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CAN33_46805-T1, CAN33_46805-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46805-T1
Unique NameCAN33_46805-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2877018..2877954-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46805-T1 ID=CAN33_46805-T1|Name=CAN33_46805-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=937bp|location=Sequence derived from alignment at NKJJ01000022.1:2877018..2877954- (Aspergillus niger FDAARGOS_311)
ATGGGTCAGTCAACGGCACAGCTCGGTTCGAGTCTGTGGGAGCCGGGTCG
TGCAGTTACCGGAGGTATGTTAAAGGTGGTTTATATGCTTTATGTTTACA
CGTACTAATGGTTGTAGTCCACCGCACCGTACCGATGCAGATTCAGATCG
TGAAGGACAAGTGGGATGCATCCAGCCGTGCCTCTCCCTTCCGCGCGTAC
TTGTATAACAATGTCGGCGAAGAAATGGCACCATTCTACCAGCCGGGTCC
GGAGGACGATGATACGAAATGGGAGGATGCGCTGCGGAAGCGGCCTGATT
CGGGATATGTGCCTGTGCTCGTCAAGGGCTTCTTCGAGCTGGGCAAGCGC
GCGCAGCGCCAGAAGGACTTCCTCACCATGATGCAGACGCGACTGCACGA
GATCAACAACTGCCTGTCTGATCTACTGTCTCGGCACGATCTGAAGATTT
CGGTCAAAATTGCCGACTGCCGCCGGAAACACCTCGTCCTCAGCAAGCGG
TGTCTGGCGCTTGCGGCTAAGACGCAGGTGCTGCGGAATCGGGGCTACGC
CATGGATGACGCGGAGGAGGAGCTGAAGAAAAAGCTCAGTCAGCTGGAGC
GGTCGGTCTTTGACCCGTCACTGAACGGACGAGCGGAGGAGATCTGGGCG
CGCATGCTGGCTATCCGGGAGCATTCTCGGCGTCTACAGCAGGAGATGGA
GCGGGCCGGGCCCGGCGCGGCGGCGCAGGCGGACGACGAGCTGGACGAGC
AGACGATGAAGACGGCCAAGAAGGTGAGTTGCTTACTTCCAGTCATGACC
TCTACACATGCTAATGATGTCGTTAGATATTGGATGACTACCACACGCAA
ATCCAACACTTGCAGAAGGAACTCGAAGCAGTGAGAAAGGACTTTGAGGA
GGCACAGAAGCTTCCCGGGGGTGCCGTGAACCACTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2877018..2877954-

>CAN33_46805-T1 ID=CAN33_46805-T1|Name=CAN33_46805-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2493bp|location=Sequence derived from alignment at NKJJ01000022.1:2877018..2877954- (Aspergillus niger FDAARGOS_311)
ATATTGGATGACTACCACACGCAAATCCAACACTTGCAGAAGGAACTCGA
AGCAGTGAGAAAGGACTTTGAGGAGGCACAGAAGCTTCCCGGGGGTGCCG
TGAACCACTGATCCACCGCACCGTACCGATGCAGATTCAGATCGTGAAGG
ACAAGTGGGATGCATCCAGCCGTGCCTCTCCCTTCCGCGCGTACTTGTAT
AACAATGTCGGCGAAGAAATGGCACCATTCTACCAGCCGGGTCCGGAGGA
CGATGATACGAAATGGGAGGATGCGCTGCGGAAGCGGCCTGATTCGGGAT
ATGTGCCTGTGCTCGTCAAGGGCTTCTTCGAGCTGGGCAAGCGCGCGCAG
CGCCAGAAGGACTTCCTCACCATGATGCAGACGCGACTGCACGAGATCAA
CAACTGCCTGTCTGATCTACTGTCTCGGCACGATCTGAAGATTTCGGTCA
AAATTGCCGACTGCCGCCGGAAACACCTCGTCCTCAGCAAGCGGTGTCTG
GCGCTTGCGGCTAAGACGCAGGTGCTGCGGAATCGGGGCTACGCCATGGA
TGACGCGGAGGAGGAGCTGAAGAAAAAGCTCAGTCAGCTGGAGCGGTCGG
TCTTTGACCCGTCACTGAACGGACGAGCGGAGGAGATCTGGGCGCGCATG
CTGGCTATCCGGGAGCATTCTCGGCGTCTACAGCAGGAGATGGAGCGGGC
CGGGCCCGGCGCGGCGGCGCAGGCGGACGACGAGCTGGACGAGCAGACGA
TGAAGACGGCCAAGAAGATGGGTCAGTCAACGGCACAGCTCGGTTCGAGT
CTGTGGGAGCCGGGTCGTGCAGTTACCGGAGATATTGGATGACTACCACA
CGCAAATCCAACACTTGCAGAAGGAACTCGAAGCAGTGAGAAAGGACTTT
GAGGAGGCACAGAAGCTTCCCGGGGGTGCCGTGAACCACTGATCCACCGC
ACCGTACCGATGCAGATTCAGATCGTGAAGGACAAGTGGGATGCATCCAG
CCGTGCCTCTCCCTTCCGCGCGTACTTGTATAACAATGTCGGCGAAGAAA
TGGCACCATTCTACCAGCCGGGTCCGGAGGACGATGATACGAAATGGGAG
GATGCGCTGCGGAAGCGGCCTGATTCGGGATATGTGCCTGTGCTCGTCAA
GGGCTTCTTCGAGCTGGGCAAGCGCGCGCAGCGCCAGAAGGACTTCCTCA
CCATGATGCAGACGCGACTGCACGAGATCAACAACTGCCTGTCTGATCTA
CTGTCTCGGCACGATCTGAAGATTTCGGTCAAAATTGCCGACTGCCGCCG
GAAACACCTCGTCCTCAGCAAGCGGTGTCTGGCGCTTGCGGCTAAGACGC
AGGTGCTGCGGAATCGGGGCTACGCCATGGATGACGCGGAGGAGGAGCTG
AAGAAAAAGCTCAGTCAGCTGGAGCGGTCGGTCTTTGACCCGTCACTGAA
CGGACGAGCGGAGGAGATCTGGGCGCGCATGCTGGCTATCCGGGAGCATT
CTCGGCGTCTACAGCAGGAGATGGAGCGGGCCGGGCCCGGCGCGGCGGCG
CAGGCGGACGACGAGCTGGACGAGCAGACGATGAAGACGGCCAAGAAGAT
GGGTCAGTCAACGGCACAGCTCGGTTCGAGTCTGTGGGAGCCGGGTCGTG
CAGTTACCGGAGATATTGGATGACTACCACACGCAAATCCAACACTTGCA
GAAGGAACTCGAAGCAGTGAGAAAGGACTTTGAGGAGGCACAGAAGCTTC
CCGGGGGTGCCGTGAACCACTGATCCACCGCACCGTACCGATGCAGATTC
AGATCGTGAAGGACAAGTGGGATGCATCCAGCCGTGCCTCTCCCTTCCGC
GCGTACTTGTATAACAATGTCGGCGAAGAAATGGCACCATTCTACCAGCC
GGGTCCGGAGGACGATGATACGAAATGGGAGGATGCGCTGCGGAAGCGGC
CTGATTCGGGATATGTGCCTGTGCTCGTCAAGGGCTTCTTCGAGCTGGGC
AAGCGCGCGCAGCGCCAGAAGGACTTCCTCACCATGATGCAGACGCGACT
GCACGAGATCAACAACTGCCTGTCTGATCTACTGTCTCGGCACGATCTGA
AGATTTCGGTCAAAATTGCCGACTGCCGCCGGAAACACCTCGTCCTCAGC
AAGCGGTGTCTGGCGCTTGCGGCTAAGACGCAGGTGCTGCGGAATCGGGG
CTACGCCATGGATGACGCGGAGGAGGAGCTGAAGAAAAAGCTCAGTCAGC
TGGAGCGGTCGGTCTTTGACCCGTCACTGAACGGACGAGCGGAGGAGATC
TGGGCGCGCATGCTGGCTATCCGGGAGCATTCTCGGCGTCTACAGCAGGA
GATGGAGCGGGCCGGGCCCGGCGCGGCGGCGCAGGCGGACGACGAGCTGG
ACGAGCAGACGATGAAGACGGCCAAGAAGATGGGTCAGTCAACGGCACAG
CTCGGTTCGAGTCTGTGGGAGCCGGGTCGTGCAGTTACCGGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46805CAN33_46805Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46805-T1CAN33_46805-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46805-T1.cdsCAN33_46805-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46805-T1.exon3CAN33_46805-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46805-T1.exon2CAN33_46805-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46805-T1.exon1CAN33_46805-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR025712
DBxrefPFAM:PF18570
DBxrefPFAM:PF13874
ProductNucleoporin complex subunit 54 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2877018..2877954 -
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