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CAN33_47300-T1, CAN33_47300-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47300-T1
Unique NameCAN33_47300-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3203622..3205251-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47300-T1 ID=CAN33_47300-T1|Name=CAN33_47300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1630bp|location=Sequence derived from alignment at NKJJ01000022.1:3203622..3205251- (Aspergillus niger FDAARGOS_311)
ATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGAGTATTCATTCCCCCG
AGCCTTCAACTCGAAATTAGAGAATAATGTCACTAATAGTCCGTCTTCTT
TATCCTCAGGTGTCAACAGCTATGACTGGGGTAGGACATCCCCGCATCCT
GGATTGGTCCGCCCGTTGCGTTTGCTGAAGCTGGTCTAGGCAAGATTGGT
CATGAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTT
CTCCATAGAACCTGAGAAGCCGTATGCAGAGGTTCGCTCCCTGAATTCTT
GATGTTCTCATGGCGGTAAACTGACCCGGTGACGTATAGTTGTGGATGGG
CACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCC
TCGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAG
CGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAA
GGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTC
ATGCCCGGGACGCCCGAAACTATCCAGGTAACCTATATAATTCTATCTGA
TAACAATCGCAACTCTGATCATCGCTTTATAGATGATAATCACAAACCCG
AAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCG
CTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTT
AGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTG
AAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGC
TCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGC
CACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTA
CTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCT
GCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATT
CGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGT
TCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAA
TGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTT
CAAGGACGTTGATACACTCACCGAAATGCTGACATACTCCTATGCGCCAA
TTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAAT
GCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGAT
TGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAG
CAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGA
ACTGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTA
TGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCA
GTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACG
GGCAAGGAGGACATGGTGAATGGAAACTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3203622..3205251-

>CAN33_47300-T1 ID=CAN33_47300-T1|Name=CAN33_47300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6900bp|location=Sequence derived from alignment at NKJJ01000022.1:3203622..3205251- (Aspergillus niger FDAARGOS_311)
ATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGA
CTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCAGT
CGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGAGA
GTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGA
AACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCACC
GGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGATT
CTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGC
AACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACGGACAATTCCC
TAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCTGG
CACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATC
TCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGGGC
GGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCTGA
CATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTAT
CCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCTCT
TCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCTGA
AGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATC
CTGATATGCACAGGCGGAACTGGGAAGATTACGGTCGGCCACAAGACTGA
GGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTGTA
TCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAG
GCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAGTT
GTGGATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGC
GAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAA
GTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTC
TGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTG
AAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGGCAAGATTGGTCAT
GAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTC
CATAGAACCTGAGAAGCCGTATGCAGAGGTGTCAACAGCTATGACTGGGA
TGCAGGTACCGTTGCTTCGCCTTCAGTGTGATGATAATCACAAACCCGAA
ATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCGCT
GGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAG
TCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTGAA
GACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGCTC
CCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCA
CCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTACT
TCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCTGC
CATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCG
TGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGTTC
TTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAATG
CATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCA
AGGACGTTGATACACTCACCGAAATGCTGACATACTCCTATGCGCCAATT
GAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAATGC
CTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTG
AAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAGCA
ACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGAAC
TGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATG
TATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCAGT
GGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACGGG
CAAGGAGGACATGGTGAATGGAAACTAGTTGTGGATGGGCACCCATCCTT
CCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTC
CAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGG
GAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTA
TCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGAC
GCCCGAAACTATCCAGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTA
TGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGT
ATGCAGAGGTGTCAACAGCTATGACTGGGATGCAGGTACCGTTGCTTCGC
CTTCAGTGTGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCC
GTTCGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCC
TTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAAT
CAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAA
AATGGCAAGAAACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGA
AGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCG
GCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGAC
GAATCCGAGCAACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACG
GACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTT
GTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCA
TGCATACATCTCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACG
TTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACC
GAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCC
GACCGACTATCCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTT
CATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAG
ACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGG
TCCCAGCATCCTGATATGCACAGGCGGAACTGGGAAGATTACGGTCGGCC
ACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAAC
GCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTAC
CACATATAAGGCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATG
GAAACTAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTC
GAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGAT
CTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCA
AGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAG
AAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGGCAA
GATTGGTCATGAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCT
CCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGGTGTCAACAGCT
ATGACTGGGATGCAGGTACCGTTGCTTCGCCTTCAGTGTGATGATAATCA
CAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCT
TCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTC
CGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAA
GGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACG
CGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATT
GAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATAC
ATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCG
AATTGGCTGCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATC
GGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGA
AGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACA
TTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACT
CCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCTGACATACTCCTA
TGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCG
TTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGAC
CCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGG
GGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCA
CAGGCGGAACTGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAG
GAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAG
TACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTG
ATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAGTTGTGGATGGGC
ACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCT
CGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAGC
GATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAG
GCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCA
TGCCCGGGACGCCCGAAACTATCCAGGCAAGATTGGTCATGAGTCTGCTG
CCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCT
GAGAAGCCGTATGCAGAGGTGTCAACAGCTATGACTGGGATGCAGGTACC
GTTGCTTCGCCTTCAGTGTGATGATAATCACAAACCCGAAATGACAATTG
CGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAATC
GTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCA
AGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGG
ATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGCTCCCTATTCACA
TCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCT
GATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAGCA
CTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCTGCCATTATCGCT
CGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTT
CCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTG
ATGACATCCATGCATACATCTCTGGAGACATTATCGAATGCATGGCGTCG
TCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGA
TACACTCACCGAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAA
AGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAATGCCTCCGCCTAC
TCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAG
TGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACG
CACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGAACTGGGAAGATT
ACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGT
GGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGG
ATGTGTTTACCACATATAAGGCATTCTGTGATCTGACGGGCAAGGAGGAC
ATGGTGAATGGAAACTAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTC
CAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACC
AGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCT
TTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCA
TCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACT
ATCCAGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTATGCCGCCATT
ACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGGT
GTCAACAGCTATGACTGGGATGCAGGTACCGTTGCTTCGCCTTCAGTGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009298GDP-mannose biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004476mannose-6-phosphate isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMI1CAN33_47300Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47300-T1CAN33_47300-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47300-T1.cdsCAN33_47300-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47300-T1.exon5CAN33_47300-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_47300-T1.exon4CAN33_47300-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_47300-T1.exon3CAN33_47300-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_47300-T1.exon2CAN33_47300-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47300-T1.exon1CAN33_47300-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR018050
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR001250
DBxrefInterPro:IPR016305
DBxrefPFAM:PF01238
ProductMannose-6-phosphate isomerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3203622..3205251 -
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