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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3413392..3414635+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_47605-T1 ID=CAN33_47605-T1|Name=CAN33_47605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1244bp|location=Sequence derived from alignment at NKJJ01000022.1:3413392..3414635+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCGGATCCATACGATTCGGATGCTACTATCTCATGGCATGGATG
GGACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGGTGCCAGTAG
TCCCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAACCGTTGGAC
ATGTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAAAGAAATGCT
AATTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAAC
CGTCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGCCAGCAGGTT
GTAGAAATTGTATGCTCCCTTCTCTCCTCTTGCGAACTACGCTAACTTCT
GCAGCTCGCGCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCGCTCGA
TCTCTACTGATGACTTGATCTTTCTCATTCGCCATGACAAGGCCAAGGTG
TCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAACGTCAA
AGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGGAGCTG
ATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTGCGTCG
AAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACGTAAACAG
CTTTTACTCCGTGCAGGTTCCTGAACGTGAGGACGAAGAAGACGAGGAAG
AGGAGGAACAGAACTACGCTACGCTACAGCGCCTTGCCGCAGCCGACGAA
CGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAATGTCG
CCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTGGGCCG
GATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTGATATT
CTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAGGCACT
CAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGGTGGAG
AGAACGGCGAGAGCAGTAAGAAACGTACGCGCGAGACTGGATTATTCGAT
CCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGCGAAGCG
TATCGCAAGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTTGCTGCA
TAATGGACGCCTGCCAGCTAAGATGCCATTGCGATTGGTAGGTTCTTACC
TCATCCTTGAATTGGTGGTTAGGTGCTAACTATGACAGATTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3413392..3414635+ >CAN33_47605-T1 ID=CAN33_47605-T1|Name=CAN33_47605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5295bp|location=Sequence derived from alignment at NKJJ01000022.1:3413392..3414635+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCGGATCCATACGATTCGGATGCTACTATCTCATGGCATGGATG
GGACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGGTGCCAGTAG
TCCCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAACCGTTGGAC
ATGTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAAAGAAATGCT
AATTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAAC
CGTCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGCCAGCAGGTT
GTAGAAATTCTCGCGCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCG
CTCGATCTCTACTGATGACTTGATCTTTCTCATTCGCCATGACAAGGCCA
AGGTGTCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAAC
GTCAAAGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGG
AGCTGATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTG
CGTCGAAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACAAC
TACGCTACGCTACAGCGCCTTGCCGCAGCCGACGAACGTACCAAGAACAT
GACCAAGGAAGAGTACGTCTTCTGGTCAGAATGTCGCCAGGCGTCGTTCA
CCTACCGCAAGAGCAAACGGTTCCGCGAGTGGGCCGGATTCGGTATCGTG
ACTGAGTCCAAGCCAAACGACGATATTGTTGATATTCTCGGATTCTTGAC
ATTCGAAATCGTGCAGACTCTGACTGAGGAGGCACTCAAGGTCAAGGAGC
GGGAGGATCGCGAGAAGAACCGTCGTGGAGGTGGAGAGAACGGCGAGAGC
AACTGGATTATTCGATCCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAG
ACATATTCGCGAAGCGTATCGCAAGCTGCAGGCGACTCCTAATAAGAATA
TTGCCATGTTGCTGCATAATGGACGCCTGCCAGCTAAGATGCCATTGCGA
TTGATTTGAATGTCTGCGGATCCATACGATTCGGATGCTACTATCTCATG
GCATGGATGGGACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGG
TGCCAGTAGTCCCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAA
CCGTTGGACATGTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAA
AGAAATGCTAATTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAA
CTGCCGAACCGTCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGC
CAGCAGGTTGTAGAAATTCTCGCGCGAAGCACTGCCCTAGCGACTCGTCG
CGGCGTGCGCTCGATCTCTACTGATGACTTGATCTTTCTCATTCGCCATG
ACAAGGCCAAGGTGTCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTC
CGCAAGAACGTCAAAGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGA
CTTTGCAGGAGCTGATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGC
AGGATGTTGCGTCGAAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCC
TGGGACAACTACGCTACGCTACAGCGCCTTGCCGCAGCCGACGAACGTAC
CAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAATGTCGCCAGG
CGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTGGGCCGGATTC
GGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTGATATTCTCGG
ATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAGGCACTCAAGG
TCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGGTGGAGAGAAC
GGCGAGAGCAACTGGATTATTCGATCCCCTGAGGAGGGTCGTACCCCGGT
TGAGACCAGACATATTCGCGAAGCGTATCGCAAGCTGCAGGCGACTCCTA
ATAAGAATATTGCCATGTTGCTGCATAATGGACGCCTGCCAGCTAAGATG
CCATTGCGATTGATTTGAATGTCTGCGGATCCATACGATTCGGATGCTAC
TATCTCATGGCATGGATGGGACCATCTGGAAGACGGTCAGATGACGACTG
CACCACCGGTGCCAGTAGTCCCAGCAGTCCCAGCAATCCAGCAGCAGCCA
CACGATGAACCGTTGGACATGTACATGGGAATGGATACGGAGACCAAAGA
GATCTTCAAAGAAATGCTAATTGATTTCGCTCGCAAGATGATGTTCGTCT
CTGGTGAAACTGCCGAACCGTCCGTTGAAACCACGACTCTCATTGAAGAT
ATTGTACGCCAGCAGGTTGTAGAAATTCTCGCGCGAAGCACTGCCCTAGC
GACTCGTCGCGGCGTGCGCTCGATCTCTACTGATGACTTGATCTTTCTCA
TTCGCCATGACAAGGCCAAGGTGTCGCGTCTCAAGACGTTCCTGTCCTGG
AAGGATGTCCGCAAGAACGTCAAAGACTCCGACGACAAAGGCGGCGCCGA
TGCTGCAGACTTTGCAGGAGCTGATGACCCTATTGCCGGCGGAGTCGTCG
CAGGGCCGCAGGATGTTGCGTCGAAGCCGAAGAATAAGCGTGCTCGTGTG
GGTCTCGCCTGGGACAACTACGCTACGCTACAGCGCCTTGCCGCAGCCGA
CGAACGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAAT
GTCGCCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTGG
GCCGGATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTGA
TATTCTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAGG
CACTCAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGGT
GGAGAGAACGGCGAGAGCAACTGGATTATTCGATCCCCTGAGGAGGGTCG
TACCCCGGTTGAGACCAGACATATTCGCGAAGCGTATCGCAAGCTGCAGG
CGACTCCTAATAAGAATATTGCCATGTTGCTGCATAATGGACGCCTGCCA
GCTAAGATGCCATTGCGATTGATTTGAATGTCTGCGGATCCATACGATTC
GGATGCTACTATCTCATGGCATGGATGGGACCATCTGGAAGACGGTCAGA
TGACGACTGCACCACCGGTGCCAGTAGTCCCAGCAGTCCCAGCAATCCAG
CAGCAGCCACACGATGAACCGTTGGACATGTACATGGGAATGGATACGGA
GACCAAAGAGATCTTCAAAGAAATGCTAATTGATTTCGCTCGCAAGATGA
TGTTCGTCTCTGGTGAAACTGCCGAACCGTCCGTTGAAACCACGACTCTC
ATTGAAGATATTGTACGCCAGCAGGTTGTAGAAATTCTCGCGCGAAGCAC
TGCCCTAGCGACTCGTCGCGGCGTGCGCTCGATCTCTACTGATGACTTGA
TCTTTCTCATTCGCCATGACAAGGCCAAGGTGTCGCGTCTCAAGACGTTC
CTGTCCTGGAAGGATGTCCGCAAGAACGTCAAAGACTCCGACGACAAAGG
CGGCGCCGATGCTGCAGACTTTGCAGGAGCTGATGACCCTATTGCCGGCG
GAGTCGTCGCAGGGCCGCAGGATGTTGCGTCGAAGCCGAAGAATAAGCGT
GCTCGTGTGGGTCTCGCCTGGGACAACTACGCTACGCTACAGCGCCTTGC
CGCAGCCGACGAACGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCT
GGTCAGAATGTCGCCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTC
CGCGAGTGGGCCGGATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGA
TATTGTTGATATTCTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGA
CTGAGGAGGCACTCAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGT
CGTGGAGGTGGAGAGAACGGCGAGAGCAACTGGATTATTCGATCCCCTGA
GGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGCGAAGCGTATCGCA
AGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTTGCTGCATAATGGA
CGCCTGCCAGCTAAGATGCCATTGCGATTGATTTGAATGTCTGCGGATCC
ATACGATTCGGATGCTACTATCTCATGGCATGGATGGGACCATCTGGAAG
ACGGTCAGATGACGACTGCACCACCGGTGCCAGTAGTCCCAGCAGTCCCA
GCAATCCAGCAGCAGCCACACGATGAACCGTTGGACATGTACATGGGAAT
GGATACGGAGACCAAAGAGATCTTCAAAGAAATGCTAATTGATTTCGCTC
GCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAACCGTCCGTTGAAACC
ACGACTCTCATTGAAGATATTGTACGCCAGCAGGTTGTAGAAATTCTCGC
GCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCGCTCGATCTCTACTG
ATGACTTGATCTTTCTCATTCGCCATGACAAGGCCAAGGTGTCGCGTCTC
AAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAACGTCAAAGACTCCGA
CGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGGAGCTGATGACCCTA
TTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTGCGTCGAAGCCGAAG
AATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACAACTACGCTACGCTACA
GCGCCTTGCCGCAGCCGACGAACGTACCAAGAACATGACCAAGGAAGAGT
ACGTCTTCTGGTCAGAATGTCGCCAGGCGTCGTTCACCTACCGCAAGAGC
AAACGGTTCCGCGAGTGGGCCGGATTCGGTATCGTGACTGAGTCCAAGCC
AAACGACGATATTGTTGATATTCTCGGATTCTTGACATTCGAAATCGTGC
AGACTCTGACTGAGGAGGCACTCAAGGTCAAGGAGCGGGAGGATCGCGAG
AAGAACCGTCGTGGAGGTGGAGAGAACGGCGAGAGCAACTGGATTATTCG
ATCCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGCGAAG
CGTATCGCAAGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTTGCTG
CATAATGGACGCCTGCCAGCTAAGATGCCATTGCGATTGATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006366 | transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR003195 |
| DBxref | PFAM:PF02269 |
| Product | Transcription initiation factor IID 18kD subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3413392..3414635 + |
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