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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3409227..3409895- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_47590-T1 ID=CAN33_47590-T1|Name=CAN33_47590-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=669bp|location=Sequence derived from alignment at NKJJ01000022.1:3409227..3409895- (Aspergillus niger FDAARGOS_311)
ATGCATGAAATACACCCCCTAACGCAGGAACAGGGGGAAGACGCGGCTCG
CGAAATGGTATGCGCCGTATAGCGTAAGTGCACCCCTACTTGGATGGAAT
CGAATGACGGCTAATATTTTTGCTTTATGATAGGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGGTTCGTTATATGCCCCGGACCACTACTATCTACTACT
ACGGCACCCCGCCGCGGAACGACATAATAATGTATGCTGGATAGGTACAT
CGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATT
CAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCT
GCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATC
CACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCT
GGACTTGGTGTTCAATTTCTACAAAGTGAGTGATGCTAGAGGCTGGTGGA
GTGGTGCCACCGGAATTGTTTGGAATGGGAAAATAGGTAGCAGACGGATG
AGCTGATGGTTGTGCAGGTATACGCTATTCTGGACGAGGTGTTCCTTGCA
GGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACA
CTTGGATAAGCTGGAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3409227..3409895- >CAN33_47590-T1 ID=CAN33_47590-T1|Name=CAN33_47590-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1680bp|location=Sequence derived from alignment at NKJJ01000022.1:3409227..3409895- (Aspergillus niger FDAARGOS_311)
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTC
GTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTT
GTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCG
AGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTT
TGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGATGCATGAAATACACCCCCTAACGCAGGAACAGGGGG
AAGACGCGGCTCGCGAAATGGTATACGCTATTCTGGACGAGGTGTTCCTT
GCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGA
ACACTTGGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATC
AGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTC
TACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGA
CAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGG
ATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTAC
AAAGATGAAGAAAAAGTCAAGCTAAAGGGCGAGATGCATGAAATACACCC
CCTAACGCAGGAACAGGGGGAAGACGCGGCTCGCGAAATGGTATACGCTA
TTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAG
GTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGTACATCG
CCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCA
AGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGC
GCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCA
CTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGG
ACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGC
GAGATGCATGAAATACACCCCCTAACGCAGGAACAGGGGGAAGACGCGGC
TCGCGAAATGGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGA
TCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGAT
AAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCA
GTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGAT
ATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTA
GCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTT
TGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAG
AAAAAGTCAAGCTAAAGGGCGAGATGCATGAAATACACCCCCTAACGCAG
GAACAGGGGGAAGACGCGGCTCGCGAAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015031 | protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR022775 |
| DBxref | InterPro:IPR016635 |
| DBxref | PFAM:PF01217 |
| Product | AP-2 complex subunit sigma |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3409227..3409895 - |
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