCTGTGCTGTCTTTGCCTGAACAATACAAGGA
GACCAGACTCTTCATCAAGACCATTCCTAAGACTGGCGAGCGCGTCATCG
TCGATCCTGCGCAGACCATCACTCGCATCTTCCTCTACTTCTACTTCATG
ATTAACGTCGGCTCCCTGATCGGATCCGTGGCCATGGTGTACGCGGAGAA
GTATGTGGGATACTGGCTGGCATTCCTGCTGCCGACCATCATGTTCGGTA
TTTGTCCGATTGTTTTGTTCTTCTGTCGCAAGCGATACACCGTGACGCCC
CCGACTGGATCGGTCGTGACCAAAGCCTTCCAGCTGTGGAGCCTGGCTCT
TCGGGGCCAATGGTCCTGGAACCCTGTCACTTTTCAACACCTTCTGGTGC
TACGTCATGCCCATCTTGGGTGCCTGGATTGCCGATGAATACTGGGGTCA
TGTCAACTTTATTCAGCAGCCTCTTCCCGCCGGCTCCACCACGGGTGCCG
GATACAGTGGACAGTCCGGTGCTCTGGGCCAGGGTGAACGGACCTCTACT
GCGCTGACAACCTATGAGTGACCCCGTTGGCGCAGACGATCTGGTCTATG
TCGCACAGGCCCACGTTCCCCAGAAGGAGATCCAGGCCGTCGATGAGAAG
AAGGAGCCTCATATCCCCATCAACGAGAAAGAAACCACAGTGGTGTCGAC
GGTGCCCTCAATCCACAATGTCCACGATGATGGGCGCGAATACCCCACTG
AGGAAGAGGAGAGGACCCTGCGTCGAGTCTCCGACTCGGTTAGCTGGACC
GCCTACACGGTCGCGTTTGTCGAGCTGTGCGAGCGCTTCTCATACTATGG
AACAACTGCAGTTTGGCTGGCCTACGGACAAATGACCAACAACCTAACCT
CCCAGGCGGCCACCATGCAGCTGCACGGCGTGCCTAACTACCATCGCTGC
AAATCTACCGAGTTTTGGGACAGTGTCAAGCCCAGTCGTCTTGCCAACAA
GCCCACGTGGATGACCTTTGATGACCAGTGGGTCGAAGAAGTGCGTCGTG
CCGTCAAGGCCTGTGCTGTCTTTGCCTGAACAATACAAGGAGACCAGACT
CTTCATCAAGACCATTCCTAAGACTGGCGAGCGCGTCATCGTCGATCCTG
CGCAGACCATCACTCGCATCTTCCTCTACTTCTACTTCATGATTAACGTC
GGCTCCCTGATCGGATCCGTGGCCATGGTGTACGCGGAGAAGTATGTGGG
ATACTGGCTGGCATTCCTGCTGCCGACCATCATGTTCGGTATTTGTCCGA
TTGTTTTGTTCTTCTGTCGCAAGCGATACACCGTGACGCCCCCGACTGGA
TCGGTCGTGACCAAAGCCTTCCAGCTGTGGAGCCTGGCTCTTCGGGGCCA
ATGGTCCTGGAACCCTGTCACTTTTCAACACCTTCTGGTGCTACGTCATG
CCCATCTTGGGTGCCTGGATTGCCGATGAATACTGGGGTCATGTCAACTT
TATTCAGCAGCCTCTTCCCGCCGGCTCCACCACGGGTGCCGGATACAGTG
GACAGTCCGGTGCTCTGGGCCAGGGTGAACGGACCTCTACTGCGCTGACA
ACCTATGAGTGACCCCGTTGGCGCAGACGATCTGGTCTATGTCGCACAGG
CCCACGTTCCCCAGAAGGAGATCCAGGCCGTCGATGAGAAGAAGGAGCCT
CATATCCCCATCAACGAGAAAGAAACCACAGTGGTGTCGACGGTGCCCTC
AATCCACAATGTCCACGATGATGGGCGCGAATACCCCACTGAGGAAGAGG
AGAGGACCCTGCGTCGAGTCTCCGACTCGGTTAGCTGGACCGCCTACACG
GTCGCGTTTGTCGAGCTGTGCGAGCGCTTCTCATACTATGGAACAACTGC
AGTTTGGCTGGCCTACGGACAAATGACCAACAACCTAACCTCCCAGGCGG
CCACCATGCAGCTGCACGGCGTGCCTAACTACCATCGCTGCAAATCTACC
GAGTTTTGGGACAGTGTCAAGCCCAGTCGTCTTGCCAACAAGCCCACGTG
GATGACCTTTGATGACCAGTGGGTCGAAGAAGTGCGTCGTGCCGTCAAGG
CCTGTGCTGTCTTTGCCTGAACAATACAAGGAGACCAGACTCTTCATCAA
GACCATTCCTAAGACTGGCGAGCGCGTCATCGTCGATCCTGCGCAGACCA
TCACTCGCATCTTCCTCTACTTCTACTTCATGATTAACGTCGGCTCCCTG
ATCGGATCCGTGGCCATGGTGTACGCGGAGAAGTATGTGGGATACTGGCT
GGCATTCCTGCTGCCGACCATCATGTTCGGTATTTGTCCGATTGTTTTGT
TCTTCTGTCGCAAGCGATACACCGTGACGCCCCCGACTGGATCGGTCGTG
ACCAAAGCCTTCCAGCTGTGGAGCCTGGCTCTTCGGGGCCAATGGTCCTG
GAACCCTGTCACTTTTCAACACCTTCTGGTGCTACGTCATGCCCATCTTG
GGTGCCTGGATTGCCGATGAATACTGGGGTCATGTCAACTTTATTCAGCA
GCCTCTTCCCGCCGGCTCCACCACGGGTGCCGGATACAGTGGACAGTCCG
GTGCTCTGGGCCAGGGTGAACGGACCTCTACTGCGCTGACAACCTATGAG
TGACCCCGTTGGCGCAGACGATCTGGTCTATGTCGCACAGGCCCACGTTC
CCCAGAAGGAGATCCAGGCCGTCGATGAGAAGAAGGAGCCTCATATCCCC
ATCAACGAGAAAGAAACCACAGTGGTGTCGACGGTGCCCTCAATCCACAA
TGTCCACGATGATGGGCGCGAATACCCCACTGAGGAAGAGGAGAGGACCC
TGCGTCGAGTCTCCGACTCGGTTAGCTGGACCGCCTACACGGTCGCGTTT
GTCGAGCTGTGCGAGCGCTTCTCATACTATGGAACAACTGCAGTTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006857oligopeptide transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46680CAN33_46680Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46680-T1CAN33_46680-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46680-T1.cdsCAN33_46680-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46680-T1.exon6CAN33_46680-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_46680-T1.exon5CAN33_46680-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_46680-T1.exon4CAN33_46680-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_46680-T1.exon3CAN33_46680-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46680-T1.exon2CAN33_46680-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46680-T1.exon1CAN33_46680-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR018456
DBxrefInterPro:IPR000109
ProductPOT family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2805466..2806937 -
Powered by Drupal