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CAN33_47780-T1, CAN33_47780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47780-T1
Unique NameCAN33_47780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3526168..3528684+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47780-T1 ID=CAN33_47780-T1|Name=CAN33_47780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2517bp|location=Sequence derived from alignment at NKJJ01000022.1:3526168..3528684+ (Aspergillus niger FDAARGOS_311)
ATGGGGCTGAATGCGAACTTGTTGAAGGCCATCACAAGGAAGGGTTTCTC
GGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGGTTATGGAGGATC
AGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTC
GTCATTCCCATGATTCAGAAGTTGAAGAGCCATAGCACCCAGGTTGGAGC
CCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAGACTTTGA
AGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTG
GTTGGTGGTGATAGTTTGGAGGAACAGTTCTCGATGATGGCTGGTAACCC
CGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAGGTCGAAA
TGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGAT
CGCCTGTTCGAAATGGGTTTCGCTGCTCAGTTGACCGAAATTCTTCACGG
CTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTTCCCAAAT
CCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGT
TTGGATACTGAGAGCAAGATCTCGCCGGATCTGCAGAATGCGTTCTTCTC
TGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTCCACAACG
TGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAA
GAGAACGCCAGTGGAAAGAGCTCGAAGTTCTCGAAGAAGCGGAAGCGATC
GGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCATTCCACGA
TCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTG
AACGAAGCCGGATTTGCGACATCCTACGCTTACGGTTCCCTCGACCAGAC
GGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCGAACATCC
TGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCC
AATGTCATCAACTACGACTTTCCCTCCCAAGCCAAGATCTTCGTCCACCG
TGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTACAGTCTGG
TCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGC
CGGCGACTGGTCCTCGGCCGGGAGCATGGCGACCAAGTCAACTTCGCCGA
GGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAGAGCTGCG
AGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGT
TCCGTCGCCAGCAAGGGTGAAAAGCTCTACTTGCGCACGCGTAACGCCGC
GTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCCGACAATT
GGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCC
GAGCGCGAGAAGATGCTGGCCCGCATCGGAGGCTACCGGCCGAATGAGAC
TATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAACGAGGAGG
CGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAG
CGCGCCCAGGAAGCGAAATCGGAATTCGTCGACGACGACGTCCCCACCAA
GTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTCTCCGACG
AAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAA
TCCGACCTCGAAGTTACCTTCTCCTCCTACAACCAGCCCAGCAATAAGAA
GGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAATACTTCA
TGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGT
GTGCACTCCGGCACCAACGCCAACTTCGCACAGGCATCCCGCGACGCAGC
CATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCA
CCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAAC
GACGAGGACGGATCGAAGGGTACTCGTCTGGTGCGTGGTGAGAGTGGTGC
CAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGGAAGAAGG
GCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGT
CTGGGGGCGGACCTGAACCACTACCGCGGTGGTAGACGCTTCAAGCATAA
CAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGATTATGATA
AGATGAAGAAGAAGAATGAGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTC
GGAGGAGCCGCTGCGGGCGGTAAGAGTGAGCTGAAGGGTACGGATGATAT
TCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAATGCTCGAC
CGTCGAGGAAGAAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3526168..3528684+

>CAN33_47780-T1 ID=CAN33_47780-T1|Name=CAN33_47780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2517bp|location=Sequence derived from alignment at NKJJ01000022.1:3526168..3528684+ (Aspergillus niger FDAARGOS_311)
ATGGGGCTGAATGCGAACTTGTTGAAGGCCATCACAAGGAAGGGTTTCTC
GGTGCCGACACCTATTCAGCGCAAGACGATCCCAGTGGTTATGGAGGATC
AGGATGTCGTGGGCATGGCGCGCACGGGTTCCGGAAAGACCGCTGCGTTC
GTCATTCCCATGATTCAGAAGTTGAAGAGCCATAGCACCCAGGTTGGAGC
CCGTGGGCTGATCTTGTCGCCGTCGCGTGAGTTGGCGCTGCAGACTTTGA
AGGTCGTGAAGGAGCTTGGTAAGGGGACGGATCTCAAGGCGGTGTTGTTG
GTTGGTGGTGATAGTTTGGAGGAACAGTTCTCGATGATGGCTGGTAACCC
CGATATTGTGATTGCGACGCCCGGTCGGTTCCTGCACTTGAAGGTCGAAA
TGAACCTCGATTTGTCGAGTATCCGTTATGTTGTGTTCGATGAGGCCGAT
CGCCTGTTCGAAATGGGTTTCGCTGCTCAGTTGACCGAAATTCTTCACGG
CTTGCCGTCTACTCGCCAGACCCTGCTTTTCTCGGCTACCCTTCCCAAAT
CCCTGGTGGAATTCGCGCGCGCTGGTCTGCAGGAGCCTACGCTCGTTCGT
TTGGATACTGAGAGCAAGATCTCGCCGGATCTGCAGAATGCGTTCTTCTC
TGTCAAGTCCGGAGACAAGGAGGGCGCGCTGATGTATATCCTCCACAACG
TGATTAAGATGCCTACGGGTCCGACGGAGGCCGCGCAGCGCATGAAGGAA
GAGAACGCCAGTGGAAAGAGCTCGAAGTTCTCGAAGAAGCGGAAGCGATC
GGACGACAAAGCAATCAACTTTAAGGAGTCGCCCACGAAGCATTCCACGA
TCATTTTCGCCGCTACCAAGCACCACGTCGACTACTTGTACTCTCTGCTG
AACGAAGCCGGATTTGCGACATCCTACGCTTACGGTTCCCTCGACCAGAC
GGCTCGTAAAATCCAAGTGCACAACTTCCGTACCGGCATTTCGAACATCC
TGGTCGTCACTGACGTCGCAGCCAGAGGTATCGATATTCCCATTCTGGCC
AATGTCATCAACTACGACTTTCCCTCCCAAGCCAAGATCTTCGTCCACCG
TGTCGGTCGTACCGCGCGTGCTGGCCGCACCGGTTGGAGTTACAGTCTGG
TCCGCGATTCCGATGCCCCCTATCTGCTCGATCTGCAGCTGTTCCTCGGC
CGGCGACTGGTCCTCGGCCGGGAGCATGGCGACCAAGTCAACTTCGCCGA
GGATGTGGTCGTCGGAGGCTTCCCCCGCGACGGCCTGTCTCAGAGCTGCG
AGTGGGTGAACAAGGTCTTGGACGATACGGTAGATATCGCCGCGCAGCGT
TCCGTCGCCAGCAAGGGTGAAAAGCTCTACTTGCGCACGCGTAACGCCGC
GTCTCTGGAGAGTGCCAAGCGCTCGAAAGAGGTCGTTTCATCCGACAATT
GGACGGCCCTGCACCCCCTGTTCAACGACGAGACCAGTCAACTCGAAGCC
GAGCGCGAGAAGATGCTGGCCCGCATCGGAGGCTACCGGCCGAATGAGAC
TATCTTCGAAGTGAACAACCGCCGCAGCGGCAAGCCCGAGAACGAGGAGG
CGCTCACGACAATCAAGCGCGTCCGAACCACGCTCGACTCGAAGAAGAAG
CGCGCCCAGGAAGCGAAATCGGAATTCGTCGACGACGACGTCCCCACCAA
GTCCGGAGACGCTGACGCCGACGACGCCGAAGATGGTGCCTTCTCCGACG
AAGACGAAGCCGGCGAAGGCGCCGCCGACAACATGTCACTTGCATCGGAA
TCCGACCTCGAAGTTACCTTCTCCTCCTACAACCAGCCCAGCAATAAGAA
GGCCAAGAAAGAAGCCGGTGCCACCTCCTTCCAGAACCCCGAATACTTCA
TGTCCTACACCCCCAACAACACCAACATGGCCGAAGACCGCGCGTACGGT
GTGCACTCCGGCACCAACGCCAACTTCGCACAGGCATCCCGCGACGCAGC
CATGGATCTGCTCGGCGATGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCA
CCATGATGCGCTGGGACAAGCGTCACAAGAAGTACGTGTCGCGACAGAAC
GACGAGGACGGATCGAAGGGTACTCGTCTGGTGCGTGGTGAGAGTGGTGC
CAAGATCGCCGCCAGCTTCCGCAGTGGACGCTTCGACGCCTGGAAGAAGG
GCAAGCGACTGACTCGTCTGCCGCGTGTGGGTGAGGCCGAGACACCGGGT
CTGGGGGCGGACCTGAACCACTACCGCGGTGGTAGACGCTTCAAGCATAA
CAAGGAGCAGGCGCCGAAGCGGGCTGATCCGCTCCGCGGAGATTATGATA
AGATGAAGAAGAAGAATGAGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTC
GGAGGAGCCGCTGCGGGCGGTAAGAGTGAGCTGAAGGGTACGGATGATAT
TCGGTTAGCCAGGAATTTGAAGCAGAAGAGACGCGAGAAGAATGCTCGAC
CGTCGAGGAAGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0003723RNA binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP10CAN33_47780Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47780-T1.exon1CAN33_47780-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47780-T1.cdsCAN33_47780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47780-T1CAN33_47780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR012541
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
DBxrefPFAM:PF08147
ProductATP-dependent RNA helicase dbp10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3526168..3528684 +
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