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CAN33_46915-T1, CAN33_46915-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46915-T1
Unique NameCAN33_46915-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2959205..2960477-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46915-T1 ID=CAN33_46915-T1|Name=CAN33_46915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1273bp|location=Sequence derived from alignment at NKJJ01000022.1:2959205..2960477- (Aspergillus niger FDAARGOS_311)
ATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAA
GGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCG
CCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATT
GTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCA
GAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGG
GCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAG
GTGACGGATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTC
TGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCA
GCGCCAACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATG
CGCCGCTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGA
GACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCC
TTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTC
GAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGA
GGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGAC
CCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGC
AGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGC
CCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCA
AGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTG
AAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCG
TGGCCGTGGTGGAAACCGTGGTCGTGACAACCGCGACTGGAGGGAGCGCC
GCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAG
GAGGAGCGCACTGAGGTTCAGAAGGATGCTCGGTATGTATTTACCTCTGC
TTCCCCCCTATCACCACCTTCACTACCCCATTTCTCAAAGCAAATGTATA
CTAACAAAACACCCCAGCGGTGTCCCCATTGTTCAGAGCACCGCCGAAAC
CGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACGGCGACCACCCGGCCA
AGAAGGTGGACGCCAAGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2959205..2960477-

>CAN33_46915-T1 ID=CAN33_46915-T1|Name=CAN33_46915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3204bp|location=Sequence derived from alignment at NKJJ01000022.1:2959205..2960477- (Aspergillus niger FDAARGOS_311)
CGGTGTCCCCATTGTTCAGAGCACCGCCGAAACCGGCCAGAAGCGTGCCG
CCGAAGACGAGGCGAACGGCGACCACCCGGCCAAGAAGGTGGACGCCAAG
GAGTAAAACGGCTTCAACGACAAGAAGAGTGAGCCCAAGGAGGAGCGCAC
TGAGGTTCAGAAGGATGCTCGATGTCCGAAGAGCAAAAGCCCGTCGCCCA
GCCCAACGCTGAGGCTGAGAAGGATGTCCAGAACGTCCTCGCCGAGCTGA
AGGGCGAGAACGAAGCCCCCGCCAACGGTACTGAGAAGAAGGAGGCCGAA
GATGCCGAGGAAGCCCGCATTGTCGAGGCCGCCGCCAAGCTGGGCGAGAA
GTCTGAGAAGGCTGAAGAGCAGAAGGAATCCAAGACACAGGAATCTCGCA
ACGACAACCGGGGTCGCGAGGGCCGCTTCAACCGCCGCAACAACGCCAAG
TTTGACCCCTCCACGCAGCAGGTGACGGATGACCCGGTCGAGATTCGCAA
GCAGGTTGAGTTCTACTTCTCTGACTCCAACCTGCCCATGGACAAGTTCC
TGTTCTCCAAGGTTGGTGGCAGCGCCAACCGTTCCGTTCCTCTGGAGCTT
CTGCACTCCTTCAAGCGCATGCGCCGCTTCCAGCCCTTCAGCGCCGTGGT
TGAAGCCCTCAAGTCGTCCGAGACGCTTGAGCTGACCGATAACGATACCT
CCGTGCGCCGGAAGACGCCCCTTCCGGAGTCCGTGTCGCAGACTCACGAC
CACAACGTGGTCAAGGTGTTCGAGGACCAGGCCATGAGCCGTAGCATCTA
CGCCAAGGGTTTCGGCGACGAGGAGCCGACTACCCAGCTTGACATCGAGG
CTTTCTTCGCCCCCTACGGACCCGTCAACGCCATCCGTCTGCGTCGTGCC
TACGACAAGACCTTCAAGGGCAGTGTTTTCGTTGAGTTCGAGTCGGAGGA
GAAGCAGAAGGCTTTCCTGGCCCTGGACCCCAAGCCCCAGTGGAAGGGAC
AGGACCTGCTCATCAAGAGCAAGAAGGATTACTGCGACGAGAAGGTGCGC
GAAATTGAGGCTGGCCGCCGGTGTCCCCATTGTTCAGAGCACCGCCGAAA
CCGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACGGCGACCACCCGGCC
AAGAAGGTGGACGCCAAGGAGTAAAACGGCTTCAACGACAAGAAGAGTGA
GCCCAAGGAGGAGCGCACTGAGGTTCAGAAGGATGCTCGATGTCCGAAGA
GCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAAGGATGTCCAGA
ACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCGCCAACGGTACT
GAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATTGTCGAGGCCGC
CGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCAGAAGGAATCCA
AGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGGGCCGCTTCAAC
CGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAGGTGACGGATGA
CCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTCTGACTCCAACC
TGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCAGCGCCAACCGT
TCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATGCGCCGCTTCCA
GCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGAGACGCTTGAGC
TGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCCTTCCGGAGTCC
GTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTCGAGGACCAGGC
CATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGAGGAGCCGACTA
CCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGACCCGTCAACGCC
ATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGCAGTGTTTTCGT
TGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGCCCTGGACCCCA
AGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCAAGAAGGATTAC
TGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCCGGTGTCCCCATTG
TTCAGAGCACCGCCGAAACCGGCCAGAAGCGTGCCGCCGAAGACGAGGCG
AACGGCGACCACCCGGCCAAGAAGGTGGACGCCAAGGAGTAAAACGGCTT
CAACGACAAGAAGAGTGAGCCCAAGGAGGAGCGCACTGAGGTTCAGAAGG
ATGCTCGATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGG
CTGAGAAGGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAA
GCCCCCGCCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGC
CCGCATTGTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTG
AAGAGCAGAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGT
CGCGAGGGCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCAC
GCAGCAGGTGACGGATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCT
ACTTCTCTGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTT
GGTGGCAGCGCCAACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAA
GCGCATGCGCCGCTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGT
CGTCCGAGACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAG
ACGCCCCTTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAA
GGTGTTCGAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCG
GCGACGAGGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCC
TACGGACCCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTT
CAAGGGCAGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTT
TCCTGGCCCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATC
AAGAGCAAGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGG
CCGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46915CAN33_46915Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46915-T1CAN33_46915-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46915-T1.cdsCAN33_46915-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46915-T1.exon3CAN33_46915-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46915-T1.exon2CAN33_46915-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46915-T1.exon1CAN33_46915-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR006630
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR002344
DBxrefPFAM:PF00076
DBxrefPFAM:PF05383
ProductLa domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2959205..2960477 -
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