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CAN33_47180-T1, CAN33_47180-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47180-T1
Unique NameCAN33_47180-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3119928..3122672-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47180-T1 ID=CAN33_47180-T1|Name=CAN33_47180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2745bp|location=Sequence derived from alignment at NKJJ01000022.1:3119928..3122672- (Aspergillus niger FDAARGOS_311)
ATGCCATCTTCTAAGGATATGAACTGGGATACCTCCCGCTGGCAACCATT
GATTGAAGACCGTTCGTTCTTGCCATGGCTGGTTGCTGCCCCGTCCGACC
AGGAACAGCTCCGCGCTCGCCACCTCAGTCCGCAGTTGATTGCTAAGCTG
GAAGAGATGTGGAAGGAAAATTCTCAAGCGACATTCTCGGATTTGGAGAA
GGCCACGGCTGTGGACGATGAGCCAGCACCTGTGCTTCTGCGTTATGATG
ATGCTTTCCAGTATCAGAACATTTTTGGGCCTTTGGTCAAGATTGAGGCC
GACTATGACCGCAAGTTGAAGGAATCCCAATCGCAGGATGGACTGATCGT
GCGCTGGGACCTTGGTCTCAACAACAAGCATCTGGCTAGCTTCATTTTGC
CTAAGCTCGAACTTGGCGATGTTAAATTGGCCGTGGGAGATGAAATGCGC
CTCAAGTATACCGGCGAACTGCGGCCCAAATGGGAAGGAGTTGGATATGT
CATTAAAATTCCGAACAACCAGTCCGATGAAGTGACGATTGAGTTACGCG
CAAAGGGTGATCATAAGTCTGTGCCTACAGAGTGCACGCACAATTTCACA
GTTGACTACGTCTGGAAGTCTACATCATTTGATCGTATGCAGCTGGCTAT
GAAAACATTTGCCGTGGATGAGATGAGTGTGTCTGGTTACATTTTCCATC
GCCTTCTCGGACACGAAGTCGCAGCCGCGCCGATGAAGACCCAAATGCCG
AAGAAGTTCAGCGTTCCGGGACTTCCAGAACTCAACGGTAGTCAGATTAA
CGCTGTGAAGAGCGTGCTGCAGAGACCTTTGAGTTTGATTCAAGGACCTC
CGGGAACGGGAAAGACTGTCACCTCGGCTACGATCATCTACCATCTTGCG
AAGATCAACGGTGGTCAGGTGTTGGTGTGCGCCCCCTCGAACGTTGCGGT
TGACCAACTTTGTGAGCGTATCCATCGGACAGGTCTGAAGACTGTGCGTG
TGACAGCTAAATCGCGAGAGGATGTTGAATCGCCGGTTGGCTTCTTGTCC
TTGCACGAACAAGTCCGCATCAACGATACCAACATCGAACTCATTAAGCT
CAATCAGCTCAAGGCCGAGCTTGGAGAGTTGTCCAGTCAAGATGAGAAAC
GACTGAAACAGCTGACCCGCTCGGCGGAGCGCGAGATCTTGAATAACGCC
GACGTAATCTGCTGTACTTGCGTTGGTGCTGGTGATCCTCGTCTGGCGAA
GCTCAAGTTCCGTACCGTCCTGATTGACGAATCGACCCAGTCGGCTGAGC
CAGAATGTATGATTCCCTTGGTTCTCGGATGCAAGCAAGTAGTCCTTGTC
GGCGATCACCAACAGCTGGGACCTGTCATCATGAACAAGAAGGCAGCTAA
GGCTGGTCTTAACCAGTCACTTTTCGAACGTCTCGTCATTCTTGGCTGCT
CCCCTATTCGTCTTAACGTTCAGTACCGTATGCACCCGTGCCTGTCGGAG
TTCCCGTCGAACATGTTCTATGAAGGTTCTCTACAGAACGGTATCTCTTC
GTTTGAGCGTCTCCGCCGTGACGTCGACTTCCCCTGGCCCATTGCCGATA
ACCCTATGATGTTCTGGTCGAACCTGGGTAACGAGGAGATTTCGGCCTCC
GGAACCTCTTACCTTAACCGCACTGAAGCGACGAACGTGGAGAAAATTGT
CACCCGCTTCTTCAAAGCTGGAGTGCAGCCCCAGGACATTGGTATTATCA
CTCCTTATGAGGGTCAGCGCAGCTACATTGTTAGCTCTATGCAAGCTAAT
GGCACCTTCAAGAAAGAGCATTACAAGGAGATCGAGGTGGCTTCGGTCGA
TGCCTTCCAGGGTCGTGAGAAGGACTTCATCATCCTTTCTTGTGTGCGTT
CCAACGACCACCAGGGTATTGGTTTCTTAAGTGATCCTCGCCGTCTCAAC
GTCGCTCTCACTCGTGCCAAGTATGGTCTGGCCATCCTTGGAAACCCGAA
GGTCTTGTCGAAGCATCCTTTGTGGAACTGTCTCCTGCAGCATTTCAAGG
AAAGGCACTGCCTGGTTGAGGGACCCTTGTCTAACCTGCAAGAGTCTTTG
ATCCAATTCAGCCGACCTAAGCAGGCATACCGGGGTCCCCAGCGGTTCCA
GATGGCTTACAACCATGCTTCTAATGTTACCAGCGGGTTGATGAATGGAA
GGAACGGTCAGCGCAATGACTTCCATGACACCGGCTCAGTGGTTGGTTAC
ATCCCCGATGATGTCTCTTCCGTCCACTCCTCTGCCCTGGGCGGGGTTGG
CATTCCCTCTGGTTATCCTCCCATGTTCCAGAATTTCGCGGACGCGTGGC
CCGCTCTTCCCGGAGCCCGTCGGGCCAATGGTAACCGTATGAAGGGAGCA
CCTAGCATTGCCGGAGAATCTGTGGCAGCCACCGAGTCCGATGTTACTGG
AAGCATCATTGATGGGAAGAGCGTCGACCAAGGTGGTGTCAGCCTTGCTG
GCTTGAGCATCAACGATATGGGCAAGCAGCCCAGTCTCAGTCAGTCCGAT
CGGCTGAAGCGCTACGTGGAATCCGGAGGCCGGGAGCCTTACAAGCCCGG
TGTTCCCGATAACGGCAGCATTTTTGGCGGAAGCTCTGCTAGCATTCGTG
TCACTCGTGGTGTGCCAGGCCACATTCACGATGACGATGATACGCGCAGT
GTTTCGACTGCATTCGCCAGTCAGGTTGGGGGCAACTATGATTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3119928..3122672-

>CAN33_47180-T1 ID=CAN33_47180-T1|Name=CAN33_47180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2745bp|location=Sequence derived from alignment at NKJJ01000022.1:3119928..3122672- (Aspergillus niger FDAARGOS_311)
ATGCCATCTTCTAAGGATATGAACTGGGATACCTCCCGCTGGCAACCATT
GATTGAAGACCGTTCGTTCTTGCCATGGCTGGTTGCTGCCCCGTCCGACC
AGGAACAGCTCCGCGCTCGCCACCTCAGTCCGCAGTTGATTGCTAAGCTG
GAAGAGATGTGGAAGGAAAATTCTCAAGCGACATTCTCGGATTTGGAGAA
GGCCACGGCTGTGGACGATGAGCCAGCACCTGTGCTTCTGCGTTATGATG
ATGCTTTCCAGTATCAGAACATTTTTGGGCCTTTGGTCAAGATTGAGGCC
GACTATGACCGCAAGTTGAAGGAATCCCAATCGCAGGATGGACTGATCGT
GCGCTGGGACCTTGGTCTCAACAACAAGCATCTGGCTAGCTTCATTTTGC
CTAAGCTCGAACTTGGCGATGTTAAATTGGCCGTGGGAGATGAAATGCGC
CTCAAGTATACCGGCGAACTGCGGCCCAAATGGGAAGGAGTTGGATATGT
CATTAAAATTCCGAACAACCAGTCCGATGAAGTGACGATTGAGTTACGCG
CAAAGGGTGATCATAAGTCTGTGCCTACAGAGTGCACGCACAATTTCACA
GTTGACTACGTCTGGAAGTCTACATCATTTGATCGTATGCAGCTGGCTAT
GAAAACATTTGCCGTGGATGAGATGAGTGTGTCTGGTTACATTTTCCATC
GCCTTCTCGGACACGAAGTCGCAGCCGCGCCGATGAAGACCCAAATGCCG
AAGAAGTTCAGCGTTCCGGGACTTCCAGAACTCAACGGTAGTCAGATTAA
CGCTGTGAAGAGCGTGCTGCAGAGACCTTTGAGTTTGATTCAAGGACCTC
CGGGAACGGGAAAGACTGTCACCTCGGCTACGATCATCTACCATCTTGCG
AAGATCAACGGTGGTCAGGTGTTGGTGTGCGCCCCCTCGAACGTTGCGGT
TGACCAACTTTGTGAGCGTATCCATCGGACAGGTCTGAAGACTGTGCGTG
TGACAGCTAAATCGCGAGAGGATGTTGAATCGCCGGTTGGCTTCTTGTCC
TTGCACGAACAAGTCCGCATCAACGATACCAACATCGAACTCATTAAGCT
CAATCAGCTCAAGGCCGAGCTTGGAGAGTTGTCCAGTCAAGATGAGAAAC
GACTGAAACAGCTGACCCGCTCGGCGGAGCGCGAGATCTTGAATAACGCC
GACGTAATCTGCTGTACTTGCGTTGGTGCTGGTGATCCTCGTCTGGCGAA
GCTCAAGTTCCGTACCGTCCTGATTGACGAATCGACCCAGTCGGCTGAGC
CAGAATGTATGATTCCCTTGGTTCTCGGATGCAAGCAAGTAGTCCTTGTC
GGCGATCACCAACAGCTGGGACCTGTCATCATGAACAAGAAGGCAGCTAA
GGCTGGTCTTAACCAGTCACTTTTCGAACGTCTCGTCATTCTTGGCTGCT
CCCCTATTCGTCTTAACGTTCAGTACCGTATGCACCCGTGCCTGTCGGAG
TTCCCGTCGAACATGTTCTATGAAGGTTCTCTACAGAACGGTATCTCTTC
GTTTGAGCGTCTCCGCCGTGACGTCGACTTCCCCTGGCCCATTGCCGATA
ACCCTATGATGTTCTGGTCGAACCTGGGTAACGAGGAGATTTCGGCCTCC
GGAACCTCTTACCTTAACCGCACTGAAGCGACGAACGTGGAGAAAATTGT
CACCCGCTTCTTCAAAGCTGGAGTGCAGCCCCAGGACATTGGTATTATCA
CTCCTTATGAGGGTCAGCGCAGCTACATTGTTAGCTCTATGCAAGCTAAT
GGCACCTTCAAGAAAGAGCATTACAAGGAGATCGAGGTGGCTTCGGTCGA
TGCCTTCCAGGGTCGTGAGAAGGACTTCATCATCCTTTCTTGTGTGCGTT
CCAACGACCACCAGGGTATTGGTTTCTTAAGTGATCCTCGCCGTCTCAAC
GTCGCTCTCACTCGTGCCAAGTATGGTCTGGCCATCCTTGGAAACCCGAA
GGTCTTGTCGAAGCATCCTTTGTGGAACTGTCTCCTGCAGCATTTCAAGG
AAAGGCACTGCCTGGTTGAGGGACCCTTGTCTAACCTGCAAGAGTCTTTG
ATCCAATTCAGCCGACCTAAGCAGGCATACCGGGGTCCCCAGCGGTTCCA
GATGGCTTACAACCATGCTTCTAATGTTACCAGCGGGTTGATGAATGGAA
GGAACGGTCAGCGCAATGACTTCCATGACACCGGCTCAGTGGTTGGTTAC
ATCCCCGATGATGTCTCTTCCGTCCACTCCTCTGCCCTGGGCGGGGTTGG
CATTCCCTCTGGTTATCCTCCCATGTTCCAGAATTTCGCGGACGCGTGGC
CCGCTCTTCCCGGAGCCCGTCGGGCCAATGGTAACCGTATGAAGGGAGCA
CCTAGCATTGCCGGAGAATCTGTGGCAGCCACCGAGTCCGATGTTACTGG
AAGCATCATTGATGGGAAGAGCGTCGACCAAGGTGGTGTCAGCCTTGCTG
GCTTGAGCATCAACGATATGGGCAAGCAGCCCAGTCTCAGTCAGTCCGAT
CGGCTGAAGCGCTACGTGGAATCCGGAGGCCGGGAGCCTTACAAGCCCGG
TGTTCCCGATAACGGCAGCATTTTTGGCGGAAGCTCTGCTAGCATTCGTG
TCACTCGTGGTGTGCCAGGCCACATTCACGATGACGATGATACGCGCAGT
GTTTCGACTGCATTCGCCAGTCAGGTTGGGGGCAACTATGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005524ATP binding
GO:0003677DNA binding
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47180CAN33_47180Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47180-T1.cdsCAN33_47180-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47180-T1.exon1CAN33_47180-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47180-T1CAN33_47180-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR018999
DBxrefInterPro:IPR041677
DBxrefInterPro:IPR040812
DBxrefInterPro:IPR041679
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF18141
DBxrefPFAM:PF13604
DBxrefPFAM:PF13245
DBxrefPFAM:PF13087
ProductAAA domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3119928..3122672 -
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