You are here

Home

CAN33_47500-T1, CAN33_47500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47500-T1
Unique NameCAN33_47500-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3335045..3337216+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47500-T1 ID=CAN33_47500-T1|Name=CAN33_47500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2172bp|location=Sequence derived from alignment at NKJJ01000022.1:3335045..3337216+ (Aspergillus niger FDAARGOS_311)
ATGTTCATGCACCCTGCTGCACGTAAGGGTTTGATCACTGAACCAACTTC
CATCCCGTATCTCAACTACCAAGATCCCGTTTGCATACAAGACGACCAGA
TCCTCGACTACTCTCAAGAGACCGCTCTCCACTTTCTCGGCCAACAACAA
CCTCGACTGCAGACTCCTTTCCAGTACCAGCCGGATTTGCAGTTCGTCTC
TCCGCCGTCTTCCGCTCCCTCCTCCCCTACTTCCTCACCCGCCTCCACCA
TTTCCCACTATCCTGCGACAACAGCGGTTGCCGCAGATTACTCTTCTGCC
GTCTTTGACGGCAATTCCTTCGAGGCCCCTTCGATGACACCTTCTTCCTC
CTACAACCCTTCCATCAACATCCATCACTCGGCATCACCACCTTCACAAG
CCTACCTTCCCCAATATACTCAGCCCTACTACTTCAACGGTAACCCGATG
TTGGCACAACAATCTGTCGCGAACAACCACGGTTGGGAAGGCAACTTGCA
GCTGTTGGGCCCAGCTCGCCTCCAGAACAATCTACTGAAAGCCTCTGCTA
GTCCATCATCGAGCCGATCTGCACCTGCTGGCAGTTCTTACTCGAGGACA
AACGGTGTGGCCAAGCCTCTGCCTACCCCCGTCCAGACCCCCGTCCAGAC
CTTCCAAGATGGTAGCCAGACCGACGCCGATCTTGCTATGAGACGGGCCT
TTCTAGAGCAGCAGCAGCAACAGCAACAGCAACAGCAAAAGCAATCTCGT
CACCAGCATCAGTCTAGCGACTACTCACTAGCGCCTTCTGTATCGAGCGT
GAGTCACAACTCGCCAGTGACTCCTCACACGGGCTTCGAAGACCTCGATG
ACGCATCGAAGGCGATTGTAAATGGTGAGAACCGGTTTCCCGACGTAGAC
AAGTGGATGGATGATTACTTACGCCTCGATGCGCTTTCAGACTACACCAA
CCACAACGCGAACAACAACATGACCATTGGCATTCCCAAGCTCAACCGCA
CGATTTCCGACATTTACCAGGACGAGCTTTACAACCCCGCCATGATGTCT
ACTCCGCAGATGGCTAAGCCCGCGACGAACCAGCAAAATCTCCTGACACC
GTCGTTCCGGAATGTGATTGCCGATCGCCTTCAGGCTGCCAACCAGGGCC
ACTTGACCGCACGGTCCCAGTCTCCCATGGTGAGCATGCCGCGCGATCGC
TCGCCCTTCCGTCAGAACTCTCCCCTGGCCGCTGAGTACAACCATGCGGC
CTTGCAACAGCCTCAGATGGCCACTAGCGCCCCTACATCCCAAAATGGGG
TGAACATGGGCCAGGCGGCTCAGGGAGAGCCCAAGACGATGTCTCCCAAG
GATGCACTGTTGGACTTCAACGAGGGCGACGATACTGGATTGCCTCTGTT
CCCCCCTTCGTCACAGCCCGACTTCAATCTGGGCGATGCGCTGGGCGGAC
TCCGTCGGGAGAGTTCCGGCTCATTCCAGCCGACTCAAAACTTCACATCG
ATGGAGTCGTTCCCCAGCCAGTACGCTACGCAGGGTACATCCCAGCAGTT
CCCCTTTGGTCAACAGCAGCAGAATCACCGCCAGCCACAGCAACATAACA
CCAATCTGCTGCACCAGACTCCCGAGTTCCCCGCATCTCTTCCTCGGTTC
GACTCTACGGGTAGTGATGTGCTGCCCTCGACTGAGATGACCTCCCCACA
GGCATCGGCGAAGATGCCGATGCAGGCACCGCCGGTCAAGGAAGAGATCA
GTCGACCGGAAAATACCTCGGCCGACGGAGGTACCTACACCTGCACATAC
CACGGCTGCACCCTACGCTTTGAGACTCCGGCCAAGCTACAAAAGCACAA
GCGTGAGGCGCACCGTCAGACCACCCCTGGCGGTCATCTGGTCACTCGCG
ATACGTCGGCCCGCAATTCGCAGGCCGGACCACACAAGTGTGAGCGCATC
AATCCGTCTACGGGCAAGCCGTGCAACTCTGTGTTCTCACGGCCCTACGA
TCTTACACGGCACGAGGACACGATCCACAATGCTCGCAAGCAAAAGGTGC
GGTGTCATCTGTGCACGGAGGAGAAGACCTTCTCGCGCAATGATGCGCTC
ACCCGGCACATGCGCGTGGTGCATCCGGAGGTTGACTGGCCCGGCAAGCA
ACGGCGCAGAGGGCGGGAGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:3335045..3337216+

>CAN33_47500-T1 ID=CAN33_47500-T1|Name=CAN33_47500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5724bp|location=Sequence derived from alignment at NKJJ01000022.1:3335045..3337216+ (Aspergillus niger FDAARGOS_311)
ATGTTCATGCACCCTGCTGCACGTAAGGGTTTGATCACTGAACCAACTTC
CATCCCGTATCTCAACTACCAAGATCCCGTTTGCATACAAGACGACCAGA
TCCTCGACTACTCTCAAGAGACCGCTCTCCACTTTCTCGGCCAACAACAA
CCTCGACTGCAGACTCCTTTCCAGTACCAGCCGGATTTGCAGTTCGTCTC
TCCGCCGTCTTCCGCTCCCTCCTCCCCTACTTCCTCACCCGCCTCCACCA
TTTCCCACTATCCTGCGACAACAGCGGTTGCCGCAGATTACTCTTCTGCC
GTCTTTGACGGCAATTCCTTCGAGGCCCCTTCGATGACACCTTCTTCCTC
CTACAACCCTTCCATCAACATCCATCACTCGGCATCACCACCTTCACAAG
CCTACCTTCCCCAATATACTCAGCCCTACTACTTCAACGGTAACCCGATG
TTGGCACAACAATCTGTCGCGAACAACCACGGTTGGGAAGGCAACTTGCA
GCTGTTGGGCCCAGCTCGCCTCCAGAACAATCTACTGAAAGCCTCTGCTA
GTCCATCATCGAGCCGATCTGCACCTGCTGGCAGTTCTTACTCGAGGACA
AACGGTGTGGCCAAGCCTCTGCCTACCCCCGTCCAGACCCCCGTCCAGAC
CTTCCAAGATGCGCCTTCTGTATCGAGCGTGAGTCACAACTCGCCAGTGA
CTCCTCACACGGGCTTCGAAGACCTCGATGACGCATCGAAGGCGATTGTA
AATGGTGAGAACCGGTTTCCCGACGTAGACAAGTGGATGGATGATTACTT
ACGCCTCGATGCGCTTTCAGACTACACCAACCACAACGCGAACAACAACA
TGACCATTGGCATTCCCAAGCTCAACCGCACGATTTCCGACATTTACCAG
GACGAGCTTTACAACCCCGCCATGATGTCTACTCCGCAGATGGCTAAGCC
CGCGACGAACCAGCAAAATCTCCTGACACCGTCGTTCCGGAATGTGATTG
CCGATCGCCTTCAGGCTGCCAACCAGGGCCACTTGACCGCACGGTCCCAG
TCTCCCATGGTGAGCATGCCGCGCGATCGCTCGCCCTTCCGTCAGAACTC
TCCCCTGGCCGCTGAGTACAACCATGCGGCCTTGCAACAGCCTCAGATGG
CCACTAGCGCCCCTACATCCCAAAATGGGGTGAACATGGGCCAGGCGGCT
CAGGGAGAGCCCAAGACGATGTCTCCCAAGGATGCACTGTTGGACTTCAA
CGAGGGCGACGATACTGGATTGCCTCTGTTCCCCCCTTCGTCACAGCCCG
ACTTCAATCTGGGCGATGCGCTGGGCGGACTCCGTCGGGAGAGTTCCGGC
TCATTCCAGCCGACTCAAAACTTCACATCGATGGAGTCGTTCCCCAGCCA
TGATGTGCTGCCCTCGACTGAGATGACCTCCCCACAGGCATCGGCGAAGA
TGCCGATGCAGGCACCGCCGGTCAAGGAAGAGATCAGTCGACCGGAAAAT
ACCTCGGCCGACGGAGGTACCTACACCTGCACATACCACGGCTGCACCCT
ACGCTTTGAGACTCCGGCCAAGCTACAAAAGCACAAGCGTGAGGCGCACC
GTCAGACCACCCCTGGCGGTCATCTGGTCACTCGCGATACGTCGGCCCGC
AATTCGCAGGCCGGACCACACAAGTGTGAGCGCATCAATCCGTCTACGGG
CAAGCCGTGCAACTCTGTGTTCTCACGGCCCTACGATCTTACACGGCACG
AGGACACGATCCACAATGCTCGCAAGCAAAAGGTGCGGTGTCATCTGTGC
ACGGAGGAGAAGACCTTCTCGCGCAATGATGCGCTCACCCGGCACATGCG
CGTGGTGCATCCGGAGGTTGACTGGCCCGGCAAGCAACGGCGCAGAGGGC
GGGAGTGAATGTTCATGCACCCTGCTGCACGTAAGGGTTTGATCACTGAA
CCAACTTCCATCCCGTATCTCAACTACCAAGATCCCGTTTGCATACAAGA
CGACCAGATCCTCGACTACTCTCAAGAGACCGCTCTCCACTTTCTCGGCC
AACAACAACCTCGACTGCAGACTCCTTTCCAGTACCAGCCGGATTTGCAG
TTCGTCTCTCCGCCGTCTTCCGCTCCCTCCTCCCCTACTTCCTCACCCGC
CTCCACCATTTCCCACTATCCTGCGACAACAGCGGTTGCCGCAGATTACT
CTTCTGCCGTCTTTGACGGCAATTCCTTCGAGGCCCCTTCGATGACACCT
TCTTCCTCCTACAACCCTTCCATCAACATCCATCACTCGGCATCACCACC
TTCACAAGCCTACCTTCCCCAATATACTCAGCCCTACTACTTCAACGGTA
ACCCGATGTTGGCACAACAATCTGTCGCGAACAACCACGGTTGGGAAGGC
AACTTGCAGCTGTTGGGCCCAGCTCGCCTCCAGAACAATCTACTGAAAGC
CTCTGCTAGTCCATCATCGAGCCGATCTGCACCTGCTGGCAGTTCTTACT
CGAGGACAAACGGTGTGGCCAAGCCTCTGCCTACCCCCGTCCAGACCCCC
GTCCAGACCTTCCAAGATGCGCCTTCTGTATCGAGCGTGAGTCACAACTC
GCCAGTGACTCCTCACACGGGCTTCGAAGACCTCGATGACGCATCGAAGG
CGATTGTAAATGGTGAGAACCGGTTTCCCGACGTAGACAAGTGGATGGAT
GATTACTTACGCCTCGATGCGCTTTCAGACTACACCAACCACAACGCGAA
CAACAACATGACCATTGGCATTCCCAAGCTCAACCGCACGATTTCCGACA
TTTACCAGGACGAGCTTTACAACCCCGCCATGATGTCTACTCCGCAGATG
GCTAAGCCCGCGACGAACCAGCAAAATCTCCTGACACCGTCGTTCCGGAA
TGTGATTGCCGATCGCCTTCAGGCTGCCAACCAGGGCCACTTGACCGCAC
GGTCCCAGTCTCCCATGGTGAGCATGCCGCGCGATCGCTCGCCCTTCCGT
CAGAACTCTCCCCTGGCCGCTGAGTACAACCATGCGGCCTTGCAACAGCC
TCAGATGGCCACTAGCGCCCCTACATCCCAAAATGGGGTGAACATGGGCC
AGGCGGCTCAGGGAGAGCCCAAGACGATGTCTCCCAAGGATGCACTGTTG
GACTTCAACGAGGGCGACGATACTGGATTGCCTCTGTTCCCCCCTTCGTC
ACAGCCCGACTTCAATCTGGGCGATGCGCTGGGCGGACTCCGTCGGGAGA
GTTCCGGCTCATTCCAGCCGACTCAAAACTTCACATCGATGGAGTCGTTC
CCCAGCCATGATGTGCTGCCCTCGACTGAGATGACCTCCCCACAGGCATC
GGCGAAGATGCCGATGCAGGCACCGCCGGTCAAGGAAGAGATCAGTCGAC
CGGAAAATACCTCGGCCGACGGAGGTACCTACACCTGCACATACCACGGC
TGCACCCTACGCTTTGAGACTCCGGCCAAGCTACAAAAGCACAAGCGTGA
GGCGCACCGTCAGACCACCCCTGGCGGTCATCTGGTCACTCGCGATACGT
CGGCCCGCAATTCGCAGGCCGGACCACACAAGTGTGAGCGCATCAATCCG
TCTACGGGCAAGCCGTGCAACTCTGTGTTCTCACGGCCCTACGATCTTAC
ACGGCACGAGGACACGATCCACAATGCTCGCAAGCAAAAGGTGCGGTGTC
ATCTGTGCACGGAGGAGAAGACCTTCTCGCGCAATGATGCGCTCACCCGG
CACATGCGCGTGGTGCATCCGGAGGTTGACTGGCCCGGCAAGCAACGGCG
CAGAGGGCGGGAGTGAATGTTCATGCACCCTGCTGCACGTAAGGGTTTGA
TCACTGAACCAACTTCCATCCCGTATCTCAACTACCAAGATCCCGTTTGC
ATACAAGACGACCAGATCCTCGACTACTCTCAAGAGACCGCTCTCCACTT
TCTCGGCCAACAACAACCTCGACTGCAGACTCCTTTCCAGTACCAGCCGG
ATTTGCAGTTCGTCTCTCCGCCGTCTTCCGCTCCCTCCTCCCCTACTTCC
TCACCCGCCTCCACCATTTCCCACTATCCTGCGACAACAGCGGTTGCCGC
AGATTACTCTTCTGCCGTCTTTGACGGCAATTCCTTCGAGGCCCCTTCGA
TGACACCTTCTTCCTCCTACAACCCTTCCATCAACATCCATCACTCGGCA
TCACCACCTTCACAAGCCTACCTTCCCCAATATACTCAGCCCTACTACTT
CAACGGTAACCCGATGTTGGCACAACAATCTGTCGCGAACAACCACGGTT
GGGAAGGCAACTTGCAGCTGTTGGGCCCAGCTCGCCTCCAGAACAATCTA
CTGAAAGCCTCTGCTAGTCCATCATCGAGCCGATCTGCACCTGCTGGCAG
TTCTTACTCGAGGACAAACGGTGTGGCCAAGCCTCTGCCTACCCCCGTCC
AGACCCCCGTCCAGACCTTCCAAGATGCGCCTTCTGTATCGAGCGTGAGT
CACAACTCGCCAGTGACTCCTCACACGGGCTTCGAAGACCTCGATGACGC
ATCGAAGGCGATTGTAAATGGTGAGAACCGGTTTCCCGACGTAGACAAGT
GGATGGATGATTACTTACGCCTCGATGCGCTTTCAGACTACACCAACCAC
AACGCGAACAACAACATGACCATTGGCATTCCCAAGCTCAACCGCACGAT
TTCCGACATTTACCAGGACGAGCTTTACAACCCCGCCATGATGTCTACTC
CGCAGATGGCTAAGCCCGCGACGAACCAGCAAAATCTCCTGACACCGTCG
TTCCGGAATGTGATTGCCGATCGCCTTCAGGCTGCCAACCAGGGCCACTT
GACCGCACGGTCCCAGTCTCCCATGGTGAGCATGCCGCGCGATCGCTCGC
CCTTCCGTCAGAACTCTCCCCTGGCCGCTGAGTACAACCATGCGGCCTTG
CAACAGCCTCAGATGGCCACTAGCGCCCCTACATCCCAAAATGGGGTGAA
CATGGGCCAGGCGGCTCAGGGAGAGCCCAAGACGATGTCTCCCAAGGATG
CACTGTTGGACTTCAACGAGGGCGACGATACTGGATTGCCTCTGTTCCCC
CCTTCGTCACAGCCCGACTTCAATCTGGGCGATGCGCTGGGCGGACTCCG
TCGGGAGAGTTCCGGCTCATTCCAGCCGACTCAAAACTTCACATCGATGG
AGTCGTTCCCCAGCCATGATGTGCTGCCCTCGACTGAGATGACCTCCCCA
CAGGCATCGGCGAAGATGCCGATGCAGGCACCGCCGGTCAAGGAAGAGAT
CAGTCGACCGGAAAATACCTCGGCCGACGGAGGTACCTACACCTGCACAT
ACCACGGCTGCACCCTACGCTTTGAGACTCCGGCCAAGCTACAAAAGCAC
AAGCGTGAGGCGCACCGTCAGACCACCCCTGGCGGTCATCTGGTCACTCG
CGATACGTCGGCCCGCAATTCGCAGGCCGGACCACACAAGTGTGAGCGCA
TCAATCCGTCTACGGGCAAGCCGTGCAACTCTGTGTTCTCACGGCCCTAC
GATCTTACACGGCACGAGGACACGATCCACAATGCTCGCAAGCAAAAGGT
GCGGTGTCATCTGTGCACGGAGGAGAAGACCTTCTCGCGCAATGATGCGC
TCACCCGGCACATGCGCGTGGTGCATCCGGAGGTTGACTGGCCCGGCAAG
CAACGGCGCAGAGGGCGGGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47500CAN33_47500Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47500-T1.exon1CAN33_47500-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_47500-T1.exon2CAN33_47500-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47500-T1.exon3CAN33_47500-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47500-T1.cdsCAN33_47500-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47500-T1CAN33_47500-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
ProductZinc finger C2H2 type family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3335045..3337216 +
Powered by Drupal