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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3055799..3056864+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_47090-T1 ID=CAN33_47090-T1|Name=CAN33_47090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1066bp|location=Sequence derived from alignment at NKJJ01000022.1:3055799..3056864+ (Aspergillus niger FDAARGOS_311)
ATGGGCGACCGCACTGTGGGATTGGAAACGGGTCTTTGCAAGATGCTTCG
GACGGTCTTTCTCTGAAGCGCAAATTGCTGACTCGACTGTGTCTTGTAGC
CTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAGGTAAGAAATCCAC
AAGACCCCTCATTTGGCAAAAATTTGGCATAAACTAATAAAATTCCTTCT
ACAGCCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGAC
TACTATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGC
CCCCAAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCC
AGATCGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTAC
TCCCACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGC
TGCCGCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGC
TCGGCCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTAC
ACCCTCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAA
GGCTTTCCTTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCT
TCGGTGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCC
GAGAGCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGA
GACTCTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGG
GTCTTGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTAC
CAGGAGGCTGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGC
CCACAAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTG
AGAAGAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAG
CAGCGCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCG
TGAGCTTGCTGCTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3055799..3056864+ >CAN33_47090-T1 ID=CAN33_47090-T1|Name=CAN33_47090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2862bp|location=Sequence derived from alignment at NKJJ01000022.1:3055799..3056864+ (Aspergillus niger FDAARGOS_311)
ATGGGCGACCGCACTGTGGGATTGGAAACGGGTCTTTGCAAGATGCTTCG
GACGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAGCCGCTACC
AGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACTACTATGCCCGT
AAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAGTACCG
CCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGTCTACT
CTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACGAGCTC
AAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCCTACGC
CACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCTGGATG
AGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCACCGAG
GCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTCCTTGA
TGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGCCATGA
AGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCCGCTTC
CCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTCCGCAA
CTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGCCGACG
ACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGGCTGGT
GTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAGGCCAT
CCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAAGACCA
AGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCCTCACC
CGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTTGCTGC
TTAAATGGGCGACCGCACTGTGGGATTGGAAACGGGTCTTTGCAAGATGC
TTCGGACGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAGCCGC
TACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACTACTATGC
CCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAGT
ACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGTC
TACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACGA
GCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCCT
ACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCTG
GATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCAC
CGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTCC
TTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGCC
ATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCCG
CTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTCC
GCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGCC
GACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGGC
TGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAGG
CCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAAG
ACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCCT
CACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTTG
CTGCTTAAATGGGCGACCGCACTGTGGGATTGGAAACGGGTCTTTGCAAG
ATGCTTCGGACGCCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAG
CCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACTACT
ATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCC
AAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGAT
CGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCC
ACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCC
GCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGG
CCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCC
TCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCT
TTCCTTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGG
TGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGA
GCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACT
CTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCT
TGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGG
AGGCTGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCAC
AAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAA
GAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGC
GCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAG
CTTGCTGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008097 | 5S rRNA binding |
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926419M |
| DBxref | InterPro:IPR025607 |
| DBxref | InterPro:IPR005485 |
| DBxref | PFAM:PF17144 |
| DBxref | PFAM:PF14204 |
| Product | 60S ribosomal protein L5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3055799..3056864 + |
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