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CAN33_47970-T1, CAN33_47970-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47970-T1
Unique NameCAN33_47970-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3640368..3641450+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47970-T1 ID=CAN33_47970-T1|Name=CAN33_47970-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1083bp|location=Sequence derived from alignment at NKJJ01000022.1:3640368..3641450+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACCCAGGGTGGTGC
AGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGATTCGGGCGCTCA
CACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTTCCAGAGGGATT
GAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTGGTAAAGGCCTT
TGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTTTGAGCCCTTCG
CAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATCAGCAAGGGGTC
AACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAGCTATACATTTG
GAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGCGGTTGTGGTGC
CCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCAAGCAGGACCAG
GTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTCTATACGTCCAA
CCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGGTAAGTTCGCCCTCCC
CGTGGAACTCTCCTTGTCGCCATGGCAGTAAACTCATTTTAACCCGCATT
GAACAGAATTCGATCGGCAAATTTGTCGCTTTCACTCCAGTGTCTGCACA
GACGAGGATTGCTTCCCTCGGTGCGATGTCTAATGTTGGTACTGCTGTTG
CAGGGCTAGTCGAGAATGATGGGCAGACTTTATGGACCAGCAAACTCGGC
GCTTCATCCAGTGGGGCCAAGTATGTCATCGTAACCACCACTTCTTATAC
TGTCCAGGACTACTACTCCGCATGGGCAAAAGCCATTGGAAAGGGTGAGG
ATCAGGTTAAGGTTCTGCCAATCTCCTTTGCGGACTACGAAGCTCTCTTT
GCGGAGTGGGGAACCGAGTTGGGCCTGATGATGAGATTTTGGGAAGTCGC
TGGGCCTGAGAAAAGCTGGGCTACTGTAGGACAGACTGACACCCTCATCG
ATAGCCGGGAATTGTTGGGGCCTTGCAAGACATTGGTCGAGACGGAGGAA
GCATTTGCTCAAGTCTCGTGGGACAACATATAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3640368..3641450+

>CAN33_47970-T1 ID=CAN33_47970-T1|Name=CAN33_47970-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2022bp|location=Sequence derived from alignment at NKJJ01000022.1:3640368..3641450+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACCCAGGGTGGTGC
AGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGATTCGGGCGCTCA
CACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTTCCAGAGGGATT
GAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTGGTAAAGGCCTT
TGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTTTGAGCCCTTCG
CAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATCAGCAAGGGGTC
AACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAGCTATACATTTG
GAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGCGGTTGTGGTGC
CCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCAAGCAGGACCAG
GTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTCTATACGTCCAA
CCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGAATTCGATCGGCAAAT
TTGTCGCTTTCACTCCAGTGTCTGCACAGACGAGGATTGCTTCCCTCGGT
GCGATGTCTAATGTTGGTACTGCTGTTGCAGGGCTAGTCGAGAATGATGG
GCAGACTTTATGGACCAGCAAACTCGGCGCTTCATCCAGTGGGGCCAAGT
ATGTCATCGTAACCACCACTTCTTATACTGTCCAGGACTACTACTCCGCA
TGGGCAAAAGCCATTGGAAAGGGTGAGGATCAGGTTAAGGTTCTGCCAAT
CTCCTTTGCGGACTACGAAGCTCTCTTTGCGGAGTGGGGAACCGAGTTGG
GCCTGATGATGAGATTTTGGGAAGTCGCTGGGCCTGAGAAAAGCTGGGCT
ACTGTAGGACAGACTGACACCCTCATCGATAGCCGGGAATTGTTGGGGCC
TTGCAAGACATTGGTCGAGACGGAGGAAGCATTTGCTCAAGTCTCGTGGG
ACAACATATAAATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACC
CAGGGTGGTGCAGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGAT
TCGGGCGCTCACACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTT
CCAGAGGGATTGAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTG
GTAAAGGCCTTTGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTT
TGAGCCCTTCGCAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATC
AGCAAGGGGTCAACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAG
CTATACATTTGGAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGC
GGTTGTGGTGCCCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCA
AGCAGGACCAGGTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTC
TATACGTCCAACCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGAATTC
GATCGGCAAATTTGTCGCTTTCACTCCAGTGTCTGCACAGACGAGGATTG
CTTCCCTCGGTGCGATGTCTAATGTTGGTACTGCTGTTGCAGGGCTAGTC
GAGAATGATGGGCAGACTTTATGGACCAGCAAACTCGGCGCTTCATCCAG
TGGGGCCAAGTATGTCATCGTAACCACCACTTCTTATACTGTCCAGGACT
ACTACTCCGCATGGGCAAAAGCCATTGGAAAGGGTGAGGATCAGGTTAAG
GTTCTGCCAATCTCCTTTGCGGACTACGAAGCTCTCTTTGCGGAGTGGGG
AACCGAGTTGGGCCTGATGATGAGATTTTGGGAAGTCGCTGGGCCTGAGA
AAAGCTGGGCTACTGTAGGACAGACTGACACCCTCATCGATAGCCGGGAA
TTGTTGGGGCCTTGCAAGACATTGGTCGAGACGGAGGAAGCATTTGCTCA
AGTCTCGTGGGACAACATATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47970CAN33_47970Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47970-T1.exon1CAN33_47970-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_47970-T1.exon2CAN33_47970-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47970-T1.cdsCAN33_47970-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47970-T1CAN33_47970-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
ProductNmrA-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3640368..3641450 +
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