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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2956469..2958593+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46910-T1 ID=CAN33_46910-T1|Name=CAN33_46910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2125bp|location=Sequence derived from alignment at NKJJ01000022.1:2956469..2958593+ (Aspergillus niger FDAARGOS_311)
ATGTTCAAGAAGAAGCCCACGGTACGTTACCCCTCCCCGCACCACTCTGG
GATCGGTCACAACACAGCAAGGTCAATCGTGCCTTTAGAGCTCATTACTC
ACGCTAGCCAAACGCAGATCAAGAACCTTTCTCCCCTGCGGTCTTCCGAC
CGTCGGAAGATTGCCGATCAGATAATCAGAGATTACAAGATCGAGGTCCC
GCAAAGTGCGCCAGTTGAAACCAGCGGCGACGACTCAGCTCCAGGCGCAT
CCAACCCAACGGCGCCAAACCTCACCTCCATCCGAAATACCTTACTTCCC
GAGGATTGCTTGACAGCACGCTTTACTACGACCGCCGGGCCCCAGCTTCG
CGAAGTACAAGGGACAGTGTATGTTGGAACACATCCGGGGCCGATGAAAG
GATCCTGTGGTTCAGAGTCGACCATGGGCCCGGCGCCGATGGACGCCTCT
ACCCTACGGTATATACACTTTGGCACAACCCAGATCTGGTGCCACTGCTC
CATACTCCACAAATGGTCATGCAGAAACTGCACGGAGGAGCAGACCTGAT
GACTCCGGGTCTGGCCAATGACCCGCCTTTCGACGAGCGTGCCGTCAAGG
GCGCAGTGGTTGCTGTCGCTAGTCTGAACAGGCATACGGTACCACTGTTT
GTGGGCGTGTGTGAGATTGACATCTCTGCACTTGGAGAGGTTCAGGGTAC
GAAGGGACATGCCGTTCGGGGTCTGCACTGGGAAGGCGATGAGTTGTGGG
CTTGGAGCTCGTCTTCCAAGCCGGGTCAGCCCGCTCCAGAATATCTAGAT
GGGTGGGATGATGAACTGGAAGAGGACGAAGATGTAGGAGAGATTGAAGA
GGGCGTGCAGGGCCTAGCAGTAGGAGGTGACAATGCAGTTCAAGCAACTG
AAGGCGAGGAAGCATCAGATGAAGCGCCTGATGTCCCGCAGGAGGAGGCA
CCTGAAGTTGAAGAGAAGGAGCCCACAACCAAAGGTGAGTCTCGCTCACT
ACAACATGAGTGTAGCTATACTGACCGCTTGAAGAAATTGACGAGGCTTT
CGAAAAGGCCTTCCTCTACTCCCTCTACAAGCTCAAGCAAGATAATCCAT
CTGCTACCAACCACGGTCTATCTCTACCCGTCCAACCATCTGCTCTGATA
TCAAACATGATCACACCCCACCTGCCCATATACACTGCCAAACAAGCCCA
ATACTATCAAATCAAGAAGACCAGCTGGAAAAATGTGAAAAAGTTCATCA
AATATCTGGACAAGCAGCGCCTGGTCAAGTCCAAAGACCGCAACGGCCAA
GAGACCGTCATCCTCGACGTGGACTTCAACGACCATCGTGTTGAACAGTT
CATCCCTTACAGACTCCCATCCAAAAACACCGTTGAGAACGCAGGAAAGC
CTGCCACTCAGGCAAATAACGCCAAAACCGCATCTACACAGAGCGGTGAC
CCCTCAGTCGGCCAAACCCTGACCGTGCAGACTGTATATCGCCCAACCAA
CAAACTCACGCCGACCATCTTCCCTGCTCTATCCAGCACCCACCCCAGCA
ACTACTACAAGTACACCGACATCTCCACTCACCTCGACCAATACATCCAA
TCTCAAAATCCCCCGCTCGCCGACCCCAAAAACAAACGCATTATCACCCT
CAACCCCTACCTCGCCAATACCATCTTCACCTCTTCCTCCGCCGATGACA
AAAGCACTCTCGCCCGCGGCAAGACCACCCGCGACGGCCTCCTCAAGCGT
CTCATCGATGACCACTCCCTCATGACAGCCCACTACGTCATCCTACGGCC
CGGTCAAACCCTCTCCGACGTGAAGCCCAAAGCAGGCGCCGCCCCCAAGG
TCAACGTAATTCTCGAACGCCGCACCGGCTCCAAGACCGTCACCAAGGTC
TGGAACCTCGAAGTGTTCGGCATCATCCCTAGTCTTCTGGCCGAAGAGCT
GCAGAAGAAGTGTGCTAGCAGCACCAGCGTGACGCAGGCTACTGGCGCGC
CGAAGGGCGTTATGGAGGTGCTTGTCCAGGGAGACCAGCGACGCGCGTTA
GAGACGGCGTTGGTGAGACGTGGGTTGAGGACGCAGTGGATTGATGTTGT
GGATAAGACGAAGAAGAAGAAATAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2956469..2958593+ >CAN33_46910-T1 ID=CAN33_46910-T1|Name=CAN33_46910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7728bp|location=Sequence derived from alignment at NKJJ01000022.1:2956469..2958593+ (Aspergillus niger FDAARGOS_311)
ATGTTCAAGAAGAAGCCCACGATCAAGAACCTTTCTCCCCTGCGGTCTTC
CGACCGTCGGAAGATTGCCGATCAGATAATCAGAGATTACAAGATCGAGG
TCCCGCAAAGTGCGCCAGTTGAAACCAGCGGCGACGACTCAGCTCCAGGC
GCATCCAACCCAACGGCGCCAAACCTCACCTCCATCCGAAATACCTTACT
TCCCGAGGATTGCTTGACAGCACGCTTTACTACGACCGCCGGGCCCCAGC
TTCGCGAAGTACAAGGGACAGTAGTCGACCATGGGCCCGGCGCCGATGGA
CGCCTCTACCCTACGGTATATACACTTTGGCACAACCCAGATCTGGTGCC
ACTGCTCCATACTCCACAAATGGTCATGCAGAAACTGCACGGAGGAGCAG
ACCTGATGACTCCGGGTCTGGCCAATGACCCGCCTTTCGACGAGCGTGCC
GTCAAGGGCGCAGTGGTTGCTGTCGCTAGTCTGAACAGGCATACGGTACC
ACTGTTTGTGGGCGTGTGTGAGATTGACATCTCTGCACTTGGAGAGGTTC
AGGGTACGAAGGGACATGCCGTTCGGGGTCTGCACTGGGAAGGCGATGAG
TTGTGGGCTTGGAGCTCGTCTTCCAAGCCGGGTCAGCCCGCTCCAGAATA
TCTAGATGGGTGGGATGATGAACTGGAAGAGGACGAAGATGTAGGAGAGA
TTGAAGAGGGCGTGCAGGGCCTAGCAGTAGGAGGTGACAATGCAGTTCAA
GCAACTGAAGGCGAGGAAGCATCAGATGAAGCGCCTGATGTCCCGCAGGA
GGAGGCACCTGAAGTTGAAGAGAAGGAGCCCACAACCAAAGAAATTGACG
AGGCTTTCGAAAAGGCCTTCCTCTACTCCCTCTACAAGCTCAAGCAAGAT
AATCCATCTGCTACCAACCACGGTCTATCTCTACCCGTCCAACCATCTGC
TCTGATATCAAACATGATCACACCCCACCTGCCCATATACACTGCCAAAC
AAGCCCAATACTATCAAATCAAGAAGACCAGCTGGAAAAATGTGAAAAAG
TTCATCAAATATCTGGACAAGCAGCGCCTGGTCAAGTCCAAAGACCGCAA
CGGCCAAGAGACCGTCATCCTCGACGTGGACTTCAACGACCATCGTGTTG
AACAGTTCATCCCTTACAGACTCCCATCCAAAAACACCGTTGAGAACGCA
GGAAAGCCTGCCACTCAGGCAAATAACGCCAAAACCGCATCTACACAGAG
CGGTGACCCCTCAGTCGGCCAAACCCTGACCGTGCAGACTGTATATCGCC
CAACCAACAAACTCACGCCGACCATCTTCCCTGCTCTATCCAGCACCCAC
CCCAGCAACTACTACAAGTACACCGACATCTCCACTCACCTCGACCAATA
CATCCAATCTCAAAATCCCCCGCTCGCCGACCCCAAAAACAAACGCATTA
TCACCCTCAACCCCTACCTCGCCAATACCATCTTCACCTCTTCCTCCGCC
GATGACAAAAGCACTCTCGCCCGCGGCAAGACCACCCGCGACGGCCTCCT
CAAGCGTCTCATCGATGACCACTCCCTCATGACAGCCCACTACGTCATCC
TACGGCCCGGTCAAACCCTCTCCGACGTGAAGCCCAAAGCAGGCGCCGCC
CCCAAGGTCAACGTAATTCTCGAACGCCGCACCGGCTCCAAGACCGTCAC
CAAGGTCTGGAACCTCGAAGTGTTCGGCATCATCCCTAGTCTTCTGGCCG
AAGAGCTGCAGAAGAAGTGTGCTAGCAGCACCAGCGTGACGCAGGCTACT
GGCGCGCCGAAGGGCGTTATGGAGGTGCTTGTCCAGGGAGACCAGCGACG
CGCGTTAGAGACGGCGTTGGTGAGACGTGGGTTGAGGACGCAGTGGATTG
ATGTTGTGGATAAGACGAAGAAGAAGAAATAAATGTTCAAGAAGAAGCCC
ACGATCAAGAACCTTTCTCCCCTGCGGTCTTCCGACCGTCGGAAGATTGC
CGATCAGATAATCAGAGATTACAAGATCGAGGTCCCGCAAAGTGCGCCAG
TTGAAACCAGCGGCGACGACTCAGCTCCAGGCGCATCCAACCCAACGGCG
CCAAACCTCACCTCCATCCGAAATACCTTACTTCCCGAGGATTGCTTGAC
AGCACGCTTTACTACGACCGCCGGGCCCCAGCTTCGCGAAGTACAAGGGA
CAGTAGTCGACCATGGGCCCGGCGCCGATGGACGCCTCTACCCTACGGTA
TATACACTTTGGCACAACCCAGATCTGGTGCCACTGCTCCATACTCCACA
AATGGTCATGCAGAAACTGCACGGAGGAGCAGACCTGATGACTCCGGGTC
TGGCCAATGACCCGCCTTTCGACGAGCGTGCCGTCAAGGGCGCAGTGGTT
GCTGTCGCTAGTCTGAACAGGCATACGGTACCACTGTTTGTGGGCGTGTG
TGAGATTGACATCTCTGCACTTGGAGAGGTTCAGGGTACGAAGGGACATG
CCGTTCGGGGTCTGCACTGGGAAGGCGATGAGTTGTGGGCTTGGAGCTCG
TCTTCCAAGCCGGGTCAGCCCGCTCCAGAATATCTAGATGGGTGGGATGA
TGAACTGGAAGAGGACGAAGATGTAGGAGAGATTGAAGAGGGCGTGCAGG
GCCTAGCAGTAGGAGGTGACAATGCAGTTCAAGCAACTGAAGGCGAGGAA
GCATCAGATGAAGCGCCTGATGTCCCGCAGGAGGAGGCACCTGAAGTTGA
AGAGAAGGAGCCCACAACCAAAGAAATTGACGAGGCTTTCGAAAAGGCCT
TCCTCTACTCCCTCTACAAGCTCAAGCAAGATAATCCATCTGCTACCAAC
CACGGTCTATCTCTACCCGTCCAACCATCTGCTCTGATATCAAACATGAT
CACACCCCACCTGCCCATATACACTGCCAAACAAGCCCAATACTATCAAA
TCAAGAAGACCAGCTGGAAAAATGTGAAAAAGTTCATCAAATATCTGGAC
AAGCAGCGCCTGGTCAAGTCCAAAGACCGCAACGGCCAAGAGACCGTCAT
CCTCGACGTGGACTTCAACGACCATCGTGTTGAACAGTTCATCCCTTACA
GACTCCCATCCAAAAACACCGTTGAGAACGCAGGAAAGCCTGCCACTCAG
GCAAATAACGCCAAAACCGCATCTACACAGAGCGGTGACCCCTCAGTCGG
CCAAACCCTGACCGTGCAGACTGTATATCGCCCAACCAACAAACTCACGC
CGACCATCTTCCCTGCTCTATCCAGCACCCACCCCAGCAACTACTACAAG
TACACCGACATCTCCACTCACCTCGACCAATACATCCAATCTCAAAATCC
CCCGCTCGCCGACCCCAAAAACAAACGCATTATCACCCTCAACCCCTACC
TCGCCAATACCATCTTCACCTCTTCCTCCGCCGATGACAAAAGCACTCTC
GCCCGCGGCAAGACCACCCGCGACGGCCTCCTCAAGCGTCTCATCGATGA
CCACTCCCTCATGACAGCCCACTACGTCATCCTACGGCCCGGTCAAACCC
TCTCCGACGTGAAGCCCAAAGCAGGCGCCGCCCCCAAGGTCAACGTAATT
CTCGAACGCCGCACCGGCTCCAAGACCGTCACCAAGGTCTGGAACCTCGA
AGTGTTCGGCATCATCCCTAGTCTTCTGGCCGAAGAGCTGCAGAAGAAGT
GTGCTAGCAGCACCAGCGTGACGCAGGCTACTGGCGCGCCGAAGGGCGTT
ATGGAGGTGCTTGTCCAGGGAGACCAGCGACGCGCGTTAGAGACGGCGTT
GGTGAGACGTGGGTTGAGGACGCAGTGGATTGATGTTGTGGATAAGACGA
AGAAGAAGAAATAAATGTTCAAGAAGAAGCCCACGATCAAGAACCTTTCT
CCCCTGCGGTCTTCCGACCGTCGGAAGATTGCCGATCAGATAATCAGAGA
TTACAAGATCGAGGTCCCGCAAAGTGCGCCAGTTGAAACCAGCGGCGACG
ACTCAGCTCCAGGCGCATCCAACCCAACGGCGCCAAACCTCACCTCCATC
CGAAATACCTTACTTCCCGAGGATTGCTTGACAGCACGCTTTACTACGAC
CGCCGGGCCCCAGCTTCGCGAAGTACAAGGGACAGTAGTCGACCATGGGC
CCGGCGCCGATGGACGCCTCTACCCTACGGTATATACACTTTGGCACAAC
CCAGATCTGGTGCCACTGCTCCATACTCCACAAATGGTCATGCAGAAACT
GCACGGAGGAGCAGACCTGATGACTCCGGGTCTGGCCAATGACCCGCCTT
TCGACGAGCGTGCCGTCAAGGGCGCAGTGGTTGCTGTCGCTAGTCTGAAC
AGGCATACGGTACCACTGTTTGTGGGCGTGTGTGAGATTGACATCTCTGC
ACTTGGAGAGGTTCAGGGTACGAAGGGACATGCCGTTCGGGGTCTGCACT
GGGAAGGCGATGAGTTGTGGGCTTGGAGCTCGTCTTCCAAGCCGGGTCAG
CCCGCTCCAGAATATCTAGATGGGTGGGATGATGAACTGGAAGAGGACGA
AGATGTAGGAGAGATTGAAGAGGGCGTGCAGGGCCTAGCAGTAGGAGGTG
ACAATGCAGTTCAAGCAACTGAAGGCGAGGAAGCATCAGATGAAGCGCCT
GATGTCCCGCAGGAGGAGGCACCTGAAGTTGAAGAGAAGGAGCCCACAAC
CAAAGAAATTGACGAGGCTTTCGAAAAGGCCTTCCTCTACTCCCTCTACA
AGCTCAAGCAAGATAATCCATCTGCTACCAACCACGGTCTATCTCTACCC
GTCCAACCATCTGCTCTGATATCAAACATGATCACACCCCACCTGCCCAT
ATACACTGCCAAACAAGCCCAATACTATCAAATCAAGAAGACCAGCTGGA
AAAATGTGAAAAAGTTCATCAAATATCTGGACAAGCAGCGCCTGGTCAAG
TCCAAAGACCGCAACGGCCAAGAGACCGTCATCCTCGACGTGGACTTCAA
CGACCATCGTGTTGAACAGTTCATCCCTTACAGACTCCCATCCAAAAACA
CCGTTGAGAACGCAGGAAAGCCTGCCACTCAGGCAAATAACGCCAAAACC
GCATCTACACAGAGCGGTGACCCCTCAGTCGGCCAAACCCTGACCGTGCA
GACTGTATATCGCCCAACCAACAAACTCACGCCGACCATCTTCCCTGCTC
TATCCAGCACCCACCCCAGCAACTACTACAAGTACACCGACATCTCCACT
CACCTCGACCAATACATCCAATCTCAAAATCCCCCGCTCGCCGACCCCAA
AAACAAACGCATTATCACCCTCAACCCCTACCTCGCCAATACCATCTTCA
CCTCTTCCTCCGCCGATGACAAAAGCACTCTCGCCCGCGGCAAGACCACC
CGCGACGGCCTCCTCAAGCGTCTCATCGATGACCACTCCCTCATGACAGC
CCACTACGTCATCCTACGGCCCGGTCAAACCCTCTCCGACGTGAAGCCCA
AAGCAGGCGCCGCCCCCAAGGTCAACGTAATTCTCGAACGCCGCACCGGC
TCCAAGACCGTCACCAAGGTCTGGAACCTCGAAGTGTTCGGCATCATCCC
TAGTCTTCTGGCCGAAGAGCTGCAGAAGAAGTGTGCTAGCAGCACCAGCG
TGACGCAGGCTACTGGCGCGCCGAAGGGCGTTATGGAGGTGCTTGTCCAG
GGAGACCAGCGACGCGCGTTAGAGACGGCGTTGGTGAGACGTGGGTTGAG
GACGCAGTGGATTGATGTTGTGGATAAGACGAAGAAGAAGAAATAAATGT
TCAAGAAGAAGCCCACGATCAAGAACCTTTCTCCCCTGCGGTCTTCCGAC
CGTCGGAAGATTGCCGATCAGATAATCAGAGATTACAAGATCGAGGTCCC
GCAAAGTGCGCCAGTTGAAACCAGCGGCGACGACTCAGCTCCAGGCGCAT
CCAACCCAACGGCGCCAAACCTCACCTCCATCCGAAATACCTTACTTCCC
GAGGATTGCTTGACAGCACGCTTTACTACGACCGCCGGGCCCCAGCTTCG
CGAAGTACAAGGGACAGTAGTCGACCATGGGCCCGGCGCCGATGGACGCC
TCTACCCTACGGTATATACACTTTGGCACAACCCAGATCTGGTGCCACTG
CTCCATACTCCACAAATGGTCATGCAGAAACTGCACGGAGGAGCAGACCT
GATGACTCCGGGTCTGGCCAATGACCCGCCTTTCGACGAGCGTGCCGTCA
AGGGCGCAGTGGTTGCTGTCGCTAGTCTGAACAGGCATACGGTACCACTG
TTTGTGGGCGTGTGTGAGATTGACATCTCTGCACTTGGAGAGGTTCAGGG
TACGAAGGGACATGCCGTTCGGGGTCTGCACTGGGAAGGCGATGAGTTGT
GGGCTTGGAGCTCGTCTTCCAAGCCGGGTCAGCCCGCTCCAGAATATCTA
GATGGGTGGGATGATGAACTGGAAGAGGACGAAGATGTAGGAGAGATTGA
AGAGGGCGTGCAGGGCCTAGCAGTAGGAGGTGACAATGCAGTTCAAGCAA
CTGAAGGCGAGGAAGCATCAGATGAAGCGCCTGATGTCCCGCAGGAGGAG
GCACCTGAAGTTGAAGAGAAGGAGCCCACAACCAAAGAAATTGACGAGGC
TTTCGAAAAGGCCTTCCTCTACTCCCTCTACAAGCTCAAGCAAGATAATC
CATCTGCTACCAACCACGGTCTATCTCTACCCGTCCAACCATCTGCTCTG
ATATCAAACATGATCACACCCCACCTGCCCATATACACTGCCAAACAAGC
CCAATACTATCAAATCAAGAAGACCAGCTGGAAAAATGTGAAAAAGTTCA
TCAAATATCTGGACAAGCAGCGCCTGGTCAAGTCCAAAGACCGCAACGGC
CAAGAGACCGTCATCCTCGACGTGGACTTCAACGACCATCGTGTTGAACA
GTTCATCCCTTACAGACTCCCATCCAAAAACACCGTTGAGAACGCAGGAA
AGCCTGCCACTCAGGCAAATAACGCCAAAACCGCATCTACACAGAGCGGT
GACCCCTCAGTCGGCCAAACCCTGACCGTGCAGACTGTATATCGCCCAAC
CAACAAACTCACGCCGACCATCTTCCCTGCTCTATCCAGCACCCACCCCA
GCAACTACTACAAGTACACCGACATCTCCACTCACCTCGACCAATACATC
CAATCTCAAAATCCCCCGCTCGCCGACCCCAAAAACAAACGCATTATCAC
CCTCAACCCCTACCTCGCCAATACCATCTTCACCTCTTCCTCCGCCGATG
ACAAAAGCACTCTCGCCCGCGGCAAGACCACCCGCGACGGCCTCCTCAAG
CGTCTCATCGATGACCACTCCCTCATGACAGCCCACTACGTCATCCTACG
GCCCGGTCAAACCCTCTCCGACGTGAAGCCCAAAGCAGGCGCCGCCCCCA
AGGTCAACGTAATTCTCGAACGCCGCACCGGCTCCAAGACCGTCACCAAG
GTCTGGAACCTCGAAGTGTTCGGCATCATCCCTAGTCTTCTGGCCGAAGA
GCTGCAGAAGAAGTGTGCTAGCAGCACCAGCGTGACGCAGGCTACTGGCG
CGCCGAAGGGCGTTATGGAGGTGCTTGTCCAGGGAGACCAGCGACGCGCG
TTAGAGACGGCGTTGGTGAGACGTGGGTTGAGGACGCAGTGGATTGATGT
TGTGGATAAGACGAAGAAGAAGAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036877 |
| DBxref | InterPro:IPR036885 |
| DBxref | InterPro:IPR015947 |
| DBxref | InterPro:IPR039759 |
| DBxref | InterPro:IPR001950 |
| DBxref | InterPro:IPR036974 |
| DBxref | PFAM:PF01253 |
| Product | Translation initiation factor SUI1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2956469..2958593 + |
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