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CAN33_46935-T1, CAN33_46935-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46935-T1
Unique NameCAN33_46935-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2971426..2972434+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46935-T1 ID=CAN33_46935-T1|Name=CAN33_46935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1009bp|location=Sequence derived from alignment at NKJJ01000022.1:2971426..2972434+ (Aspergillus niger FDAARGOS_311)
ATGTCCACAGATCGAAAGACCGTCCTCATCACGGGCTGCTCCGATGGAGG
CATCGGAGCTGCACTGGCTGAGACTTTCCACGATCACCGTTATCATGTCT
TTGCCACTGTGCGCACGCCATCAAAGGCCCCCAAGTCTCTCATCAACTCT
CCCAATGCCACCGTCCTCACCCTGGATGTGCTGGACTCGACGTCTATCTC
CGATGCAGTGGAAAAGGTGACGAAAGCCACTGGCGGCAAGCTTGACGTTC
TAGTAAACAATAGTGGAGGCAGCATTATCCTCCCCGCTTTGGATACTTCA
ATCGAAGACGGCAAAAAGTTATTCGACTTGAATTTCTGGGCGCCCTTAGC
TGTGACGCAGGCCTTTGCTCCTTTACTGGTCAGGTCCAAAGGTTGTCTTG
TAAACAATACATCAGTGAATGGAGCTCTTCCATTTGTATTTATGAGTGAG
CCCAATCCTTCTCCAACTACAGTCACAGAGCCTGGCATCCTTTGACTAAT
ATATCTCACTTAAGGCATGTACAATTCCTCAAAAGCGGCCTTTATGAGCG
CCAGCGAGACTTGGCGTATGGAGCTGGCTCCGCTGGGTGTTCGGACCATT
ACTCTCATGACTGGTGGTGTGAAGACTAAGTTCTTTGACAACTACGTTCC
TCGCCAAGTCCCCGAGAACTCCTATTACATTGGAGCAAAGGATGCTATTC
AGAAAATGGGAGATGGGAGCTTGCAGGATAGCGGCGTCGATAGGTACTCA
TATGCCTCTAAGGTGTTTCAGGCAGTCGAGAGGAAGGAGTCAGGAAAGCT
GTGGGTTGGTGGAGGCGCTGTTCCTGCGAAATGGGCACTGTGGTTATTGC
CGCAATGGGGTGTGGTAGGTATCCTTCGCTTGTTTGCTGCAGAGTACCTA
TGTGGCATTGATGAAGATGATGTACTAAATGCTTTGGTAGGATTTGATGA
TGAGAAAAATGTTTCCTGTGTTTGGAACAATCGAAGCTGGGGTGAAGAAA
GACGCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2971426..2972434+

>CAN33_46935-T1 ID=CAN33_46935-T1|Name=CAN33_46935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2592bp|location=Sequence derived from alignment at NKJJ01000022.1:2971426..2972434+ (Aspergillus niger FDAARGOS_311)
ATGTCCACAGATCGAAAGACCGTCCTCATCACGGGCTGCTCCGATGGAGG
CATCGGAGCTGCACTGGCTGAGACTTTCCACGATCACCGTTATCATGTCT
TTGCCACTGTGCGCACGCCATCAAAGGCCCCCAAGTCTCTCATCAACTCT
CCCAATGCCACCGTCCTCACCCTGGATGTGCTGGACTCGACGTCTATCTC
CGATGCAGTGGAAAAGGTGACGAAAGCCACTGGCGGCAAGCTTGACGTTC
TAGTAAACAATAGTGGAGGCAGCATTATCCTCCCCGCTTTGGATACTTCA
ATCGAAGACGGCAAAAAGTTATTCGACTTGAATTTCTGGGCGCCCTTAGC
TGTGACGCAGGCCTTTGCTCCTTTACTGGTCAGGTCCAAAGGTTGTCTTG
TAAACAATACATCAGTGAATGGAGCTCTTCCATTTGTATTTATGAGCATG
TACAATTCCTCAAAAGCGGCCTTTATGAGCGCCAGCGAGACTTGGCGTAT
GGAGCTGGCTCCGCTGGGTGTTCGGACCATTACTCTCATGACTGGTGGTG
TGAAGACTAAGTTCTTTGACAACTACGTTCCTCGCCAAGTCCCCGAGAAC
TCCTATTACATTGGAGCAAAGGATGCTATTCAGAAAATGGGAGATGGGAG
CTTGCAGGATAGCGGCGTCGATAGGTACTCATATGCCTCTAAGGTGTTTC
AGGCAGTCGAGAGGAAGGAGTCAGGAAAGCTGTGGGTTGGTGGAGGCGCT
GTTCCTGCGAAATGGGCACTGTGGTTATTGCCGCAATGGGGTGTGGATTT
GATGATGAGAAAAATGTTTCCTGTGTTTGGAACAATCGAAGCTGGGGTGA
AGAAAGACGCTTAAATGTCCACAGATCGAAAGACCGTCCTCATCACGGGC
TGCTCCGATGGAGGCATCGGAGCTGCACTGGCTGAGACTTTCCACGATCA
CCGTTATCATGTCTTTGCCACTGTGCGCACGCCATCAAAGGCCCCCAAGT
CTCTCATCAACTCTCCCAATGCCACCGTCCTCACCCTGGATGTGCTGGAC
TCGACGTCTATCTCCGATGCAGTGGAAAAGGTGACGAAAGCCACTGGCGG
CAAGCTTGACGTTCTAGTAAACAATAGTGGAGGCAGCATTATCCTCCCCG
CTTTGGATACTTCAATCGAAGACGGCAAAAAGTTATTCGACTTGAATTTC
TGGGCGCCCTTAGCTGTGACGCAGGCCTTTGCTCCTTTACTGGTCAGGTC
CAAAGGTTGTCTTGTAAACAATACATCAGTGAATGGAGCTCTTCCATTTG
TATTTATGAGCATGTACAATTCCTCAAAAGCGGCCTTTATGAGCGCCAGC
GAGACTTGGCGTATGGAGCTGGCTCCGCTGGGTGTTCGGACCATTACTCT
CATGACTGGTGGTGTGAAGACTAAGTTCTTTGACAACTACGTTCCTCGCC
AAGTCCCCGAGAACTCCTATTACATTGGAGCAAAGGATGCTATTCAGAAA
ATGGGAGATGGGAGCTTGCAGGATAGCGGCGTCGATAGGTACTCATATGC
CTCTAAGGTGTTTCAGGCAGTCGAGAGGAAGGAGTCAGGAAAGCTGTGGG
TTGGTGGAGGCGCTGTTCCTGCGAAATGGGCACTGTGGTTATTGCCGCAA
TGGGGTGTGGATTTGATGATGAGAAAAATGTTTCCTGTGTTTGGAACAAT
CGAAGCTGGGGTGAAGAAAGACGCTTAAATGTCCACAGATCGAAAGACCG
TCCTCATCACGGGCTGCTCCGATGGAGGCATCGGAGCTGCACTGGCTGAG
ACTTTCCACGATCACCGTTATCATGTCTTTGCCACTGTGCGCACGCCATC
AAAGGCCCCCAAGTCTCTCATCAACTCTCCCAATGCCACCGTCCTCACCC
TGGATGTGCTGGACTCGACGTCTATCTCCGATGCAGTGGAAAAGGTGACG
AAAGCCACTGGCGGCAAGCTTGACGTTCTAGTAAACAATAGTGGAGGCAG
CATTATCCTCCCCGCTTTGGATACTTCAATCGAAGACGGCAAAAAGTTAT
TCGACTTGAATTTCTGGGCGCCCTTAGCTGTGACGCAGGCCTTTGCTCCT
TTACTGGTCAGGTCCAAAGGTTGTCTTGTAAACAATACATCAGTGAATGG
AGCTCTTCCATTTGTATTTATGAGCATGTACAATTCCTCAAAAGCGGCCT
TTATGAGCGCCAGCGAGACTTGGCGTATGGAGCTGGCTCCGCTGGGTGTT
CGGACCATTACTCTCATGACTGGTGGTGTGAAGACTAAGTTCTTTGACAA
CTACGTTCCTCGCCAAGTCCCCGAGAACTCCTATTACATTGGAGCAAAGG
ATGCTATTCAGAAAATGGGAGATGGGAGCTTGCAGGATAGCGGCGTCGAT
AGGTACTCATATGCCTCTAAGGTGTTTCAGGCAGTCGAGAGGAAGGAGTC
AGGAAAGCTGTGGGTTGGTGGAGGCGCTGTTCCTGCGAAATGGGCACTGT
GGTTATTGCCGCAATGGGGTGTGGATTTGATGATGAGAAAAATGTTTCCT
GTGTTTGGAACAATCGAAGCTGGGGTGAAGAAAGACGCTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46935CAN33_46935Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46935-T1.exon1CAN33_46935-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46935-T1.exon2CAN33_46935-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46935-T1.exon3CAN33_46935-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46935-T1.cdsCAN33_46935-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46935-T1CAN33_46935-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.8
NoteEggNog:ENOG41
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2971426..2972434 +
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