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CAN33_47510-T1, CAN33_47510-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47510-T1
Unique NameCAN33_47510-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3350711..3351184-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47510-T1 ID=CAN33_47510-T1|Name=CAN33_47510-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=474bp|location=Sequence derived from alignment at NKJJ01000022.1:3350711..3351184- (Aspergillus niger FDAARGOS_311)
ATGACTGGCCGTAAGTTCATCACTTCCCATCATGGGCTATCTATCATCTC
GATAGATTGTCCACTGCCGTCTACTCCATGATCAACAGTGACTGACTTGA
CGCGTCTCAACAGGTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGC
CAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAGGGTATCACTAAGC
CCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCC
ATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGT
CATCCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCA
CCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGGCCGTAAGTACCAC
ACGTTTTGGCTTTTGTGTGTCCAACGCGTCTAACATGGAATTCCTCAGGT
ACCCTCTACGGTTTCGGTGGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3350711..3351184-

>CAN33_47510-T1 ID=CAN33_47510-T1|Name=CAN33_47510-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=936bp|location=Sequence derived from alignment at NKJJ01000022.1:3350711..3351184- (Aspergillus niger FDAARGOS_311)
GTACCCTCTACGGTTTCGGTGGTTAAGTGGAAAGGGTGGAAAGGGTCTCG
GCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAG
GGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAA
GCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCT
TCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTGAGCACGCCAAG
CGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGG
CCATGACTGGCCGTACCCTCTACGGTTTCGGTGGTTAAGTGGAAAGGGTG
GAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGT
GACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCG
TGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTG
TCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACT
GAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCT
TAAGAGACAGGGCCATGACTGGCCGTACCCTCTACGGTTTCGGTGGTTAA
GTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGC
AAGATCTTGCGTGACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCG
TCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGG
AGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCT
GTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGT
CGTCTATGCTCTTAAGAGACAGGGCCATGACTGGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47510CAN33_47510Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47510-T1CAN33_47510-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47510-T1.cdsCAN33_47510-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47510-T1.exon3CAN33_47510-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_47510-T1.exon2CAN33_47510-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47510-T1.exon1CAN33_47510-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR019809
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR035425
DBxrefInterPro:IPR004823
DBxrefInterPro:IPR001951
DBxrefPFAM:PF02969
DBxrefPFAM:PF15511
ProductCore histone H2A/H2B/H3/H4 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3350711..3351184 -
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