You are here

CAN33_4740-T1, CAN33_4740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4740-T1
Unique NameCAN33_4740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:624439..625266+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4740-T1 ID=CAN33_4740-T1|Name=CAN33_4740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=828bp|location=Sequence derived from alignment at NKJJ01000019.1:624439..625266+ (Aspergillus niger FDAARGOS_311)
ATGGCCGCTGCAATTAAGGCAATCAATGCGAAGATCCGGTCTAACAAGGC CCTGGATTACTTCTGCTCTACCCGTACGTTCAATCCTCACCGTTACCCTC CCCGTGTTCCTGACCGAGATCGGCCGACAAGAATGCCTGCCGTAAGACAT GTTCTGAAGGGGTTGTTGAGCAACTTCAGTGAATCCTTTCTGCACATGTT ATCGGTCACGATCACGAAGCTCTTTCCTTAGTCAAGTCTAATTCACAAAA AGCAATTTCTCTTGGCTAACAATGATCTTAACTAGACTTCTGGGGCCCTG CCTCCAACTTTGGTATCCCCATTGCAGCGGTGATGGATACTCAAAAGGAC CCTGAAATGTACGTCGCTACAATTACCTCCCCCCACTCCGCGGTGTTCTT TCTCTTGAACATAAATGTACATCGAATCAAGTTTTGAGAGCTTATCCAGA TAGCCCAAACGAACATACCAGCACCTTCCTAACCAATCATACGATTGCTA ACTGTCATTCTATCTACACAGTATCTCCGGCCAAATGACCGGTGCTCTCG TTATCTACTCGGGAACCTTCATGCGCTACGCTCTTGCCGTCTCTCCCAAG AACTATCTCCTGTTCGCCTGCCACGCCGTCAACTTCTCCGCTCAGCTTAC TCAAGGATACCGCTACCTGAACTACTGGAAGTACGTCACGGAATGGCTCT TTCTTCCCACCCACATTGAGAACTACAAGGGTAATGCTGACTTTTGCATC AACAGCTGGGGAGGCCGTGAAGCTCAGCTCGCCGAGGCTGCCAAGCAGGG CAAGGATGCCACCGAGGCTGGCGCTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:624439..625266+

>CAN33_4740-T1 ID=CAN33_4740-T1|Name=CAN33_4740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1359bp|location=Sequence derived from alignment at NKJJ01000019.1:624439..625266+ (Aspergillus niger FDAARGOS_311)
ATGGCCGCTGCAATTAAGGCAATCAATGCGAAGATCCGGTCTAACAAGGC
CCTGGATTACTTCTGCTCTACCCACTTCTGGGGCCCTGCCTCCAACTTTG
GTATCCCCATTGCAGCGGTGATGGATACTCAAAAGGACCCTGAAATTATC
TCCGGCCAAATGACCGGTGCTCTCGTTATCTACTCGGGAACCTTCATGCG
CTACGCTCTTGCCGTCTCTCCCAAGAACTATCTCCTGTTCGCCTGCCACG
CCGTCAACTTCTCCGCTCAGCTTACTCAAGGATACCGCTACCTGAACTAC
TGGAAGTACGTCACGGAATGGCTCTTTCTTCCCACCCACATTGAGAACTA
CAAGGGTAATGCTGACTTTTGCATCAACAGCTGGGGAGGCCGTGAAGCTC
AGCTCGCCGAGGCTGCCAAGCAGGGCAAGGATGCCACCGAGGCTGGCGCT
TAAATGGCCGCTGCAATTAAGGCAATCAATGCGAAGATCCGGTCTAACAA
GGCCCTGGATTACTTCTGCTCTACCCACTTCTGGGGCCCTGCCTCCAACT
TTGGTATCCCCATTGCAGCGGTGATGGATACTCAAAAGGACCCTGAAATT
ATCTCCGGCCAAATGACCGGTGCTCTCGTTATCTACTCGGGAACCTTCAT
GCGCTACGCTCTTGCCGTCTCTCCCAAGAACTATCTCCTGTTCGCCTGCC
ACGCCGTCAACTTCTCCGCTCAGCTTACTCAAGGATACCGCTACCTGAAC
TACTGGAAGTACGTCACGGAATGGCTCTTTCTTCCCACCCACATTGAGAA
CTACAAGGGTAATGCTGACTTTTGCATCAACAGCTGGGGAGGCCGTGAAG
CTCAGCTCGCCGAGGCTGCCAAGCAGGGCAAGGATGCCACCGAGGCTGGC
GCTTAAATGGCCGCTGCAATTAAGGCAATCAATGCGAAGATCCGGTCTAA
CAAGGCCCTGGATTACTTCTGCTCTACCCACTTCTGGGGCCCTGCCTCCA
ACTTTGGTATCCCCATTGCAGCGGTGATGGATACTCAAAAGGACCCTGAA
ATTATCTCCGGCCAAATGACCGGTGCTCTCGTTATCTACTCGGGAACCTT
CATGCGCTACGCTCTTGCCGTCTCTCCCAAGAACTATCTCCTGTTCGCCT
GCCACGCCGTCAACTTCTCCGCTCAGCTTACTCAAGGATACCGCTACCTG
AACTACTGGAAGTACGTCACGGAATGGCTCTTTCTTCCCACCCACATTGA
GAACTACAAGGGTAATGCTGACTTTTGCATCAACAGCTGGGGAGGCCGTG
AAGCTCAGCTCGCCGAGGCTGCCAAGCAGGGCAAGGATGCCACCGAGGCT
GGCGCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Biological Process
TermDefinition
GO:0006850mitochondrial pyruvate transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4740CAN33_4740Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4740-T1.exon1CAN33_4740-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4740-T1.exon2CAN33_4740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4740-T1.exon3CAN33_4740-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4740-T1.cdsCAN33_4740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4740-T1CAN33_4740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR005336
DBxrefPFAM:PF03650
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:624439..625266 +