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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3352012..3352600+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_47515-T1 ID=CAN33_47515-T1|Name=CAN33_47515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=589bp|location=Sequence derived from alignment at NKJJ01000022.1:3352012..3352600+ (Aspergillus niger FDAARGOS_311)
ATGGCCCGCACTAAGCAGACTGCCCGTAAGTGCAACCTCACTGTCCTTTC
CCCTCGTGTCGTTCGACCGCGTCATGGTCGCGACACCCGTGTCTCACATG
AGGAACATCATCACTAACTATCATCTCAATATAGGTAAGTCCACTGGTGG
CAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGCTC
CCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTATGTAT
ACACTCATCATTCAAAGTGGCAAATGGCCTATCCGAACAGTCAACTAACA
GTCTACCAAAGGTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGA
GCACTGAGCTCCTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAA
ATTGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGG
TGCTCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACA
CCAACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGAC
ATCCAGCTTGCCCGCCGTCTCCGTGGTGAGCGCTCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3352012..3352600+ >CAN33_47515-T1 ID=CAN33_47515-T1|Name=CAN33_47515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1233bp|location=Sequence derived from alignment at NKJJ01000022.1:3352012..3352600+ (Aspergillus niger FDAARGOS_311)
ATGGCCCGCACTAAGCAGACTGCCCGTAAGTCCACTGGTGGCAAGGCTCC
CCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGCTCCCTCCACCG
GAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTACCGTCGCTCTGCGT
GAAATCCGTCGTTACCAGAAGAGCACTGAGCTCCTGATCCGCAAGCTGCC
CTTCCAGCGTCTTGTCCGTGAAATTGCTCAGGACTTCAAGTCGGATCTCC
GCTTCCAGTCCTCCGCCATCGGTGCTCTTCAGGAGTCCGTCGAGGCCTAC
CTCGTCTCCCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCG
TGTCACCATCCAGTCCAAGGACATCCAGCTTGCCCGCCGTCTCCGTGGTG
AGCGCTCTTAGATGGCCCGCACTAAGCAGACTGCCCGTAAGTCCACTGGT
GGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGC
TCCCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTACCG
TCGCTCTGCGTGAAATCCGTCGTTACCAGAAGAGCACTGAGCTCCTGATC
CGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAAATTGCTCAGGACTTCAA
GTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGTGCTCTTCAGGAGTCCG
TCGAGGCCTACCTCGTCTCCCTCTTCGAGGACACCAACCTGTGCGCCATC
CACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAGCTTGCCCGCCG
TCTCCGTGGTGAGCGCTCTTAGATGGCCCGCACTAAGCAGACTGCCCGTA
AGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCC
CGTAAGGCCGCTCCCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAA
GCCCGGTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGAGCACTG
AGCTCCTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAAATTGCT
CAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGTGCTCT
TCAGGAGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACACCAACC
TGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAG
CTTGCCCGCCGTCTCCGTGGTGAGCGCTCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR000164 |
| DBxref | PFAM:PF00125 |
| Product | histone H3.1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3352012..3352600 + |
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