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CAN33_47415-T1, CAN33_47415-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47415-T1
Unique NameCAN33_47415-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3274573..3275464-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47415-T1 ID=CAN33_47415-T1|Name=CAN33_47415-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=892bp|location=Sequence derived from alignment at NKJJ01000022.1:3274573..3275464- (Aspergillus niger FDAARGOS_311)
ATGGCTAAGGAAAGGACCGAGAAGAAGGACAAGCGCGAGAAGAAGGAGAA
GCGCGCGGAGAAGGACGGCGTCTCCAAGACCAGCAAGAAGGAGAAGAAGG
AGAAGAAGGACAAGGTCGCCCTCGCCGACGCGGTCGAGAAGGAGCTCACT
ACTAAGGTTCTCGATGGCATTGACCAGGCTGCCACTGAGGCTCCTGTCAA
TGGCGCTGAGGCCGAGCACATGGACGTCGACAGCCGCCCCGTTGGCGCCA
TTGTTCCTTTTGCCAGCCCTCTGGTGGAAGACAAGTCTGCCAAGAAGGTC
CTGAAGAGCGTCAAGAAGGGTAAGAAACTTCCTTTTGTATTTTCCATATG
TTTGTTAAGAGCGCTCGGTCTGGGTCCTAAGGAGATGGAGTGTGGATTCG
ATCCGGTCTCAGCTTCTGGCCCTGAGAGATTACGATTGCCCCGTTTGGCA
TTGACTGCGCATCTATCTATCATCGAATGAATATGTGCTAATGTATTGAC
TTCTAATAGCTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGAGGTT
GTCAAGGCTCTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCATCGG
TGTTCCCAACGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATGGACG
TTATCTCGCACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTACGTC
TTCGTCACATCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAACGCCC
CACCAGTGTTGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAGAAGA
AGGACGGTGAGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGAATTG
GCCAAGCTCGCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3274573..3275464-

>CAN33_47415-T1 ID=CAN33_47415-T1|Name=CAN33_47415-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1845bp|location=Sequence derived from alignment at NKJJ01000022.1:3274573..3275464- (Aspergillus niger FDAARGOS_311)
CTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGAGGTTGTCAAGGCT
CTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCATCGGTGTTCCCAA
CGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATGGACGTTATCTCGC
ACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTACGTCTTCGTCACA
TCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAACGCCCCACCAGTGT
TGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAGAAGAAGGACGGTG
AGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGAATTGGCCAAGCTC
GCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAGTTCTCGATGGCATTGA
CCAGGCTGCCACTGAGGCTCCTGTCAATGGCGCTGAGGCCGAGCACATGG
ACGTCGACAGCCGCCCCGTTGGCGCCATTGTTCCTTTTGCCAGCCCTCTG
GTGGAAGACAAGTCTGCCAAGAAGGTCCTGAAGAGCGTCAAGAAGGATGG
CTAAGGAAAGGACCGAGAAGAAGGACAAGCGCGAGAAGAAGGAGAAGCGC
GCGGAGAAGGACGGCCTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAG
GAGGTTGTCAAGGCTCTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAG
CATCGGTGTTCCCAACGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGA
TGGACGTTATCTCGCACATCCCTGTCCTGTGCGAGGACCACGGTATCCCC
TACGTCTTCGTCACATCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAA
ACGCCCCACCAGTGTTGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCA
AGAAGAAGGACGGTGAGGATGATGGAGAGGACTTCACCGAGGTGTTTGAG
GAATTGGCCAAGCTCGCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAGT
TCTCGATGGCATTGACCAGGCTGCCACTGAGGCTCCTGTCAATGGCGCTG
AGGCCGAGCACATGGACGTCGACAGCCGCCCCGTTGGCGCCATTGTTCCT
TTTGCCAGCCCTCTGGTGGAAGACAAGTCTGCCAAGAAGGTCCTGAAGAG
CGTCAAGAAGGATGGCTAAGGAAAGGACCGAGAAGAAGGACAAGCGCGAG
AAGAAGGAGAAGCGCGCGGAGAAGGACGGCCTGCCGTCAACAAGTGCCTG
AAGCGCGGTGTCAAGGAGGTTGTCAAGGCTCTCCGCAAGTCGCCCATCCC
CGCTGCCAATGCCAGCATCGGTGTTCCCAACGGTGTCGTCATTCTCGCCG
CCGATATCTCGCCGATGGACGTTATCTCGCACATCCCTGTCCTGTGCGAG
GACCACGGTATCCCCTACGTCTTCGTCACATCCCGAGCTGAGCTCGGCAA
CTCCGCCGCCACGAAACGCCCCACCAGTGTTGTGATGGTCGTGCCCAAGT
CGGCTTCCAAGGGCAAGAAGAAGGACGGTGAGGATGATGGAGAGGACTTC
ACCGAGGTGTTTGAGGAATTGGCCAAGCTCGCCCAGAAGGAGGCCAAGAA
GGTGAACCTGTGAGTTCTCGATGGCATTGACCAGGCTGCCACTGAGGCTC
CTGTCAATGGCGCTGAGGCCGAGCACATGGACGTCGACAGCCGCCCCGTT
GGCGCCATTGTTCCTTTTGCCAGCCCTCTGGTGGAAGACAAGTCTGCCAA
GAAGGTCCTGAAGAGCGTCAAGAAGGATGGCTAAGGAAAGGACCGAGAAG
AAGGACAAGCGCGAGAAGAAGGAGAAGCGCGCGGAGAAGGACGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47415CAN33_47415Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47415-T1CAN33_47415-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47415-T1.cdsCAN33_47415-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47415-T1.exon3CAN33_47415-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_47415-T1.exon2CAN33_47415-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47415-T1.exon1CAN33_47415-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR004037
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR004038
DBxrefPFAM:PF01248
ProductRibosomal L7Ae/L30e/S12e/Gadd45 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3274573..3275464 -
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