You are here

Home

CAN33_4755-T1, CAN33_4755-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4755-T1
Unique NameCAN33_4755-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:633360..634495-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4755-T1 ID=CAN33_4755-T1|Name=CAN33_4755-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1136bp|location=Sequence derived from alignment at NKJJ01000019.1:633360..634495- (Aspergillus niger FDAARGOS_311)
ATGTCTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCAAGG
CTCGCGCCTTGCATACATGGTATGTTTGATTCCCTGACTCTAAATCGGAG
CTCTGCTTTAACTAGTATCGGAAACAGTGGTCGCGCCAAGGGAGACCAGT
CTACCTTGTCGACCAAAGCCCAGCCCAGCTAAACCTGGCATTAGCCACCA
TACAAAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATAACC
AGCCTCACTGTCGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCTTGC
TATTGAGGTAGGGAAAGGCCACCGAGCACTGACGTACCCTAGCTAAATCC
CGTCAGTGTGTCCCAGAGGACCTGGAATACAAGCGGTCCGTGATGCTGGA
GCTCGACAGTAGATCGCACTCCCAGACAATCATCGCATCAAACTCGAGCA
GTTATTCCATTACTGATATTTGCAATGGACTTTCGCTTAAGGCAGATGAT
CGTTTCGTCAACCTGCATTCCTGTAAGTCCAATACCTATCAATAACTGCC
CCACGAACAGCAACACTAACTATTATCTTTCCAAGTCTGGCCACCCGAGA
CAACAGGTAGGGAAGTCCAACGCCTAATCCAACCATGAAGAGCTGCTTCA
ACGTGCTAATCAACCATCCCTCAGCAATCGAAATTATGGGCTCCAGCCAA
ACCCGACCCGACATCATACCTCTGCTTATGAAGAAAACCCAAGACCATGG
ATTCCAACCCTTCCACGTCCGCAAATCCTCCACAGGCTACACTTTCAACC
GGTATCTCGCCAACCACGTTATATGGAACACGGGCATACATGCTAATCAT
GTATAGCATCTGGGCCGCCATCAAACGAGAGACCCTCCTGGTCCTAGAAG
AGGGCATTGCCACGCCCGAGGAGGTGGACCAAATCTACAAGTGTGTGCTG
AAAACACCCCGAGGGCCCTGCGAGCTGATGGACATTGCTGGATTGGACGT
GATTCTCGCCGTCGAGGAACATTATGCCAAGGTGAGAATGGGGATCCCCA
ATGCGCCGCGCAAGTACCTACGGGAGATGATCGATCGGGGTGACTTGGGT
GTCAAATCCGGAAATGGCTTCTTCAGTTATACTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:633360..634495-

>CAN33_4755-T1 ID=CAN33_4755-T1|Name=CAN33_4755-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5058bp|location=Sequence derived from alignment at NKJJ01000019.1:633360..634495- (Aspergillus niger FDAARGOS_311)
CATCTGGGCCGCCATCAAACGAGAGACCCTCCTGGTCCTAGAAGAGGGCA
TTGCCACGCCCGAGGAGGTGGACCAAATCTACAAGTGTGTGCTGAAAACA
CCCCGAGGGCCCTGCGAGCTGATGGACATTGCTGGATTGGACGTGATTCT
CGCCGTCGAGGAACATTATGCCAAGGTGAGAATGGGGATCCCCAATGCGC
CGCGCAAGTACCTACGGGAGATGATCGATCGGGGTGACTTGGGTGTCAAA
TCCGGAAATGGCTTCTTCAGTTATACTTAACAATCGAAATTATGGGCTCC
AGCCAAACCCGACCCGACATCATACCTCTGCTTATGAAGAAAACCCAAGA
CCATGGATTCCAACCCTTCCACGTCCGCAAATCCTCCACAGGCTACACTT
TCAACCGTCTGGCCACCCGAGACAACAGTGTGTCCCAGAGGACCTGGAAT
ACAAGCGGTCCGTGATGCTGGAGCTCGACAGTAGATCGCACTCCCAGACA
ATCATCGCATCAAACTCGAGCAGTTATTCCATTACTGATATTTGCAATGG
ACTTTCGCTTAAGGCAGATGATCGTTTCGTCAACCTGCATTCCTTGGTCG
CGCCAAGGGAGACCAGTCTACCTTGTCGACCAAAGCCCAGCCCAGCTAAA
CCTGGCATTAGCCACCATACAAAGGCTGAGAGCCTCCAATCCAGCTGGCA
AGGAAGGCAAAATAACCAGCCTCACTGTCGACGATCTGGACCCAGCGCTT
CGCGACTCCTGGCTTGCTATTGAGATGTCTAAACTCTTCAACGCTGTTAC
TCTGCTCGGTGCAGGCACTCAAGGCTCGCGCCTTGCATACATGCATCTGG
GCCGCCATCAAACGAGAGACCCTCCTGGTCCTAGAAGAGGGCATTGCCAC
GCCCGAGGAGGTGGACCAAATCTACAAGTGTGTGCTGAAAACACCCCGAG
GGCCCTGCGAGCTGATGGACATTGCTGGATTGGACGTGATTCTCGCCGTC
GAGGAACATTATGCCAAGGTGAGAATGGGGATCCCCAATGCGCCGCGCAA
GTACCTACGGGAGATGATCGATCGGGGTGACTTGGGTGTCAAATCCGGAA
ATGGCTTCTTCAGTTATACTTAACAATCGAAATTATGGGCTCCAGCCAAA
CCCGACCCGACATCATACCTCTGCTTATGAAGAAAACCCAAGACCATGGA
TTCCAACCCTTCCACGTCCGCAAATCCTCCACAGGCTACACTTTCAACCG
TCTGGCCACCCGAGACAACAGTGTGTCCCAGAGGACCTGGAATACAAGCG
GTCCGTGATGCTGGAGCTCGACAGTAGATCGCACTCCCAGACAATCATCG
CATCAAACTCGAGCAGTTATTCCATTACTGATATTTGCAATGGACTTTCG
CTTAAGGCAGATGATCGTTTCGTCAACCTGCATTCCTTGGTCGCGCCAAG
GGAGACCAGTCTACCTTGTCGACCAAAGCCCAGCCCAGCTAAACCTGGCA
TTAGCCACCATACAAAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGG
CAAAATAACCAGCCTCACTGTCGACGATCTGGACCCAGCGCTTCGCGACT
CCTGGCTTGCTATTGAGATGTCTAAACTCTTCAACGCTGTTACTCTGCTC
GGTGCAGGCACTCAAGGCTCGCGCCTTGCATACATGCATCTGGGCCGCCA
TCAAACGAGAGACCCTCCTGGTCCTAGAAGAGGGCATTGCCACGCCCGAG
GAGGTGGACCAAATCTACAAGTGTGTGCTGAAAACACCCCGAGGGCCCTG
CGAGCTGATGGACATTGCTGGATTGGACGTGATTCTCGCCGTCGAGGAAC
ATTATGCCAAGGTGAGAATGGGGATCCCCAATGCGCCGCGCAAGTACCTA
CGGGAGATGATCGATCGGGGTGACTTGGGTGTCAAATCCGGAAATGGCTT
CTTCAGTTATACTTAACAATCGAAATTATGGGCTCCAGCCAAACCCGACC
CGACATCATACCTCTGCTTATGAAGAAAACCCAAGACCATGGATTCCAAC
CCTTCCACGTCCGCAAATCCTCCACAGGCTACACTTTCAACCGTCTGGCC
ACCCGAGACAACAGTGTGTCCCAGAGGACCTGGAATACAAGCGGTCCGTG
ATGCTGGAGCTCGACAGTAGATCGCACTCCCAGACAATCATCGCATCAAA
CTCGAGCAGTTATTCCATTACTGATATTTGCAATGGACTTTCGCTTAAGG
CAGATGATCGTTTCGTCAACCTGCATTCCTTGGTCGCGCCAAGGGAGACC
AGTCTACCTTGTCGACCAAAGCCCAGCCCAGCTAAACCTGGCATTAGCCA
CCATACAAAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATA
ACCAGCCTCACTGTCGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCT
TGCTATTGAGATGTCTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAG
GCACTCAAGGCTCGCGCCTTGCATACATGCATCTGGGCCGCCATCAAACG
AGAGACCCTCCTGGTCCTAGAAGAGGGCATTGCCACGCCCGAGGAGGTGG
ACCAAATCTACAAGTGTGTGCTGAAAACACCCCGAGGGCCCTGCGAGCTG
ATGGACATTGCTGGATTGGACGTGATTCTCGCCGTCGAGGAACATTATGC
CAAGGTGAGAATGGGGATCCCCAATGCGCCGCGCAAGTACCTACGGGAGA
TGATCGATCGGGGTGACTTGGGTGTCAAATCCGGAAATGGCTTCTTCAGT
TATACTTAACAATCGAAATTATGGGCTCCAGCCAAACCCGACCCGACATC
ATACCTCTGCTTATGAAGAAAACCCAAGACCATGGATTCCAACCCTTCCA
CGTCCGCAAATCCTCCACAGGCTACACTTTCAACCGTCTGGCCACCCGAG
ACAACAGTGTGTCCCAGAGGACCTGGAATACAAGCGGTCCGTGATGCTGG
AGCTCGACAGTAGATCGCACTCCCAGACAATCATCGCATCAAACTCGAGC
AGTTATTCCATTACTGATATTTGCAATGGACTTTCGCTTAAGGCAGATGA
TCGTTTCGTCAACCTGCATTCCTTGGTCGCGCCAAGGGAGACCAGTCTAC
CTTGTCGACCAAAGCCCAGCCCAGCTAAACCTGGCATTAGCCACCATACA
AAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATAACCAGCC
TCACTGTCGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCTTGCTATT
GAGATGTCTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCA
AGGCTCGCGCCTTGCATACATGCATCTGGGCCGCCATCAAACGAGAGACC
CTCCTGGTCCTAGAAGAGGGCATTGCCACGCCCGAGGAGGTGGACCAAAT
CTACAAGTGTGTGCTGAAAACACCCCGAGGGCCCTGCGAGCTGATGGACA
TTGCTGGATTGGACGTGATTCTCGCCGTCGAGGAACATTATGCCAAGGTG
AGAATGGGGATCCCCAATGCGCCGCGCAAGTACCTACGGGAGATGATCGA
TCGGGGTGACTTGGGTGTCAAATCCGGAAATGGCTTCTTCAGTTATACTT
AACAATCGAAATTATGGGCTCCAGCCAAACCCGACCCGACATCATACCTC
TGCTTATGAAGAAAACCCAAGACCATGGATTCCAACCCTTCCACGTCCGC
AAATCCTCCACAGGCTACACTTTCAACCGTCTGGCCACCCGAGACAACAG
TGTGTCCCAGAGGACCTGGAATACAAGCGGTCCGTGATGCTGGAGCTCGA
CAGTAGATCGCACTCCCAGACAATCATCGCATCAAACTCGAGCAGTTATT
CCATTACTGATATTTGCAATGGACTTTCGCTTAAGGCAGATGATCGTTTC
GTCAACCTGCATTCCTTGGTCGCGCCAAGGGAGACCAGTCTACCTTGTCG
ACCAAAGCCCAGCCCAGCTAAACCTGGCATTAGCCACCATACAAAGGCTG
AGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATAACCAGCCTCACTGT
CGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCTTGCTATTGAGATGT
CTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCAAGGCTCG
CGCCTTGCATACATGCATCTGGGCCGCCATCAAACGAGAGACCCTCCTGG
TCCTAGAAGAGGGCATTGCCACGCCCGAGGAGGTGGACCAAATCTACAAG
TGTGTGCTGAAAACACCCCGAGGGCCCTGCGAGCTGATGGACATTGCTGG
ATTGGACGTGATTCTCGCCGTCGAGGAACATTATGCCAAGGTGAGAATGG
GGATCCCCAATGCGCCGCGCAAGTACCTACGGGAGATGATCGATCGGGGT
GACTTGGGTGTCAAATCCGGAAATGGCTTCTTCAGTTATACTTAACAATC
GAAATTATGGGCTCCAGCCAAACCCGACCCGACATCATACCTCTGCTTAT
GAAGAAAACCCAAGACCATGGATTCCAACCCTTCCACGTCCGCAAATCCT
CCACAGGCTACACTTTCAACCGTCTGGCCACCCGAGACAACAGTGTGTCC
CAGAGGACCTGGAATACAAGCGGTCCGTGATGCTGGAGCTCGACAGTAGA
TCGCACTCCCAGACAATCATCGCATCAAACTCGAGCAGTTATTCCATTAC
TGATATTTGCAATGGACTTTCGCTTAAGGCAGATGATCGTTTCGTCAACC
TGCATTCCTTGGTCGCGCCAAGGGAGACCAGTCTACCTTGTCGACCAAAG
CCCAGCCCAGCTAAACCTGGCATTAGCCACCATACAAAGGCTGAGAGCCT
CCAATCCAGCTGGCAAGGAAGGCAAAATAACCAGCCTCACTGTCGACGAT
CTGGACCCAGCGCTTCGCGACTCCTGGCTTGCTATTGAGATGTCTAAACT
CTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCAAGGCTCGCGCCTTG
CATACATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0070403NAD+ binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4755CAN33_4755Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4755-T1CAN33_4755-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4755-T1.cdsCAN33_4755-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4755-T1.exon6CAN33_4755-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_4755-T1.exon5CAN33_4755-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_4755-T1.exon4CAN33_4755-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_4755-T1.exon3CAN33_4755-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4755-T1.exon2CAN33_4755-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4755-T1.exon1CAN33_4755-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006176
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR022694
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Product3-hydroxyacyl-CoA dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:633360..634495 -
Powered by Drupal