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CAN33_47225-T1, CAN33_47225-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47225-T1
Unique NameCAN33_47225-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3151985..3153219-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47225-T1 ID=CAN33_47225-T1|Name=CAN33_47225-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1235bp|location=Sequence derived from alignment at NKJJ01000022.1:3151985..3153219- (Aspergillus niger FDAARGOS_311)
ATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCTAGCAGATCTTCTCAACC
TGGATTATATTCCCTCACAGGCAATTCCATTGACGGCAAGGGCGGAGCTA
GCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAGCCATGGATCACACAGGC
CCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAA
TCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGT
CGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAG
CACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATG
GTTGAAGGTACCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCAT
GCTTCATACTGCATCGTTACTGTAAGCTGTTTTCATCGTGCCTCGGTTTA
GTCTGGACACCTACCTGACCTATGGCGTATGAGCCAGGATCGATGATGTC
GAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACATATA
CGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTGCTC
TGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTACGTC
CAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGCG
AGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTA
ACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAA
AGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGAT
TTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACACCA
AGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCC
ATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTAT
TCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGTT
ACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAA
TTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCAAGC
AGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGATCA
CCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3151985..3153219-

>CAN33_47225-T1 ID=CAN33_47225-T1|Name=CAN33_47225-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3411bp|location=Sequence derived from alignment at NKJJ01000022.1:3151985..3153219- (Aspergillus niger FDAARGOS_311)
GATCGATGATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAG
CTCATAACATATACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTA
TATTTCCTTGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGAT
TGACATCTACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGG
ATCTCTTCTGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTG
GAAATGGTCGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTT
GATGCAGGCTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACG
TCATGGGGCTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAAC
ACTACGTACACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAA
GTTCTCCTTTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACCACC
AGCTCCTGAGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTG
TATGCAGTCAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGA
CGTGGTCCGAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCG
ATGGTGACCAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATC
CTCAACAAGATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGGT
GGTGGCCATGCTTCATACTGCATCGTTACTATGTCTGCAGGGCCGTTTCC
AGATTTCTCTGCTAGCAGATCTTCTCAACCTGGATTATATTCCCTCACAG
GCAATTCCATTGACGGCAAGGGCGGAGCTAGCCTAGGAAAGCCTGATCTC
CTGGTGAGCCCAGCCATGGATCACACAGGCCCGGATGAAGATGGGCTCCC
AACAAACACGAACCACTCGCGCATGCACAATCGTAATCGCTCCAGCGTCG
ATGGAACCAAATACAAGGATGGACAATGGTCGCCAGATAATGAGAGAATC
GTTCTGGGACCATACGATTATATGCTACAGCACCCCGGCAAAGACATACG
GCGGCAGCTTATCAACGCTTTCAACGTATGGTTGAAGGATCGATGATGTC
GAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACATATA
CGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTGCTC
TGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTACGTC
CAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGCG
AGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTA
ACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAA
AGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGAT
TTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACACCA
AGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCC
ATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTAT
TCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGTT
ACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAA
TTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCAAGC
AGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGATCA
CCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGGTGGTGGCCATGCTT
CATACTGCATCGTTACTATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCT
AGCAGATCTTCTCAACCTGGATTATATTCCCTCACAGGCAATTCCATTGA
CGGCAAGGGCGGAGCTAGCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAG
CCATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACGAAC
CACTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATA
CAAGGATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCAT
ACGATTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATC
AACGCTTTCAACGTATGGTTGAAGGATCGATGATGTCGAGGATAACTCTA
TTTTGCGACGCGGTATTCCCGTAGCTCATAACATATACGGCACCGCGCAA
ACCATCAACTCTGCGAACTATGTATATTTCCTTGCTCTGCAAGAGGTGCA
AAAGTTGAACAACCCCGCTGCGATTGACATCTACGTCCAAGAGTTATTGA
ACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGCGAGATACTCTGACT
TGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTAACAAAACTGGGGG
TTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAAAGTAGCTCCGGAA
AGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGATTTTCCAAATCTGC
GACGACTACCTCAACCTGTCCAACACTACGTACACCAAGAACAAAGGTCT
TTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCCATCATTCATAGTA
TCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTATTCTCAAGCAAAAG
ACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGTTACATGGAGAGCAC
TGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAATTGCGAGCCAAAG
CACTGACCCTAATTCAAGCGATCGATGGTGACCAAGCAGATGGACGCGAA
GACGGCGCCATGGTTCGGGCGATCCTCAACAAGATCACCGAGTCGACACT
GGGGGAGTGTGGTCCCCAGTAGGTGGTGGCCATGCTTCATACTGCATCGT
TACTATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCTAGCAGATCTTCTC
AACCTGGATTATATTCCCTCACAGGCAATTCCATTGACGGCAAGGGCGGA
GCTAGCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAGCCATGGATCACAC
AGGCCCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGC
ACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAA
TGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCT
ACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACG
TATGGTTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AL3CAN33_47225Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47225-T1CAN33_47225-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47225-T1.cdsCAN33_47225-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47225-T1.exon3CAN33_47225-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_47225-T1.exon2CAN33_47225-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47225-T1.exon1CAN33_47225-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.9
NoteSMCOG1182:Polyprenyl synthetase
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR000092
DBxrefPFAM:PF00348
Productfarnesyltranstransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3151985..3153219 -
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