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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2939454..2941219- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46885-T1 ID=CAN33_46885-T1|Name=CAN33_46885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1766bp|location=Sequence derived from alignment at NKJJ01000022.1:2939454..2941219- (Aspergillus niger FDAARGOS_311)
ATGACCATCAAATCGTCTTCGACGAGGGTGCTGGTGGACTCTCCGGTGAG
CACGATTCGCAGCTATGTGTGCTGTCGTTGTTTTAACATCTACTGACTAT
GTTAGATTACGCTGCAAGGCAAATACTTCGTGGACCGCATCGAAATGCGA
GCAAAGAACATTGTTTTCACTTTTGGAGGCGGGAAGCATGCGTCTTTGCC
AGTTGGATTCAGGGAGGCAATAGAGGCCGAGGAAGAGGATAGTCGGCCAT
TCATCTATTGCTTTCCGCCACCGGACGGCCTTCAGGCAAAAATTGTGTCA
CCGCACTTTGTCAATCTGGAGGAATTACGGACGATAGAGCTCGAATTCAG
TAGTGGATGGAACGACATCAAAAGCGGGACTCTTCGAGTAAGACCTGCCA
CGGCTGGTCTTCGATTGAGAACTACCGAAACCGAACTGGTAGAGGGCGAT
ATAAAGATCGAAGCCCATAGTGACTCGGGAAACATTGAGTTCTCTCAGTT
GAAACCCAACTCGTTTGTTCGGTTCCGGATCCCTTACACGGTCGAGGAAC
ACCACCCGATGCTCTCTGCAAGGGCCGAAGTGGCATACGAGACAGAGAAG
GGACGGTTTACTTACTCCTCGGTGCACAACATTATTTCAGGCTTGCCAAT
CAGTGTCAACGTGCAGGATGTCTTCAAGGATAGTGTGCTATTCTCACGAT
TCACCATCAGTCCAGCCATGCTGATTCCGCTCCGGATCTTAAAGTGCCAA
ATCCCAAGCTCAGACATCTATGAAGTGCAGTCAAGTATTGGCGACTCTGT
GGCGCTGAATGTATTTGCCAAACAGCCAGCGTCCTTACTCTACAAGATTC
GGCAGCGGCCAGACAGCGTTCCCACTCCGGGAGCAAGACGGTCCCTGCGA
TTAAGCGTCGATTTTACTTGCGTCGACGATGAATGCCTACATGCAGTCGA
GCAGACATTCAAGTCAAGCATTGCAGCTAGCGAGTTTCATCAGTACACGA
GTTTGCTCACATCCCACATTGTTGAGACCTTCCGCTCACAGCTGTCGACC
TCCGACATGGAAGTTGTCGGCCTCGTCCGGGAGGTGGAAACACTGCAGTA
TGCGAATGCCCACTGGGAGACATTGCTGAGTGCGTTGAAGGAACCAATGG
ATGGACTGAAGGCCTGGCTGATGGACTGGCATAAGGTAAGTCACTCGTAT
AACCCACCGATGGCCCCCTTGCCTCTTTAGTCTAACCCAAATAGAACCAC
CCGGTCATCTGTCTTCCAGACTCTCCAGCCGTACGCAGCAGACACATCGT
CATCCCCGTCGACATCCCGGAGATTCAAGTTGTGCACACAGCCGAGCTCC
GCCTCGCCAATCTATCACAGCAGCCTCCCCATGCGGCAGTTGGACAGATG
ATTGCTGCAGAACTCAGCATACGTCATACACGACGGTGGTGCTCACCGGA
GCATCGCGAGAACGCAGGTGGTCCGCTTGACTTCTCGTACGAGATCCACG
CAAATCCCGAAACATGGCTCGTTGGTGGCCGACGCCGCGGAAACTTCACC
GCCGAAGAGGGCGAGACCAAAACCTTTGCAATCATGCTCCTTCCGCAGAA
AGCCGGACACCTTCTTCTTCCGGGGTTGGAAATCAGGTCCTTTGTGCCAC
CATCCCCAACATCCTCATCGTCTCTGTCACAGCCGCAGTCGCAATCTTCA
ACGACTGCGAGCGGGGGGCAGATGATGAGTCCAACCCTGGACAGCCTGCG
GCAGTTGGGTCCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2939454..2941219- >CAN33_46885-T1 ID=CAN33_46885-T1|Name=CAN33_46885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4941bp|location=Sequence derived from alignment at NKJJ01000022.1:2939454..2941219- (Aspergillus niger FDAARGOS_311)
AACCACCCGGTCATCTGTCTTCCAGACTCTCCAGCCGTACGCAGCAGACA
CATCGTCATCCCCGTCGACATCCCGGAGATTCAAGTTGTGCACACAGCCG
AGCTCCGCCTCGCCAATCTATCACAGCAGCCTCCCCATGCGGCAGTTGGA
CAGATGATTGCTGCAGAACTCAGCATACGTCATACACGACGGTGGTGCTC
ACCGGAGCATCGCGAGAACGCAGGTGGTCCGCTTGACTTCTCGTACGAGA
TCCACGCAAATCCCGAAACATGGCTCGTTGGTGGCCGACGCCGCGGAAAC
TTCACCGCCGAAGAGGGCGAGACCAAAACCTTTGCAATCATGCTCCTTCC
GCAGAAAGCCGGACACCTTCTTCTTCCGGGGTTGGAAATCAGGTCCTTTG
TGCCACCATCCCCAACATCCTCATCGTCTCTGTCACAGCCGCAGTCGCAA
TCTTCAACGACTGCGAGCGGGGGGCAGATGATGAGTCCAACCCTGGACAG
CCTGCGGCAGTTGGGTCCATGAATTACGCTGCAAGGCAAATACTTCGTGG
ACCGCATCGAAATGCGAGCAAAGAACATTGTTTTCACTTTTGGAGGCGGG
AAGCATGCGTCTTTGCCAGTTGGATTCAGGGAGGCAATAGAGGCCGAGGA
AGAGGATAGTCGGCCATTCATCTATTGCTTTCCGCCACCGGACGGCCTTC
AGGCAAAAATTGTGTCACCGCACTTTGTCAATCTGGAGGAATTACGGACG
ATAGAGCTCGAATTCAGTAGTGGATGGAACGACATCAAAAGCGGGACTCT
TCGAGTAAGACCTGCCACGGCTGGTCTTCGATTGAGAACTACCGAAACCG
AACTGGTAGAGGGCGATATAAAGATCGAAGCCCATAGTGACTCGGGAAAC
ATTGAGTTCTCTCAGTTGAAACCCAACTCGTTTGTTCGGTTCCGGATCCC
TTACACGGTCGAGGAACACCACCCGATGCTCTCTGCAAGGGCCGAAGTGG
CATACGAGACAGAGAAGGGACGGTTTACTTACTCCTCGGTGCACAACATT
ATTTCAGGCTTGCCAATCAGTGTCAACGTGCAGGATGTCTTCAAGGATAG
TGTGCTATTCTCACGATTCACCATCAGTCCAGCCATGCTGATTCCGCTCC
GGATCTTAAAGTGCCAAATCCCAAGCTCAGACATCTATGAAGTGCAGTCA
AGTATTGGCGACTCTGTGGCGCTGAATGTATTTGCCAAACAGCCAGCGTC
CTTACTCTACAAGATTCGGCAGCGGCCAGACAGCGTTCCCACTCCGGGAG
CAAGACGGTCCCTGCGATTAAGCGTCGATTTTACTTGCGTCGACGATGAA
TGCCTACATGCAGTCGAGCAGACATTCAAGTCAAGCATTGCAGCTAGCGA
GTTTCATCAGTACACGAGTTTGCTCACATCCCACATTGTTGAGACCTTCC
GCTCACAGCTGTCGACCTCCGACATGGAAGTTGTCGGCCTCGTCCGGGAG
GTGGAAACACTGCAGTATGCGAATGCCCACTGGGAGACATTGCTGAGTGC
GTTGAAGGAACCAATGGATGGACTGAAGGCCTGGCTGATGGACTGGCATA
AGATGACCATCAAATCGTCTTCGACGAGGGTGCTGGTGGACTCTCCGAAC
CACCCGGTCATCTGTCTTCCAGACTCTCCAGCCGTACGCAGCAGACACAT
CGTCATCCCCGTCGACATCCCGGAGATTCAAGTTGTGCACACAGCCGAGC
TCCGCCTCGCCAATCTATCACAGCAGCCTCCCCATGCGGCAGTTGGACAG
ATGATTGCTGCAGAACTCAGCATACGTCATACACGACGGTGGTGCTCACC
GGAGCATCGCGAGAACGCAGGTGGTCCGCTTGACTTCTCGTACGAGATCC
ACGCAAATCCCGAAACATGGCTCGTTGGTGGCCGACGCCGCGGAAACTTC
ACCGCCGAAGAGGGCGAGACCAAAACCTTTGCAATCATGCTCCTTCCGCA
GAAAGCCGGACACCTTCTTCTTCCGGGGTTGGAAATCAGGTCCTTTGTGC
CACCATCCCCAACATCCTCATCGTCTCTGTCACAGCCGCAGTCGCAATCT
TCAACGACTGCGAGCGGGGGGCAGATGATGAGTCCAACCCTGGACAGCCT
GCGGCAGTTGGGTCCATGAATTACGCTGCAAGGCAAATACTTCGTGGACC
GCATCGAAATGCGAGCAAAGAACATTGTTTTCACTTTTGGAGGCGGGAAG
CATGCGTCTTTGCCAGTTGGATTCAGGGAGGCAATAGAGGCCGAGGAAGA
GGATAGTCGGCCATTCATCTATTGCTTTCCGCCACCGGACGGCCTTCAGG
CAAAAATTGTGTCACCGCACTTTGTCAATCTGGAGGAATTACGGACGATA
GAGCTCGAATTCAGTAGTGGATGGAACGACATCAAAAGCGGGACTCTTCG
AGTAAGACCTGCCACGGCTGGTCTTCGATTGAGAACTACCGAAACCGAAC
TGGTAGAGGGCGATATAAAGATCGAAGCCCATAGTGACTCGGGAAACATT
GAGTTCTCTCAGTTGAAACCCAACTCGTTTGTTCGGTTCCGGATCCCTTA
CACGGTCGAGGAACACCACCCGATGCTCTCTGCAAGGGCCGAAGTGGCAT
ACGAGACAGAGAAGGGACGGTTTACTTACTCCTCGGTGCACAACATTATT
TCAGGCTTGCCAATCAGTGTCAACGTGCAGGATGTCTTCAAGGATAGTGT
GCTATTCTCACGATTCACCATCAGTCCAGCCATGCTGATTCCGCTCCGGA
TCTTAAAGTGCCAAATCCCAAGCTCAGACATCTATGAAGTGCAGTCAAGT
ATTGGCGACTCTGTGGCGCTGAATGTATTTGCCAAACAGCCAGCGTCCTT
ACTCTACAAGATTCGGCAGCGGCCAGACAGCGTTCCCACTCCGGGAGCAA
GACGGTCCCTGCGATTAAGCGTCGATTTTACTTGCGTCGACGATGAATGC
CTACATGCAGTCGAGCAGACATTCAAGTCAAGCATTGCAGCTAGCGAGTT
TCATCAGTACACGAGTTTGCTCACATCCCACATTGTTGAGACCTTCCGCT
CACAGCTGTCGACCTCCGACATGGAAGTTGTCGGCCTCGTCCGGGAGGTG
GAAACACTGCAGTATGCGAATGCCCACTGGGAGACATTGCTGAGTGCGTT
GAAGGAACCAATGGATGGACTGAAGGCCTGGCTGATGGACTGGCATAAGA
TGACCATCAAATCGTCTTCGACGAGGGTGCTGGTGGACTCTCCGAACCAC
CCGGTCATCTGTCTTCCAGACTCTCCAGCCGTACGCAGCAGACACATCGT
CATCCCCGTCGACATCCCGGAGATTCAAGTTGTGCACACAGCCGAGCTCC
GCCTCGCCAATCTATCACAGCAGCCTCCCCATGCGGCAGTTGGACAGATG
ATTGCTGCAGAACTCAGCATACGTCATACACGACGGTGGTGCTCACCGGA
GCATCGCGAGAACGCAGGTGGTCCGCTTGACTTCTCGTACGAGATCCACG
CAAATCCCGAAACATGGCTCGTTGGTGGCCGACGCCGCGGAAACTTCACC
GCCGAAGAGGGCGAGACCAAAACCTTTGCAATCATGCTCCTTCCGCAGAA
AGCCGGACACCTTCTTCTTCCGGGGTTGGAAATCAGGTCCTTTGTGCCAC
CATCCCCAACATCCTCATCGTCTCTGTCACAGCCGCAGTCGCAATCTTCA
ACGACTGCGAGCGGGGGGCAGATGATGAGTCCAACCCTGGACAGCCTGCG
GCAGTTGGGTCCATGAATTACGCTGCAAGGCAAATACTTCGTGGACCGCA
TCGAAATGCGAGCAAAGAACATTGTTTTCACTTTTGGAGGCGGGAAGCAT
GCGTCTTTGCCAGTTGGATTCAGGGAGGCAATAGAGGCCGAGGAAGAGGA
TAGTCGGCCATTCATCTATTGCTTTCCGCCACCGGACGGCCTTCAGGCAA
AAATTGTGTCACCGCACTTTGTCAATCTGGAGGAATTACGGACGATAGAG
CTCGAATTCAGTAGTGGATGGAACGACATCAAAAGCGGGACTCTTCGAGT
AAGACCTGCCACGGCTGGTCTTCGATTGAGAACTACCGAAACCGAACTGG
TAGAGGGCGATATAAAGATCGAAGCCCATAGTGACTCGGGAAACATTGAG
TTCTCTCAGTTGAAACCCAACTCGTTTGTTCGGTTCCGGATCCCTTACAC
GGTCGAGGAACACCACCCGATGCTCTCTGCAAGGGCCGAAGTGGCATACG
AGACAGAGAAGGGACGGTTTACTTACTCCTCGGTGCACAACATTATTTCA
GGCTTGCCAATCAGTGTCAACGTGCAGGATGTCTTCAAGGATAGTGTGCT
ATTCTCACGATTCACCATCAGTCCAGCCATGCTGATTCCGCTCCGGATCT
TAAAGTGCCAAATCCCAAGCTCAGACATCTATGAAGTGCAGTCAAGTATT
GGCGACTCTGTGGCGCTGAATGTATTTGCCAAACAGCCAGCGTCCTTACT
CTACAAGATTCGGCAGCGGCCAGACAGCGTTCCCACTCCGGGAGCAAGAC
GGTCCCTGCGATTAAGCGTCGATTTTACTTGCGTCGACGATGAATGCCTA
CATGCAGTCGAGCAGACATTCAAGTCAAGCATTGCAGCTAGCGAGTTTCA
TCAGTACACGAGTTTGCTCACATCCCACATTGTTGAGACCTTCCGCTCAC
AGCTGTCGACCTCCGACATGGAAGTTGTCGGCCTCGTCCGGGAGGTGGAA
ACACTGCAGTATGCGAATGCCCACTGGGAGACATTGCTGAGTGCGTTGAA
GGAACCAATGGATGGACTGAAGGCCTGGCTGATGGACTGGCATAAGATGA
CCATCAAATCGTCTTCGACGAGGGTGCTGGTGGACTCTCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| DBxref | InterPro:IPR022233 |
| DBxref | PFAM:PF12584 |
| Product | Trafficking protein particle complex subunit 10 TRAPPC10 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2939454..2941219 - |
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