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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3524521..3525392- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_47775-T1 ID=CAN33_47775-T1|Name=CAN33_47775-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=872bp|location=Sequence derived from alignment at NKJJ01000022.1:3524521..3525392- (Aspergillus niger FDAARGOS_311)
ATGAACAACAGCCCATCCGGAGGAAAGGTACACTCACCAACCCCTCACCC
CATCCCATCTATCCCATATCCCCCCCCCCCCCCACTAACAAGAAATTCAT
CATATAACAGTCCGACTACACCAACTCCACCCTCCGCCCCATAACCATCA
AACAAGCTCTGGACGCAGTCCAGCCATACCCGGAAGCGCCCTACCAAATC
GACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAACAT
CAGCTCGCAAAGCACAAACGTCACATACAAGATCGACGACGGCACAGGCG
AGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTCCATGGAC
ACGGACGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGGTAA
GGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGTTTG
GGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGTCTG
GATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTTTTT
CACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGGGTG
ATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGACTAC
GGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGTGTA
TCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGCAGT
TGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCGGGA
GATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACAGTGGATGAGCAGAC
GTGGGCGATTTTGGAGTTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3524521..3525392- >CAN33_47775-T1 ID=CAN33_47775-T1|Name=CAN33_47775-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1578bp|location=Sequence derived from alignment at NKJJ01000022.1:3524521..3525392- (Aspergillus niger FDAARGOS_311)
TCCGACTACACCAACTCCACCCTCCGCCCCATAACCATCAAACAAGCTCT
GGACGCAGTCCAGCCATACCCGGAAGCGCCCTACCAAATCGACTCCGCCG
AAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAACATCAGCTCGCAA
AGCACAAACGTCACATACAAGATCGACGACGGCACAGGCGAGATCGAAGC
CAAGCAATGGATCGACTCCATGACGGCCGACTCCATGGACACGGACGACA
TCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTG
AACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAG
GTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGC
ATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGG
CCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGC
TAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGACTACGGGGCTGGAA
AGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTT
AGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGCAGTTGATTGCGGC
GAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGC
TCACTGCGGGTGTGATCTTTTCGACAGTGGATGAGCAGACGTGGGCGATT
TTGGAGTTTTAAATGAACAACAGCCCATCCGGAGGAAAGTCCGACTACAC
CAACTCCACCCTCCGCCCCATAACCATCAAACAAGCTCTGGACGCAGTCC
AGCCATACCCGGAAGCGCCCTACCAAATCGACTCCGCCGAAATCTCCAGC
ATCTGCTTCATCGGACAAGTACGCAACATCAGCTCGCAAAGCACAAACGT
CACATACAAGATCGACGACGGCACAGGCGAGATCGAAGCCAAGCAATGGA
TCGACTCCATGACGGCCGACTCCATGGACACGGACGACATCAACAATACT
AAGGCCGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTGAACGGGTACGC
GAAGGTGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAGGTTTGTGGGTG
CGCATTGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGCATTGTCATTTG
TTGGAGGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGGCCGCCTGGGGG
TGGTGCCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGCTAAGGGGGATG
CGGCAATGGGAGGTACAGGGGATGACTACGGGGCTGGAAAGAATCTGCCT
GCTATGAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTTAGGACGGAGCC
GCAGAGCAATGAGGGGTTGCATGCGCAGTTGATTGCGGCGAAGCTGAGTT
TGCCGATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGCTCACTGCGGGT
GTGATCTTTTCGACAGTGGATGAGCAGACGTGGGCGATTTTGGAGTTTTA
AATGAACAACAGCCCATCCGGAGGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0006281 | DNA repair |
| GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR014646 |
| DBxref | InterPro:IPR014892 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF08784 |
| Product | Replication protein A C terminal family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3524521..3525392 - |
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