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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3017032..3018252- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_47010-T1 ID=CAN33_47010-T1|Name=CAN33_47010-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1221bp|location=Sequence derived from alignment at NKJJ01000022.1:3017032..3018252- (Aspergillus niger FDAARGOS_311)
ATGAAGAGGCTGCAGCTCCAACGATGGAGCAGTTCGGTCCTTTCGGCGCA
GGCCCGGACTGGTGGCCGCCTGCAGCACCGTCTCTACACTGGCATCCGGC
ATCAATCGACCGCTTCGCCTGCTGCGCCGGCTGCCAATGATCAATTGATC
GAGGAAGACCCTCTAGTATCATCTATTCGCCCCCCTACCTCCCGACAGTC
GAAGTACCAACTCCCGTCTCCCCCGGTCGAGGCCGCACGCGAGTCCGCCA
AACTGGCTGCGCTTCACGCACGACTTTACCTTCCTTCACGATTACCGCTC
GAGACCCTTGCTCGCTCTCTCGTGGACGCCTCGGCTGATCCGAACCCCAA
ATTCAACAATGAATCTTTGGCCACCCTCGGTCACGATTTGTTGACACACT
ACACCTCCGAATACCTCATCTGCACGTATCCCCGACTCCCCTTGACCGTT
ATATTCGCAGCCATGTATGCCTATGTCGGGCCAAAGACATTGGCCGCAAT
GGCGAGAGAATGGGGTGTGGAGTCCGCTGCTGCTCCTGGTGGAGAAGTTG
ACCCCGGCTACCTGCAGTTCAACAGAGTACTCCCGGGAGTTGACGTGCAC
TCGAAGCCTGTCACTGGCACAGCGAGACCTCATGAAGATCAGACGCATTG
GCGGAAGTCCATCACGTCAAGTGTCGTCTACGACAATGAGTTCGGAGACC
CGGTCAAGGGGCCCAAGGATCCCTCGGAACAGTCCAAGCAGGACGTCCAG
AACACCCAGGGCGTGACTGCCGAACAGGCTAACGCAACCTTTGTGCGTGC
TGTGATGGGTGCTATCTACCTGCACGCAGGCCGCCCTGCTGCCAAGCGGT
TCTTCGAGCAGCACTTCCTCTCTCGTCACCTCAACATCTCCGACCTGTTC
AACTTCTCCCAACCCGCTCGGGACCTTGCTCGCCTGTGTGCTCGAGAGAA
CTTCGAGCAGCCCGTTGCCCGGATCATCAGTGAAACCGGTCGCAAGAGCA
GACACCCCGTGTTTGTCGTTGGCATCTACTCTGGTCAGGATAAGTTGGGC
GAGGGCGCTGGCGCCAGTCTGCTCGAGGCTCGTTCCAGGGCTGCTGTCGC
CGCCCTGAAGGGATGGTACCTGTACAGTCCGCTGAACGTGCGCGTGCCTA
GTTCGATGGAGGAAGAGGGAGCCGCTCCCTGGAAGCCGGTGCACGTGGAC
TTGGGCGAGGTGATTGTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3017032..3018252- >CAN33_47010-T1 ID=CAN33_47010-T1|Name=CAN33_47010-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1221bp|location=Sequence derived from alignment at NKJJ01000022.1:3017032..3018252- (Aspergillus niger FDAARGOS_311)
ATGAAGAGGCTGCAGCTCCAACGATGGAGCAGTTCGGTCCTTTCGGCGCA
GGCCCGGACTGGTGGCCGCCTGCAGCACCGTCTCTACACTGGCATCCGGC
ATCAATCGACCGCTTCGCCTGCTGCGCCGGCTGCCAATGATCAATTGATC
GAGGAAGACCCTCTAGTATCATCTATTCGCCCCCCTACCTCCCGACAGTC
GAAGTACCAACTCCCGTCTCCCCCGGTCGAGGCCGCACGCGAGTCCGCCA
AACTGGCTGCGCTTCACGCACGACTTTACCTTCCTTCACGATTACCGCTC
GAGACCCTTGCTCGCTCTCTCGTGGACGCCTCGGCTGATCCGAACCCCAA
ATTCAACAATGAATCTTTGGCCACCCTCGGTCACGATTTGTTGACACACT
ACACCTCCGAATACCTCATCTGCACGTATCCCCGACTCCCCTTGACCGTT
ATATTCGCAGCCATGTATGCCTATGTCGGGCCAAAGACATTGGCCGCAAT
GGCGAGAGAATGGGGTGTGGAGTCCGCTGCTGCTCCTGGTGGAGAAGTTG
ACCCCGGCTACCTGCAGTTCAACAGAGTACTCCCGGGAGTTGACGTGCAC
TCGAAGCCTGTCACTGGCACAGCGAGACCTCATGAAGATCAGACGCATTG
GCGGAAGTCCATCACGTCAAGTGTCGTCTACGACAATGAGTTCGGAGACC
CGGTCAAGGGGCCCAAGGATCCCTCGGAACAGTCCAAGCAGGACGTCCAG
AACACCCAGGGCGTGACTGCCGAACAGGCTAACGCAACCTTTGTGCGTGC
TGTGATGGGTGCTATCTACCTGCACGCAGGCCGCCCTGCTGCCAAGCGGT
TCTTCGAGCAGCACTTCCTCTCTCGTCACCTCAACATCTCCGACCTGTTC
AACTTCTCCCAACCCGCTCGGGACCTTGCTCGCCTGTGTGCTCGAGAGAA
CTTCGAGCAGCCCGTTGCCCGGATCATCAGTGAAACCGGTCGCAAGAGCA
GACACCCCGTGTTTGTCGTTGGCATCTACTCTGGTCAGGATAAGTTGGGC
GAGGGCGCTGGCGCCAGTCTGCTCGAGGCTCGTTCCAGGGCTGCTGTCGC
CGCCCTGAAGGGATGGTACCTGTACAGTCCGCTGAACGTGCGCGTGCCTA
GTTCGATGGAGGAAGAGGGAGCCGCTCCCTGGAAGCCGGTGCACGTGGAC
TTGGGCGAGGTGATTGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004525 | ribonuclease III activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263CGP |
| DBxref | InterPro:IPR036389 |
| DBxref | InterPro:IPR000999 |
| DBxref | InterPro:IPR014720 |
| DBxref | PFAM:PF00636 |
| DBxref | PFAM:PF00035 |
| Product | Ribonuclease III domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3017032..3018252 - |
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