|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2870541..2872000- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46785-T1 ID=CAN33_46785-T1|Name=CAN33_46785-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1460bp|location=Sequence derived from alignment at NKJJ01000022.1:2870541..2872000- (Aspergillus niger FDAARGOS_311)
ATGAGGTGCATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCT
TGAGCATGACTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTG
GATATCCCAAGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGG
CAGGCAAATGCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGG
GATTGACACCGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTG
AGGTGTTGAGAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCA
GAAATTATCAATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTC
GACAGGCGAGGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGG
GATGTGATTTCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGA
CTCCGACAAAAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAG
AACTCTCCAACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAA
GTGATGAAAAAGCCATGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTCC
GAAAAGCCCTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGGC
GAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACATT
GATCTATCTCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCTG
CTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCGA
CACCGACTGCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTCC
AGACAATTCTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTCT
GGGACGCCAACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGGC
CAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTGAG
CCAGGGAAGCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGGAC
AGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGGCT
TGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACAGT
GCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCTGG
CTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTACAG
TTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACGGT
GGAGACGTATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACGTG
CGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAAGT
GATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTATG
GGGTCTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2870541..2872000- >CAN33_46785-T1 ID=CAN33_46785-T1|Name=CAN33_46785-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2724bp|location=Sequence derived from alignment at NKJJ01000022.1:2870541..2872000- (Aspergillus niger FDAARGOS_311)
GCGAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACA
TTGATCTATCTCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCC
TGCTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCC
GACACCGACTGCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGT
CCAGACAATTCTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGT
CTGGGACGCCAACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACG
GCCAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTG
AGCCAGGGAAGCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGG
ACAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGG
CTTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACA
GTGCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCT
GGCTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTAC
AGTTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACG
GTGGAGACGTATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACG
TGCGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAA
GTGATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTA
TGGGGTCTTTAGATGAGGTGCATGAACCAAAGCACGTTTCTCCAAAACTA
TGTCTATGCCCTTGAGCATGACTTCTGCTCTCCCACTGGGGAGCCTGCCA
CCTGGGCGATTGGATATCCCAAGTACTGGGGTCAGGAAGCAGCGAAGATC
CAACTAGAGGGGCAGGCAAATGCGCTTGCTCTTAGCCCTGATAGCAAGAT
TATTGCCGTGGGGATTGACACCGAGATCCATATCTTTGATGCGGATACGC
GGAAACGTATTGAGGTGTTGAGAGGACACACGGGCACCGTGGAGAAGGTG
AAGTTCGCTCCAGAAATTATCAATACCGTGGATTCAGAAGACACCCGGTA
CATCCTGGTGTCGACAGGCGAGGAACTTGAAGAGAGTGATGGAGATAGTG
ACCGCCATGAGGGATGTGATTTCGGGATCATCATCCTATGGGAGCTGGAC
GAGCGCGGGAGACTCCGACAAAAGAAAGAGAAGCCAGTTGACATTGACAC
CCTCACAAGCAGAACTCTCCAACCCCTTATGTCAGACCTAGTGTCCAACC
ACGGCTGGAAAAGCGAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCA
GACGGCAAGACATTGATCTATCTCAGCCAAAACGAAACAACCCAGCACGG
ACCTCGTGACCCTGCTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGA
CCCGGTCCCTCCGACACCGACTGCTCGGCCACACAGACGCCATAATGTGG
GCTGGGATGAGTCCAGACAATTCTCTAGTCGCGTCCATCGCATGGGATGG
CAGGGCACGAGTCTGGGACGCCAACTCCGGAGCCTGCATCCATGTACTGG
TTTCTGTGGACGGCCAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAG
TACCTCGCTGTGAGCCAGGGAAGCCCCAGGACATATATCCATGTCTACGA
CCTTCGAACAGGACAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGG
CACGCACCTTGGCTTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGA
GACGGCGGCACAGTGCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGAT
GCGATGGCGTCTGGCTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGA
TTCAAAGCGTACAGTTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACC
CAGGAAGGTACGGTGGAGACGTATGATATCGAAAGCAATCTCAAGCAGCA
GTTTACAAGACGTGCGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAA
TGGCTGTGTCAAGTGATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGG
GGTTTGAGACTATGGGGTCTTTAGATGAGGTGCATGAACCAAAGCACGTT
TCTCCAAAACTATGTCTATGCCCTTGAGCATGACTTCTGCTCTCCCACTG
GGGAGCCTGCCACCTGGGCGATTGGATATCCCAAGTACTGGGGTCAGGAA
GCAGCGAAGATCCAACTAGAGGGGCAGGCAAATGCGCTTGCTCTTAGCCC
TGATAGCAAGATTATTGCCGTGGGGATTGACACCGAGATCCATATCTTTG
ATGCGGATACGCGGAAACGTATTGAGGTGTTGAGAGGACACACGGGCACC
GTGGAGAAGGTGAAGTTCGCTCCAGAAATTATCAATACCGTGGATTCAGA
AGACACCCGGTACATCCTGGTGTCGACAGGCGAGGAACTTGAAGAGAGTG
ATGGAGATAGTGACCGCCATGAGGGATGTGATTTCGGGATCATCATCCTA
TGGGAGCTGGACGAGCGCGGGAGACTCCGACAAAAGAAAGAGAAGCCAGT
TGACATTGACACCCTCACAAGCAGAACTCTCCAACCCCTTATGTCAGACC
TAGTGTCCAACCACGGCTGGAAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000221.7 |
| Note | SMCOG1173:WD-40 repeat-containing protein |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR011659 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2870541..2872000 - |
|
